FFCP PHASE1:Mm9::chr8:50515982..50515986,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1448 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:50515982..50515986,- | |||
|description=CAGE_peak_at_chr8:50515982..50515986,- | |description=CAGE_peak_at_chr8:50515982..50515986,- | ||
|id=chr8:50515982..50515986,- | |id=chr8:50515982..50515986,- | ||
|ontology_enrichment_celltype=CL:0000540!1.70e-10!33;CL:0000047!1.70e-10!33;CL:0000031!1.70e-10!33;CL:0000404!1.70e-10!33;CL:0000117!1.63e-08!23;CL:0000337!1.63e-08!23;CL:0000393!1.61e-07!39;CL:0000211!1.61e-07!39 | |ontology_enrichment_celltype=CL:0000540!1.70e-10!33;CL:0000047!1.70e-10!33;CL:0000031!1.70e-10!33;CL:0000404!1.70e-10!33;CL:0000117!1.63e-08!23;CL:0000337!1.63e-08!23;CL:0000393!1.61e-07!39;CL:0000211!1.61e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.58e-12,33;CL:0000047,4.58e-12,33;CL:0000031,4.58e-12,33;CL:0000404,4.58e-12,33;CL:0000393,5.61e-10,39;CL:0000211,5.61e-10,39;CL:0002319,6.59e-09,43;CL:0000117,9.67e-09,23;CL:0000337,9.67e-09,23;CL:0000221,1.14e-08,44;CL:0000133,1.14e-08,44;CL:0002614,3.46e-07,3;CL:0002612,4.56e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.04e-09!73;UBERON:0005743!1.04e-09!73;UBERON:0004121!2.30e-09!102;UBERON:0000924!2.30e-09!102;UBERON:0006601!2.30e-09!102;UBERON:0000073!4.51e-09!75;UBERON:0001016!4.51e-09!75;UBERON:0002346!1.26e-08!71;UBERON:0003075!1.26e-08!71;UBERON:0007284!1.26e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.45e-13,73;UBERON:0001016,9.10e-13,75;UBERON:0002950,2.72e-11,4;UBERON:0001891,2.72e-11,4;UBERON:0009616,2.72e-11,4;UBERON:0010286,2.72e-11,4;UBERON:0004121,4.77e-11,95;UBERON:0000924,4.77e-11,95;UBERON:0006601,4.77e-11,95;UBERON:0000073,2.86e-08,54;UBERON:0002038,3.46e-07,3;UBERON:0009663,3.46e-07,3;UBERON:0009661,3.46e-07,3;UBERON:0000125,3.46e-07,3;UBERON:0002308,3.46e-07,3;UBERON:0002257,4.56e-07,3;UBERON:0000013,4.88e-07,3;UBERON:0002346,7.78e-07,64;UBERON:0003075,7.78e-07,64;UBERON:0007284,7.78e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,0.638436690425939,1.0752457327937,0.395658863190582,0.457438218012048,0.52091337055676,0.279182999001381,2.25105044012672,2.13917546887534,2.06240009831567,1.85083185038834,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0.304465478312141,0,0.301445281105245,1.29347577849275,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0.628340120440365,0,0,0,0,4.04434726393021,0,0.125654352112864,0.521472960576829,0.255715457330331,1.24672826735736,1.1356888414743,0.509196819251581,0,0.252722758433675,0.631325567659422,0,0.229902104433473,0,0.60281927134286,0.884474488967262,0.896796041993948,0.374806898238915,3.10444044886819,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0.995171334092466,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.350296027101508,0,0,0,0,0,0,0.841159794256509,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0,0.456994050438915,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0.393117990226406,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.05490517932983,0,0,1.26203287766503,0,0,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,3.79932615284705,1.18586333383957,4.81981974632711,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0.406638934253697,0.324016022465404,0.418176592028937,0.655087691238533,0.674321731924103,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.483168241652012,0.864090018773596,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.859265911718438,0,0,0,0,0,0,0,0,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,1.26348605881899,0.760437899670719,0.565879024158229,0.468207537349412,0.448176066834085,0.861532034334199,0.476293691283074,0.811190281613988,0.578727661391115,0,0.294397840268795,0.685738504770831,0.532427418478012,0.715308569841963,0.726732083161643,0.564656282491984,0.676916863133412,1.09756783723664,0.789209134313529,0.543216455383447,0.561142271657738,0.474540072496697,0.0985044823755635,0.409231043169689,0.77468420592983,0.385813221962283,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,0.638436690425939,1.0752457327937,0.395658863190582,0.457438218012048,0.52091337055676,0.279182999001381,2.25105044012672,2.13917546887534,2.06240009831567,1.85083185038834,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0.304465478312141,0,0.301445281105245,1.29347577849275,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0.628340120440365,0,0,0,0,4.04434726393021,0,0.125654352112864,0.521472960576829,0.255715457330331,1.24672826735736,1.1356888414743,0.509196819251581,0,0.252722758433675,0.631325567659422,0,0.229902104433473,0,0.60281927134286,0.884474488967262,0.896796041993948,0.374806898238915,3.10444044886819,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0.995171334092466,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.350296027101508,0,0,0,0,0,0,0.841159794256509,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0,0.456994050438915,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0.393117990226406,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.05490517932983,0,0,1.26203287766503,0,0,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,3.79932615284705,1.18586333383957,4.81981974632711,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0.406638934253697,0.324016022465404,0.418176592028937,0.655087691238533,0.674321731924103,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.483168241652012,0.864090018773596,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.859265911718438,0,0,0,0,0,0,0,0,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,1.26348605881899,0.760437899670719,0.565879024158229,0.468207537349412,0.448176066834085,0.861532034334199,0.476293691283074,0.811190281613988,0.578727661391115,0,0.294397840268795,0.685738504770831,0.532427418478012,0.715308569841963,0.726732083161643,0.564656282491984,0.676916863133412,1.09756783723664,0.789209134313529,0.543216455383447,0.561142271657738,0.474540072496697,0.0985044823755635,0.409231043169689,0.77468420592983,0.385813221962283,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr8:50515982..50515986,- | |short_description=p@chr8:50515982..50515986,- | ||
}} | }} |
Latest revision as of 21:46, 3 August 2015
Short description: | p@chr8:50515982..50515986, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:50515982..50515986, - |
Coexpression cluster: | MCL_coexpression_mm9:1448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.58e-12 | 33 |
neuronal stem cell | 4.58e-12 | 33 |
neuroblast | 4.58e-12 | 33 |
electrically signaling cell | 4.58e-12 | 33 |
electrically responsive cell | 5.61e-10 | 39 |
electrically active cell | 5.61e-10 | 39 |
neural cell | 6.59e-09 | 43 |
CNS neuron (sensu Vertebrata) | 9.67e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.67e-09 | 23 |
ectodermal cell | 1.14e-08 | 44 |
neurectodermal cell | 1.14e-08 | 44 |
neuron of the substantia nigra | 3.46e-07 | 3 |
neuron of the ventral spinal cord | 4.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.45e-13 | 73 |
nervous system | 9.10e-13 | 75 |
regional part of midbrain | 2.72e-11 | 4 |
midbrain | 2.72e-11 | 4 |
presumptive midbrain | 2.72e-11 | 4 |
midbrain neural tube | 2.72e-11 | 4 |
ectoderm-derived structure | 4.77e-11 | 95 |
ectoderm | 4.77e-11 | 95 |
presumptive ectoderm | 4.77e-11 | 95 |
regional part of nervous system | 2.86e-08 | 54 |
substantia nigra | 3.46e-07 | 3 |
telencephalic nucleus | 3.46e-07 | 3 |
midbrain nucleus | 3.46e-07 | 3 |
neural nucleus | 3.46e-07 | 3 |
nucleus of brain | 3.46e-07 | 3 |
ventral horn of spinal cord | 4.56e-07 | 3 |
sympathetic nervous system | 4.88e-07 | 3 |
neurectoderm | 7.78e-07 | 64 |
neural plate | 7.78e-07 | 64 |
presumptive neural plate | 7.78e-07 | 64 |