FFCP PHASE1:Mm9::chr5:136201583..136201610,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18984|HGNC=|UniProt=F6R7H8|association_with_transcript=0bp_to_ENSMUST00000127096_5end|description=CAGE_peak_3_at_Por_5end|id=chr5:136201583..136201610,+|ontology_enrichment_celltype=CL:0000055!1.22e-08!50;CL:0000393!6.93e-07!39;CL:0000211!6.93e-07!39;CL:0002319!8.41e-07!43;CL:0000221!9.38e-07!44;CL:0000133!9.38e-07!44|ontology_enrichment_celltype_v019_2=CL:0002319,6.47e-08,43;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0000221,1.57e-07,44;CL:0000133,1.57e-07,44;CL:0002609,9.89e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.64e-12!102;UBERON:0000924!6.64e-12!102;UBERON:0006601!6.64e-12!102;UBERON:0003080!7.64e-12!40;UBERON:0002780!8.96e-12!39;UBERON:0001890!8.96e-12!39;UBERON:0006240!8.96e-12!39;UBERON:0003056!1.23e-11!49;UBERON:0000073!1.90e-11!75;UBERON:0001016!1.90e-11!75;UBERON:0001017!4.47e-11!73;UBERON:0005743!4.47e-11!73;UBERON:0000468!4.57e-10!333;UBERON:0000955!3.29e-09!50;UBERON:0006238!3.29e-09!50;UBERON:0000033!5.86e-09!63;UBERON:0002616!1.13e-08!49;UBERON:0002346!2.06e-08!71;UBERON:0003075!2.06e-08!71;UBERON:0007284!2.06e-08!71;UBERON:0001049!5.02e-08!52;UBERON:0005068!5.02e-08!52;UBERON:0006241!5.02e-08!52;UBERON:0007135!5.02e-08!52;UBERON:0000922!1.05e-07!328;UBERON:0002791!1.75e-07!29;UBERON:0003528!1.75e-07!29;UBERON:0001893!1.75e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0003080,1.46e-13,40;UBERON:0002780,1.86e-13,39;UBERON:0001890,1.86e-13,39;UBERON:0006240,1.86e-13,39;UBERON:0001016,7.29e-13,75;UBERON:0004121,8.97e-13,95;UBERON:0000924,8.97e-13,95;UBERON:0006601,8.97e-13,95;UBERON:0001017,2.19e-12,73;UBERON:0003056,2.93e-12,49;UBERON:0000955,3.72e-12,47;UBERON:0006238,3.72e-12,47;UBERON:0002616,2.04e-11,46;UBERON:0010371,6.11e-11,73;UBERON:0001049,1.41e-09,52;UBERON:0005068,1.41e-09,52;UBERON:0006241,1.41e-09,52;UBERON:0007135,1.41e-09,52;UBERON:0002346,2.22e-09,64;UBERON:0003075,2.22e-09,64;UBERON:0007284,2.22e-09,64;UBERON:0000073,8.40e-09,54;UBERON:0003528,1.81e-08,29;UBERON:0002791,1.81e-08,29;UBERON:0001893,1.81e-08,29;UBERON:0000007,1.57e-07,8;UBERON:0003296,1.57e-07,8;UBERON:0010133,1.57e-07,8;UBERON:0002020,5.83e-07,34|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,2.43304634926835,3.48738829107195,0,4.79655344036982,5.4921545683618,3.88859798148567,2.09979632438044,1.43752564364972,0,0,0,8.2323019531503,5.73066879877513,2.06268836910977,5.05791152148994,2.11596391708813,4.43681982454325,1.69422266034566,0,0.449949858640699,0.988866362566974,0,2.09720077362883,1.92109152660777,3.7328260431052,4.72520784160917,7.78202357000113,0,0.220868540951614,10.0442455356262,8.14686503655009,6.43453150627015,0,0.255374676170375,0.46081959976873,3.29715719325485,3.93396867490361,4.68822033501084,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,2.05039390407831,1.13589289999776,1.43585964202892,0,0,0.679971333707751,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0.593768556259299,1.38788261412909,0.304465478312141,0.922461989024234,0,0.823120949949934,0.753999547978053,0.247194967734374,3.47038456607788,0,0.647067399789637,0,1.45462575940567,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,1.04853447583376,2.74500361691176,5.40313714085317,2.43354048269187,1.79000820131231,1.24672826735736,0.811206315338788,3.36069900706044,0.248813941220186,0,0,2.60240885925407,1.83921683546778,1.62055916824814,1.35634336052144,0.612328492361951,0.640568601424249,0.749613796477831,0.517406741478031,7.97601573851516,3.59301552318857,3.69497360744293,3.28793598641362,2.78047249225598,0.696504333044333,2.46938563689532,1.99034266818493,0,0,0,0.621377317606506,0.938104239924385,0.540186184383045,0.473489471170421,0.787056926989615,0.925602677324269,0.232533944750408,0.268273401399619,0.583826711835847,1.15191894939436,0.820837320395476,0.729619285912702,1.46199987425332,1.75640092232841,0.402619256281115,1.89260953707715,1.54356918568927,0,0.528901133327089,5.54549451391608,3.94802342162745,1.41754207454303,0.403367049246685,1.11189021922435,1.14135375667535,0.474529061544512,1.64698954724011,1.25667604400135,0.994782360205754,1.55971269695296,0,1.08069024937347,1.1948476395262,1.13800740571849,0.913988100877831,0,0,0.775809948670503,0.420814919341911,0.252946148497029,0,0,0,0,0.667380422864376,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0.923765950833023,2.4633883530163,0.651859905768103,0.678980343100753,0.469380496577004,0.837531287209079,0.714130922658041,0.390267295715598,3.62560831444239,4.65075848262427,5.58091690301205,1.14704320301017,1.72684981865896,0.867894351489069,0,0,0,0.551873492609465,0.321101179975584,0.117211686592203,0,0.252470927204373,1.89304931649754,1.56175497718655,0.861693590931196,0.238968797952552,0.891194696329576,1.13230612315533,1.21443210502468,1.46127928955656,0.395287777946524,6.74774764485795,1.70328102249922,4.80777129901589,2.11753047159649,5.44401405809367,0,0.971122544619926,0.302323556964751,0.377210159511796,0.885905678642318,0.307435147943927,0.775284879504663,0.363533729477506,1.06949213515416,0.316036757935816,1.05418608574999,0,3.40439605753788,6.12207719706455,5.56242340265844,4.92975180572662,3.90148514013002,3.38900753443934,3.78462747384878,4.26250928760439,0.469343416127421,0,0.441056796109924,2.30840754118072,2.42196640043858,2.29189114726992,2.74556391207214,2.9545361954111,0.582961673259701,0.370850604021019,0.170870880797853,1.03193433981611,0,0,0,0,0,0,0,0.954670618015114,5.21954389408873,1.62655573701479,1.83609079397062,1.67270636811575,1.52853794622324,1.48350781023303,2.72756403893609,2.35580347785627,1.42576470620972,0,0,0.747582730219894,1.15820943319968,1.55560950675238,2.19571699912143,0.844780627453891,0.352071715937262,0,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0,0.605798699688886,0.228620419965,0.201652370273681,0,0,0,0.453460767230423,0.887943813496259,0.62799699626633,0.167884616364078,3.28422309854724,0.750729901804728,1.64836461840539,0.857473516316263,0,0.564751842617067,0,1.14579102687879,0,1.37016503954128,0.755393897389701,2.02506750069542,1.80128481289688,0.906284817968409,1.03552062350364,2.49089634202024,1.99512436700516,1.70733605754134,0.486213434136588,1.04806581313991,1.10306105070008,1.11123363900808,0,2.24643446714271,0.758091635291392,1.01391719956096,0.377252682772152,0.468207537349412,0.384150914429216,0.574354689556133,0.952587382566147,0.347652977834566,0.578727661391115,0.412085900803307,1.17759136107518,0.685738504770831,0.177475806159338,0.715308569841963,0.726732083161643,0.941093804153306,0.761531471025089,1.28049581010941,0.789209134313529,0.407412341537585,2.24456908663095,0.474540072496697,0.591026894253381,0,0.77468420592983,0.964533054905707,1.49886346762768,1.40358965067245,0.859484216193193,0.57386499620653,1.54413993383661,0.927471342481686|short_description=p3@Por}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18984 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6R7H8 | |||
|association_with_transcript=0bp_to_ENSMUST00000127096_5end | |||
|cluster_id=chr5:136201583..136201610,+ | |||
|description=CAGE_peak_3_at_Por_5end | |||
|id=chr5:136201583..136201610,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-08!50;CL:0000393!6.93e-07!39;CL:0000211!6.93e-07!39;CL:0002319!8.41e-07!43;CL:0000221!9.38e-07!44;CL:0000133!9.38e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.47e-08,43;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0000221,1.57e-07,44;CL:0000133,1.57e-07,44;CL:0002609,9.89e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.64e-12!102;UBERON:0000924!6.64e-12!102;UBERON:0006601!6.64e-12!102;UBERON:0003080!7.64e-12!40;UBERON:0002780!8.96e-12!39;UBERON:0001890!8.96e-12!39;UBERON:0006240!8.96e-12!39;UBERON:0003056!1.23e-11!49;UBERON:0000073!1.90e-11!75;UBERON:0001016!1.90e-11!75;UBERON:0001017!4.47e-11!73;UBERON:0005743!4.47e-11!73;UBERON:0000468!4.57e-10!333;UBERON:0000955!3.29e-09!50;UBERON:0006238!3.29e-09!50;UBERON:0000033!5.86e-09!63;UBERON:0002616!1.13e-08!49;UBERON:0002346!2.06e-08!71;UBERON:0003075!2.06e-08!71;UBERON:0007284!2.06e-08!71;UBERON:0001049!5.02e-08!52;UBERON:0005068!5.02e-08!52;UBERON:0006241!5.02e-08!52;UBERON:0007135!5.02e-08!52;UBERON:0000922!1.05e-07!328;UBERON:0002791!1.75e-07!29;UBERON:0003528!1.75e-07!29;UBERON:0001893!1.75e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003080,1.46e-13,40;UBERON:0002780,1.86e-13,39;UBERON:0001890,1.86e-13,39;UBERON:0006240,1.86e-13,39;UBERON:0001016,7.29e-13,75;UBERON:0004121,8.97e-13,95;UBERON:0000924,8.97e-13,95;UBERON:0006601,8.97e-13,95;UBERON:0001017,2.19e-12,73;UBERON:0003056,2.93e-12,49;UBERON:0000955,3.72e-12,47;UBERON:0006238,3.72e-12,47;UBERON:0002616,2.04e-11,46;UBERON:0010371,6.11e-11,73;UBERON:0001049,1.41e-09,52;UBERON:0005068,1.41e-09,52;UBERON:0006241,1.41e-09,52;UBERON:0007135,1.41e-09,52;UBERON:0002346,2.22e-09,64;UBERON:0003075,2.22e-09,64;UBERON:0007284,2.22e-09,64;UBERON:0000073,8.40e-09,54;UBERON:0003528,1.81e-08,29;UBERON:0002791,1.81e-08,29;UBERON:0001893,1.81e-08,29;UBERON:0000007,1.57e-07,8;UBERON:0003296,1.57e-07,8;UBERON:0010133,1.57e-07,8;UBERON:0002020,5.83e-07,34 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,2.43304634926835,3.48738829107195,0,4.79655344036982,5.4921545683618,3.88859798148567,2.09979632438044,1.43752564364972,0,0,0,8.2323019531503,5.73066879877513,2.06268836910977,5.05791152148994,2.11596391708813,4.43681982454325,1.69422266034566,0,0.449949858640699,0.988866362566974,0,2.09720077362883,1.92109152660777,3.7328260431052,4.72520784160917,7.78202357000113,0,0.220868540951614,10.0442455356262,8.14686503655009,6.43453150627015,0,0.255374676170375,0.46081959976873,3.29715719325485,3.93396867490361,4.68822033501084,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,2.05039390407831,1.13589289999776,1.43585964202892,0,0,0.679971333707751,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0.593768556259299,1.38788261412909,0.304465478312141,0.922461989024234,0,0.823120949949934,0.753999547978053,0.247194967734374,3.47038456607788,0,0.647067399789637,0,1.45462575940567,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,1.04853447583376,2.74500361691176,5.40313714085317,2.43354048269187,1.79000820131231,1.24672826735736,0.811206315338788,3.36069900706044,0.248813941220186,0,0,2.60240885925407,1.83921683546778,1.62055916824814,1.35634336052144,0.612328492361951,0.640568601424249,0.749613796477831,0.517406741478031,7.97601573851516,3.59301552318857,3.69497360744293,3.28793598641362,2.78047249225598,0.696504333044333,2.46938563689532,1.99034266818493,0,0,0,0.621377317606506,0.938104239924385,0.540186184383045,0.473489471170421,0.787056926989615,0.925602677324269,0.232533944750408,0.268273401399619,0.583826711835847,1.15191894939436,0.820837320395476,0.729619285912702,1.46199987425332,1.75640092232841,0.402619256281115,1.89260953707715,1.54356918568927,0,0.528901133327089,5.54549451391608,3.94802342162745,1.41754207454303,0.403367049246685,1.11189021922435,1.14135375667535,0.474529061544512,1.64698954724011,1.25667604400135,0.994782360205754,1.55971269695296,0,1.08069024937347,1.1948476395262,1.13800740571849,0.913988100877831,0,0,0.775809948670503,0.420814919341911,0.252946148497029,0,0,0,0,0.667380422864376,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0.923765950833023,2.4633883530163,0.651859905768103,0.678980343100753,0.469380496577004,0.837531287209079,0.714130922658041,0.390267295715598,3.62560831444239,4.65075848262427,5.58091690301205,1.14704320301017,1.72684981865896,0.867894351489069,0,0,0,0.551873492609465,0.321101179975584,0.117211686592203,0,0.252470927204373,1.89304931649754,1.56175497718655,0.861693590931196,0.238968797952552,0.891194696329576,1.13230612315533,1.21443210502468,1.46127928955656,0.395287777946524,6.74774764485795,1.70328102249922,4.80777129901589,2.11753047159649,5.44401405809367,0,0.971122544619926,0.302323556964751,0.377210159511796,0.885905678642318,0.307435147943927,0.775284879504663,0.363533729477506,1.06949213515416,0.316036757935816,1.05418608574999,0,3.40439605753788,6.12207719706455,5.56242340265844,4.92975180572662,3.90148514013002,3.38900753443934,3.78462747384878,4.26250928760439,0.469343416127421,0,0.441056796109924,2.30840754118072,2.42196640043858,2.29189114726992,2.74556391207214,2.9545361954111,0.582961673259701,0.370850604021019,0.170870880797853,1.03193433981611,0,0,0,0,0,0,0,0.954670618015114,5.21954389408873,1.62655573701479,1.83609079397062,1.67270636811575,1.52853794622324,1.48350781023303,2.72756403893609,2.35580347785627,1.42576470620972,0,0,0.747582730219894,1.15820943319968,1.55560950675238,2.19571699912143,0.844780627453891,0.352071715937262,0,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0,0.605798699688886,0.228620419965,0.201652370273681,0,0,0,0.453460767230423,0.887943813496259,0.62799699626633,0.167884616364078,3.28422309854724,0.750729901804728,1.64836461840539,0.857473516316263,0,0.564751842617067,0,1.14579102687879,0,1.37016503954128,0.755393897389701,2.02506750069542,1.80128481289688,0.906284817968409,1.03552062350364,2.49089634202024,1.99512436700516,1.70733605754134,0.486213434136588,1.04806581313991,1.10306105070008,1.11123363900808,0,2.24643446714271,0.758091635291392,1.01391719956096,0.377252682772152,0.468207537349412,0.384150914429216,0.574354689556133,0.952587382566147,0.347652977834566,0.578727661391115,0.412085900803307,1.17759136107518,0.685738504770831,0.177475806159338,0.715308569841963,0.726732083161643,0.941093804153306,0.761531471025089,1.28049581010941,0.789209134313529,0.407412341537585,2.24456908663095,0.474540072496697,0.591026894253381,0,0.77468420592983,0.964533054905707,1.49886346762768,1.40358965067245,0.859484216193193,0.57386499620653,1.54413993383661,0.927471342481686 | |||
|short_description=p3@Por | |||
}} |
Revision as of 19:31, 3 August 2015
Short description: | p3@Por |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Por_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000127096_5end |
EntrezGene: | 18984 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.47e-08 | 43 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
ectodermal cell | 1.57e-07 | 44 |
neurectodermal cell | 1.57e-07 | 44 |
neuron of cerebral cortex | 9.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
anterior neural tube | 1.46e-13 | 40 |
regional part of forebrain | 1.86e-13 | 39 |
forebrain | 1.86e-13 | 39 |
future forebrain | 1.86e-13 | 39 |
nervous system | 7.29e-13 | 75 |
ectoderm-derived structure | 8.97e-13 | 95 |
ectoderm | 8.97e-13 | 95 |
presumptive ectoderm | 8.97e-13 | 95 |
central nervous system | 2.19e-12 | 73 |
pre-chordal neural plate | 2.93e-12 | 49 |
brain | 3.72e-12 | 47 |
future brain | 3.72e-12 | 47 |
regional part of brain | 2.04e-11 | 46 |
ecto-epithelium | 6.11e-11 | 73 |
neural tube | 1.41e-09 | 52 |
neural rod | 1.41e-09 | 52 |
future spinal cord | 1.41e-09 | 52 |
neural keel | 1.41e-09 | 52 |
neurectoderm | 2.22e-09 | 64 |
neural plate | 2.22e-09 | 64 |
presumptive neural plate | 2.22e-09 | 64 |
regional part of nervous system | 8.40e-09 | 54 |
brain grey matter | 1.81e-08 | 29 |
regional part of telencephalon | 1.81e-08 | 29 |
telencephalon | 1.81e-08 | 29 |
pituitary gland | 1.57e-07 | 8 |
gland of diencephalon | 1.57e-07 | 8 |
neuroendocrine gland | 1.57e-07 | 8 |
gray matter | 5.83e-07 | 34 |