FFCP PHASE1:Mm9::chr10:109589324..109589329,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:109589324..109589329,- | |||
|description=CAGE_peak_at_chr10:109589324..109589329,- | |description=CAGE_peak_at_chr10:109589324..109589329,- | ||
|id=chr10:109589324..109589329,- | |id=chr10:109589324..109589329,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!6.80e-13!50;UBERON:0006238!6.80e-13!50;UBERON:0002616!2.79e-12!49;UBERON:0002021!1.23e-11!10;UBERON:0000411!1.23e-11!10;UBERON:0001950!1.23e-11!10;UBERON:0000033!1.31e-11!63;UBERON:0001049!1.65e-10!52;UBERON:0005068!1.65e-10!52;UBERON:0006241!1.65e-10!52;UBERON:0007135!1.65e-10!52;UBERON:0001017!2.93e-10!73;UBERON:0005743!2.93e-10!73;UBERON:0000073!2.96e-10!75;UBERON:0001016!2.96e-10!75;UBERON:0000956!3.16e-10!21;UBERON:0001869!3.16e-10!21;UBERON:0000203!3.16e-10!21;UBERON:0002346!3.56e-10!71;UBERON:0003075!3.56e-10!71;UBERON:0007284!3.56e-10!71;UBERON:0002791!6.47e-10!29;UBERON:0003528!6.47e-10!29;UBERON:0001893!6.47e-10!29;UBERON:0002780!1.64e-09!39;UBERON:0001890!1.64e-09!39;UBERON:0006240!1.64e-09!39;UBERON:0003056!1.87e-09!49;UBERON:0002020!3.48e-09!34;UBERON:0003080!4.57e-09!40;UBERON:0002619!5.83e-09!17;UBERON:0004121!3.48e-08!102;UBERON:0000924!3.48e-08!102;UBERON:0006601!3.48e-08!102 | |ontology_enrichment_uberon=UBERON:0000955!6.80e-13!50;UBERON:0006238!6.80e-13!50;UBERON:0002616!2.79e-12!49;UBERON:0002021!1.23e-11!10;UBERON:0000411!1.23e-11!10;UBERON:0001950!1.23e-11!10;UBERON:0000033!1.31e-11!63;UBERON:0001049!1.65e-10!52;UBERON:0005068!1.65e-10!52;UBERON:0006241!1.65e-10!52;UBERON:0007135!1.65e-10!52;UBERON:0001017!2.93e-10!73;UBERON:0005743!2.93e-10!73;UBERON:0000073!2.96e-10!75;UBERON:0001016!2.96e-10!75;UBERON:0000956!3.16e-10!21;UBERON:0001869!3.16e-10!21;UBERON:0000203!3.16e-10!21;UBERON:0002346!3.56e-10!71;UBERON:0003075!3.56e-10!71;UBERON:0007284!3.56e-10!71;UBERON:0002791!6.47e-10!29;UBERON:0003528!6.47e-10!29;UBERON:0001893!6.47e-10!29;UBERON:0002780!1.64e-09!39;UBERON:0001890!1.64e-09!39;UBERON:0006240!1.64e-09!39;UBERON:0003056!1.87e-09!49;UBERON:0002020!3.48e-09!34;UBERON:0003080!4.57e-09!40;UBERON:0002619!5.83e-09!17;UBERON:0004121!3.48e-08!102;UBERON:0000924!3.48e-08!102;UBERON:0006601!3.48e-08!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.26e-51,10;UBERON:0000411,3.26e-51,10;UBERON:0001950,3.26e-51,10;UBERON:0002619,5.07e-30,17;UBERON:0000956,3.07e-24,21;UBERON:0001869,3.07e-24,21;UBERON:0000203,3.07e-24,21;UBERON:0003528,1.92e-17,29;UBERON:0002791,1.92e-17,29;UBERON:0001893,1.92e-17,29;UBERON:0002020,8.22e-15,34;UBERON:0002780,7.52e-13,39;UBERON:0001890,7.52e-13,39;UBERON:0006240,7.52e-13,39;UBERON:0003080,1.62e-12,40;UBERON:0000073,1.57e-11,54;UBERON:0002616,8.15e-11,46;UBERON:0000955,1.42e-10,47;UBERON:0006238,1.42e-10,47;UBERON:0003056,4.05e-10,49;UBERON:0001049,1.67e-09,52;UBERON:0005068,1.67e-09,52;UBERON:0006241,1.67e-09,52;UBERON:0007135,1.67e-09,52;UBERON:0001851,6.33e-09,1;UBERON:0005889,6.33e-09,1;UBERON:0001017,2.38e-08,73;UBERON:0001016,4.16e-08,75;UBERON:0002346,1.31e-07,64;UBERON:0003075,1.31e-07,64;UBERON:0007284,1.31e-07,64 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0.365950574409639,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0.251308704225729,0.695297280769106,1.02286182932132,0.62336413367868,0.162241263067758,0,0.248813941220186,0,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.925602677324269,0.232533944750408,0,0.350296027101508,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,4.14292712856459,3.43737308063638,3.78077001156113,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,2.71885445390523,2.5888015587591,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.754505365544305,0.187283014939765,0.320125762024346,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.147198920134397,1.02860775715625,0.354951612318675,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0.789209134313529,0.135804113845862,0,0.118635018124174,0.492522411877817,0.409231043169689,0.309873682371932,0,0.749431733813838,0.233931608445408,0,0.382576664137687,0,0 | ||
|short_description=p@chr10:109589324..109589329,- | |short_description=p@chr10:109589324..109589329,- | ||
}} | }} |
Latest revision as of 20:40, 3 August 2015
Short description: | p@chr10:109589324..109589329, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:109589324..109589329, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.26e-51 | 10 |
visual cortex | 3.26e-51 | 10 |
neocortex | 3.26e-51 | 10 |
regional part of cerebral cortex | 5.07e-30 | 17 |
cerebral cortex | 3.07e-24 | 21 |
cerebral hemisphere | 3.07e-24 | 21 |
pallium | 3.07e-24 | 21 |
brain grey matter | 1.92e-17 | 29 |
regional part of telencephalon | 1.92e-17 | 29 |
telencephalon | 1.92e-17 | 29 |
gray matter | 8.22e-15 | 34 |
regional part of forebrain | 7.52e-13 | 39 |
forebrain | 7.52e-13 | 39 |
future forebrain | 7.52e-13 | 39 |
anterior neural tube | 1.62e-12 | 40 |
regional part of nervous system | 1.57e-11 | 54 |
regional part of brain | 8.15e-11 | 46 |
brain | 1.42e-10 | 47 |
future brain | 1.42e-10 | 47 |
pre-chordal neural plate | 4.05e-10 | 49 |
neural tube | 1.67e-09 | 52 |
neural rod | 1.67e-09 | 52 |
future spinal cord | 1.67e-09 | 52 |
neural keel | 1.67e-09 | 52 |
cortex | 6.33e-09 | 1 |
zygote cortex | 6.33e-09 | 1 |
central nervous system | 2.38e-08 | 73 |
nervous system | 4.16e-08 | 75 |
neurectoderm | 1.31e-07 | 64 |
neural plate | 1.31e-07 | 64 |
presumptive neural plate | 1.31e-07 | 64 |