FFCP PHASE1:Mm9::chr7:105639067..105639106,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=326|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:105639067..105639106,+|id=chr7:105639067..105639106,+|ontology_enrichment_celltype=CL:0000222!1.29e-08!7;CL:0000680!1.32e-07!6;CL:0000183!1.32e-07!6;CL:0000187!1.32e-07!6;CL:0000056!1.32e-07!6|ontology_enrichment_celltype_v019_2=CL:0000222,3.04e-24,7;CL:0000680,5.82e-20,6;CL:0000187,5.82e-20,6;CL:0000056,5.82e-20,6;CL:0002092,1.54e-15,3;CL:0002540,1.54e-15,3;CL:0002494,1.92e-15,3;CL:0000737,1.92e-15,3;CL:0000746,1.92e-15,3;CL:0000513,1.92e-15,3;CL:0000355,2.84e-13,9;CL:0000219,1.00e-10,54;CL:0000723,1.85e-09,91;CL:0000048,1.85e-09,91;CL:0002320,7.95e-09,46;CL:0000134,7.95e-09,46;CL:0000034,1.01e-08,97;CL:0000192,4.48e-07,3;CL:0000359,4.48e-07,3;CL:0002539,4.48e-07,3;CL:0000514,4.48e-07,3;CL:0000215,4.80e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.84e-13,9;UBERON:0002036,2.84e-13,9;UBERON:0002385,2.84e-13,9;UBERON:0000486,2.84e-13,9;UBERON:0007503,2.84e-13,9;UBERON:0001015,2.84e-13,9;UBERON:0002329,2.84e-13,9;UBERON:0003082,2.84e-13,9;UBERON:0003059,2.84e-13,9;UBERON:0007282,2.84e-13,9;UBERON:0004290,2.84e-13,9;UBERON:0009618,2.84e-13,9;UBERON:0000383,6.24e-12,10;UBERON:0007524,7.84e-11,11;UBERON:0003077,7.84e-11,11;UBERON:0007285,7.84e-11,11;UBERON:0000055,6.10e-09,5;UBERON:0007500,6.10e-09,5;UBERON:0001981,6.10e-09,5;UBERON:0002049,6.10e-09,5;UBERON:0007798,6.10e-09,5;UBERON:0004537,6.10e-09,5;UBERON:0006965,6.10e-09,5;UBERON:0002384,7.95e-09,46;UBERON:0002204,9.42e-09,32;UBERON:0001135,4.48e-07,3;UBERON:0004237,4.48e-07,3;UBERON:0004695,4.48e-07,3;UBERON:0002111,4.48e-07,3;UBERON:0004178,4.48e-07,3;UBERON:0004535,4.57e-07,23;UBERON:0001009,4.57e-07,23|phase1_expression=0,0,0,0,0,0,0,4.64843964389675,0.563154888606667,0.234064526321993,1.71217968225505,0.8774937489487,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.912392380975631,5.32285581268876,3.9119567217402,0,0.219686182734472,0,0.419959264876088,0,0,0,0,16.4646039063006,6.5902691185914,2.06268836910977,0,0,0,2.71075625655306,0.889294796111139,4.49949858640699,10.8775299882367,6.3943210345149,0.299600110518405,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.151452386666368,1.20914496170857,2.6087803983151,0,0,0,0,0,0,1.53387290320252,1.03914401841148,1.06001872353102,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0.585400943573396,0.157635144106191,0.221464689648775,0,0,0,0.433947175744535,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,1.40803024838226,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0|short_description=p@chr7:105639067..105639106,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=326 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:105639067..105639106,+ | |||
|description=CAGE_peak_at_chr7:105639067..105639106,+ | |||
|id=chr7:105639067..105639106,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.29e-08!7;CL:0000680!1.32e-07!6;CL:0000183!1.32e-07!6;CL:0000187!1.32e-07!6;CL:0000056!1.32e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.04e-24,7;CL:0000680,5.82e-20,6;CL:0000187,5.82e-20,6;CL:0000056,5.82e-20,6;CL:0002092,1.54e-15,3;CL:0002540,1.54e-15,3;CL:0002494,1.92e-15,3;CL:0000737,1.92e-15,3;CL:0000746,1.92e-15,3;CL:0000513,1.92e-15,3;CL:0000355,2.84e-13,9;CL:0000219,1.00e-10,54;CL:0000723,1.85e-09,91;CL:0000048,1.85e-09,91;CL:0002320,7.95e-09,46;CL:0000134,7.95e-09,46;CL:0000034,1.01e-08,97;CL:0000192,4.48e-07,3;CL:0000359,4.48e-07,3;CL:0002539,4.48e-07,3;CL:0000514,4.48e-07,3;CL:0000215,4.80e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.84e-13,9;UBERON:0002036,2.84e-13,9;UBERON:0002385,2.84e-13,9;UBERON:0000486,2.84e-13,9;UBERON:0007503,2.84e-13,9;UBERON:0001015,2.84e-13,9;UBERON:0002329,2.84e-13,9;UBERON:0003082,2.84e-13,9;UBERON:0003059,2.84e-13,9;UBERON:0007282,2.84e-13,9;UBERON:0004290,2.84e-13,9;UBERON:0009618,2.84e-13,9;UBERON:0000383,6.24e-12,10;UBERON:0007524,7.84e-11,11;UBERON:0003077,7.84e-11,11;UBERON:0007285,7.84e-11,11;UBERON:0000055,6.10e-09,5;UBERON:0007500,6.10e-09,5;UBERON:0001981,6.10e-09,5;UBERON:0002049,6.10e-09,5;UBERON:0007798,6.10e-09,5;UBERON:0004537,6.10e-09,5;UBERON:0006965,6.10e-09,5;UBERON:0002384,7.95e-09,46;UBERON:0002204,9.42e-09,32;UBERON:0001135,4.48e-07,3;UBERON:0004237,4.48e-07,3;UBERON:0004695,4.48e-07,3;UBERON:0002111,4.48e-07,3;UBERON:0004178,4.48e-07,3;UBERON:0004535,4.57e-07,23;UBERON:0001009,4.57e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,4.64843964389675,0.563154888606667,0.234064526321993,1.71217968225505,0.8774937489487,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.912392380975631,5.32285581268876,3.9119567217402,0,0.219686182734472,0,0.419959264876088,0,0,0,0,16.4646039063006,6.5902691185914,2.06268836910977,0,0,0,2.71075625655306,0.889294796111139,4.49949858640699,10.8775299882367,6.3943210345149,0.299600110518405,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.151452386666368,1.20914496170857,2.6087803983151,0,0,0,0,0,0,1.53387290320252,1.03914401841148,1.06001872353102,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0.585400943573396,0.157635144106191,0.221464689648775,0,0,0,0.433947175744535,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,1.40803024838226,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr7:105639067..105639106,+ | |||
}} |
Latest revision as of 20:22, 3 August 2015
Short description: | p@chr7:105639067..105639106, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:105639067..105639106, + |
Coexpression cluster: | MCL_coexpression_mm9:326 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.04e-24 | 7 |
muscle precursor cell | 5.82e-20 | 6 |
muscle cell | 5.82e-20 | 6 |
myoblast | 5.82e-20 | 6 |
bone marrow cell | 1.54e-15 | 3 |
mesenchymal stem cell of the bone marrow | 1.54e-15 | 3 |
cardiocyte | 1.92e-15 | 3 |
striated muscle cell | 1.92e-15 | 3 |
cardiac muscle cell | 1.92e-15 | 3 |
cardiac muscle myoblast | 1.92e-15 | 3 |
multi-potent skeletal muscle stem cell | 2.84e-13 | 9 |
motile cell | 1.00e-10 | 54 |
somatic stem cell | 1.85e-09 | 91 |
multi fate stem cell | 1.85e-09 | 91 |
connective tissue cell | 7.95e-09 | 46 |
mesenchymal cell | 7.95e-09 | 46 |
stem cell | 1.01e-08 | 97 |
smooth muscle cell | 4.48e-07 | 3 |
vascular associated smooth muscle cell | 4.48e-07 | 3 |
aortic smooth muscle cell | 4.48e-07 | 3 |
smooth muscle myoblast | 4.48e-07 | 3 |
barrier cell | 4.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.84e-13 | 9 |
striated muscle tissue | 2.84e-13 | 9 |
muscle tissue | 2.84e-13 | 9 |
multilaminar epithelium | 2.84e-13 | 9 |
epithelial vesicle | 2.84e-13 | 9 |
musculature | 2.84e-13 | 9 |
somite | 2.84e-13 | 9 |
myotome | 2.84e-13 | 9 |
presomitic mesoderm | 2.84e-13 | 9 |
presumptive segmental plate | 2.84e-13 | 9 |
dermomyotome | 2.84e-13 | 9 |
trunk paraxial mesoderm | 2.84e-13 | 9 |
musculature of body | 6.24e-12 | 10 |
dense mesenchyme tissue | 7.84e-11 | 11 |
paraxial mesoderm | 7.84e-11 | 11 |
presumptive paraxial mesoderm | 7.84e-11 | 11 |
vessel | 6.10e-09 | 5 |
epithelial tube open at both ends | 6.10e-09 | 5 |
blood vessel | 6.10e-09 | 5 |
vasculature | 6.10e-09 | 5 |
vascular system | 6.10e-09 | 5 |
blood vasculature | 6.10e-09 | 5 |
vascular cord | 6.10e-09 | 5 |
connective tissue | 7.95e-09 | 46 |
musculoskeletal system | 9.42e-09 | 32 |
smooth muscle tissue | 4.48e-07 | 3 |
blood vessel smooth muscle | 4.48e-07 | 3 |
arterial system smooth muscle | 4.48e-07 | 3 |
artery smooth muscle tissue | 4.48e-07 | 3 |
aorta smooth muscle tissue | 4.48e-07 | 3 |
cardiovascular system | 4.57e-07 | 23 |
circulatory system | 4.57e-07 | 23 |