FFCP PHASE1:Mm9::chr5:145532196..145532209,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=234 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:145532196..145532209,+ | |||
|description=CAGE_peak_at_chr5:145532196..145532209,+ | |description=CAGE_peak_at_chr5:145532196..145532209,+ | ||
|id=chr5:145532196..145532209,+ | |id=chr5:145532196..145532209,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.17e-13!43;CL:0000540!7.67e-13!33;CL:0000047!7.67e-13!33;CL:0000031!7.67e-13!33;CL:0000404!7.67e-13!33;CL:0000117!2.02e-12!23;CL:0000337!2.02e-12!23;CL:0000221!3.10e-12!44;CL:0000133!3.10e-12!44;CL:0000055!7.96e-12!50;CL:0000393!1.52e-11!39;CL:0000211!1.52e-11!39;CL:0000723!1.91e-08!91;CL:0000048!1.91e-08!91;CL:0000034!2.25e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.21e-14,43;CL:0000540,7.69e-14,33;CL:0000047,7.69e-14,33;CL:0000031,7.69e-14,33;CL:0000404,7.69e-14,33;CL:0000221,1.45e-13,44;CL:0000133,1.45e-13,44;CL:0000117,4.26e-13,23;CL:0000337,4.26e-13,23;CL:0000393,6.19e-12,39;CL:0000211,6.19e-12,39;CL:0000723,5.93e-10,91;CL:0000048,5.93e-10,91;CL:0000034,1.56e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.28e-25!73;UBERON:0005743!1.28e-25!73;UBERON:0000073!9.08e-24!75;UBERON:0001016!9.08e-24!75;UBERON:0001049!1.63e-18!52;UBERON:0005068!1.63e-18!52;UBERON:0006241!1.63e-18!52;UBERON:0007135!1.63e-18!52;UBERON:0004121!1.73e-18!102;UBERON:0000924!1.73e-18!102;UBERON:0006601!1.73e-18!102;UBERON:0000955!3.16e-18!50;UBERON:0006238!3.16e-18!50;UBERON:0002616!1.33e-17!49;UBERON:0002020!3.79e-17!34;UBERON:0002346!5.59e-16!71;UBERON:0003075!5.59e-16!71;UBERON:0007284!5.59e-16!71;UBERON:0000033!8.02e-15!63;UBERON:0002791!1.08e-14!29;UBERON:0003528!1.08e-14!29;UBERON:0001893!1.08e-14!29;UBERON:0003080!9.68e-14!40;UBERON:0002780!3.43e-13!39;UBERON:0001890!3.43e-13!39;UBERON:0006240!3.43e-13!39;UBERON:0003056!2.87e-12!49;UBERON:0000025!1.66e-11!114;UBERON:0007811!3.77e-11!86;UBERON:0000956!6.53e-11!21;UBERON:0001869!6.53e-11!21;UBERON:0000203!6.53e-11!21;UBERON:0000153!2.24e-10!94;UBERON:0004111!9.11e-10!122;UBERON:0002619!2.09e-09!17;UBERON:0002021!1.20e-07!10;UBERON:0000411!1.20e-07!10;UBERON:0001950!1.20e-07!10;UBERON:0000480!2.80e-07!308;UBERON:0000467!2.80e-07!308;UBERON:0000477!2.96e-07!154;UBERON:0000923!3.67e-07!314;UBERON:0005291!3.67e-07!314;UBERON:0006598!3.67e-07!314;UBERON:0002532!3.67e-07!314;UBERON:0002050!9.10e-07!317;UBERON:0005423!9.10e-07!317 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.77e-27,73;UBERON:0001016,1.75e-25,75;UBERON:0000073,3.45e-21,54;UBERON:0004121,3.68e-20,95;UBERON:0000924,3.68e-20,95;UBERON:0006601,3.68e-20,95;UBERON:0001049,1.99e-19,52;UBERON:0005068,1.99e-19,52;UBERON:0006241,1.99e-19,52;UBERON:0007135,1.99e-19,52;UBERON:0002020,4.07e-18,34;UBERON:0002346,1.54e-17,64;UBERON:0003075,1.54e-17,64;UBERON:0007284,1.54e-17,64;UBERON:0000955,5.95e-17,47;UBERON:0006238,5.95e-17,47;UBERON:0002616,2.61e-16,46;UBERON:0003528,1.65e-15,29;UBERON:0002791,1.65e-15,29;UBERON:0001893,1.65e-15,29;UBERON:0003080,2.30e-14,40;UBERON:0002780,8.80e-14,39;UBERON:0001890,8.80e-14,39;UBERON:0006240,8.80e-14,39;UBERON:0010371,2.01e-13,73;UBERON:0003056,3.29e-12,49;UBERON:0010314,1.41e-11,92;UBERON:0000956,1.71e-11,21;UBERON:0001869,1.71e-11,21;UBERON:0000203,1.71e-11,21;UBERON:0000025,1.19e-10,114;UBERON:0002619,6.80e-10,17;UBERON:0004111,2.24e-09,122;UBERON:0005423,7.88e-09,304;UBERON:0000923,2.86e-08,291;UBERON:0010316,2.86e-08,291;UBERON:0005291,2.86e-08,291;UBERON:0006598,2.86e-08,291;UBERON:0010317,2.86e-08,291;UBERON:0002532,2.86e-08,291;UBERON:0002021,5.02e-08,10;UBERON:0000411,5.02e-08,10;UBERON:0001950,5.02e-08,10;UBERON:0002050,1.03e-07,294;UBERON:0011216,4.25e-07,194 | |||
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0,2.84071311571468,4.22366166455,7.49006484230379,2.39705155515707,1.59544317990673,2.73921167889929,2.18551006047494,7.99463428357591,0.607425802169478,4.89693314689703,3.47008381894061,3.29074640653773,2.12194825899015,3.57181818634493,0.198581902401771,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0.570070258369122,0,0.221730510655305,6.98533740805594,4.92051830067656,0,0.288851619751275,0,0,0,0,0,0,0,0.971020706062307,0.755380907853464,0.811015449756117,1.28482726513177,5.47673941043627,3.70642765846759,4.39372365468944,5.8328969722285,4.19959264876088,4.31257693094915,3.35565212115473,13.0565185562042,22.5182845425451,3.34437266846731,1.43266719969378,5.67239301505187,7.08107613008592,15.340738398889,18.3811107016792,2.71075625655306,4.4464739805557,17.997994345628,44.4989863155138,31.2611250576284,9.28760342607055,10.373894243682,5.49554945234932,9.18040380655497,9.67494822216357,9.99778445413313,13.9147180799517,5.26710436624302,6.03826467414889,14.7075005857603,98.0031340894559,63.2052323521679,77.5712992944029,9.89147157976454,9.88066550906024,10.4182674111352,100.785062639499,162.638394299155,114.445887584831,27.9897156199984,9.96601765593721,8.38797506213853,0.37863096666592,0.151143120213571,1.15945795480671,0.860423876981386,6.79971333707751,13.4925797909454,16.2444104361917,4.48026887097336,1.54488862144927,0.170430322578058,1.55871602761721,2.12003744706204,0,0,0,0,1.94841936910093,1.01343946190039,0,2.51204535381932,1.29468941823586,5.04703272820404,0.693941307064543,1.21786191324856,0.691846491768175,0.904335843315735,2.93971767839262,1.63366568728578,3.46072954828123,1.3013942122792,0,0.808834249737046,1.32504911076236,2.42437626567611,1.86391761218122,21.6657789788545,6.49284791121711,1.02182822083437,0.359445373517761,0,0.508280908292259,17.2259235315546,20.1300265240196,2.01046963380583,11.6462294528825,5.11430914660661,13.714010940931,10.5456820994042,2.24046600470696,1.24406970610093,4.29628689337247,14.5204880561667,0.910843100738926,0.229902104433473,0.720248519221397,0.753524089178575,1.90502197623718,3.07472928683639,1.68663104207512,13.7112786491678,0,1.32374256117473,2.11141348996739,1.31517439456545,2.22437799380478,2.43776516565517,1.23469281844766,1.79130840136644,0,0.257347907114715,0,0.414251545071004,1.40715635988658,0.900310307305074,0.710234206755631,0.393528463494808,1.54267112887378,2.55787339225449,0.804820204198858,3.03589890154641,1.97471819896177,4.43252153013557,1.4592385718254,1.60819986167866,0.878200461164203,1.34206418760372,17.0334858336943,2.77842453424068,1.32167513193519,0.528901133327089,0.853153002140936,2.55460339046482,0.77320476793256,1.21010114774006,0.667134131534611,1.14135375667535,1.42358718463353,0.658795818896044,1.00534083520108,0.596869416123452,1.55971269695296,6.29173586057955,7.3486936957396,3.58454291857861,0.379335801906163,1.02823661348756,0,2.24016460629846,2.13347735884388,3.71719845418688,2.59269802209455,4.28069429140846,6.12295038581362,2.34454611451421,1.48226313543574,0.500535317148282,0.393117990226406,0.224862112384854,0,0.482354319504834,0.25462585178142,0.575392274901621,1.29708181420028,1.09824565275233,15.814502718009,1.11642284300551,0.936113019343682,1.76805214562978,0.538192240565737,0,8.86815312799702,0,0.977789858652155,0.848725428875941,2.34690248288502,1.67506257441816,1.90434912708811,5.85400943573396,1.89162172927429,4.65075848262427,4.9430978283821,7.53771247692395,4.48980952851328,3.18227928879325,13.5712155545345,6.52686820582452,2.95058563811422,5.51873492609465,4.97706828962155,3.7507739709505,0.163934945376675,0,4.73262329124385,1.17131623288992,7.97066571611356,4.30143836314594,7.12955757063661,3.11384183867716,4.85772842009873,11.1057226006299,8.30104333687699,23.4564560987919,4.68402281187286,3.02711526234334,1.14020871547503,3.62934270539578,0,1.69946445308487,0.906970670894253,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,0,1.58018378967908,0,0,11.5749465956288,0.36012218806262,1.29358683782755,0.643011105094777,1.06404140185364,2.49716344642899,2.63278432963394,1.522324745573,0.704015124191131,3.1774810629573,0.441056796109924,0.8244312647074,0.645857706783622,0.361877549568935,0,0.656563598980245,4.37221254944776,8.90041449650446,3.93003025835061,0.82554747185289,0.925972636848558,1.31857919903284,1.0935538217682,0,1.18984900995699,1.6794174278839,0.552799895217695,0.954670618015114,0.949007980743406,0,0.756037385752609,1.46361807210128,1.09181281873089,1.88810084938749,0.495920734352016,1.04702376793612,1.42576470620972,7.45607175704311,10.7101658349996,0.598066184175915,0.330916980914195,1.94451188344048,1.16243841129958,2.19642963138012,3.63807439801837,4.1665403150064,4.19437377702843,16.6693043369944,10.0810502190253,4.74016680942267,0.608175645870493,0.308132871494482,0.909445760844565,0.716106782669926,1.39076948346885,1.32214994471966,0.738447635872886,1.31256384932592,1.752756553065,0.806609481094724,3.31356794515158,2.40529604100824,2.92192255453922,1.13365191807606,1.10992976687032,0.269141569828427,0.839423081820392,1.9318959403219,0.563047426353546,2.01466786693992,1.2862102744744,0,25.413832917768,17.4923589872727,17.7597609166213,29.9024537278016,47.2706938641743,48.3452094329408,45.226507515531,55.3895079965791,55.7365163050572,48.1517089929193,0,3.59122386060928,0.170733605754134,2.43106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0,0.936415074698824,0.192075457214608,0.574354689556133,0.476293691283074,0.579421629724277,0.77163688185482,1.23625770240992,0.147198920134397,1.71434626192708,0.70990322463735,0.715308569841963,0.726732083161643,0,0.507687647350059,0.182927972872773,2.63069711437843,0.950628796921032,1.12228454331548,0.118635018124174,1.18205378850676,1.22769312950907,0.154936841185966,0.385813221962283,0.249810577937946,1.16965804222704,0.429742108096597,1.72159498861959,0.220591419119515,1.62307484934295 | |phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0,2.84071311571468,4.22366166455,7.49006484230379,2.39705155515707,1.59544317990673,2.73921167889929,2.18551006047494,7.99463428357591,0.607425802169478,4.89693314689703,3.47008381894061,3.29074640653773,2.12194825899015,3.57181818634493,0.198581902401771,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0.570070258369122,0,0.221730510655305,6.98533740805594,4.92051830067656,0,0.288851619751275,0,0,0,0,0,0,0,0.971020706062307,0.755380907853464,0.811015449756117,1.28482726513177,5.47673941043627,3.70642765846759,4.39372365468944,5.8328969722285,4.19959264876088,4.31257693094915,3.35565212115473,13.0565185562042,22.5182845425451,3.34437266846731,1.43266719969378,5.67239301505187,7.08107613008592,15.340738398889,18.3811107016792,2.71075625655306,4.4464739805557,17.997994345628,44.4989863155138,31.2611250576284,9.28760342607055,10.373894243682,5.49554945234932,9.18040380655497,9.67494822216357,9.99778445413313,13.9147180799517,5.26710436624302,6.03826467414889,14.7075005857603,98.0031340894559,63.2052323521679,77.5712992944029,9.89147157976454,9.88066550906024,10.4182674111352,100.785062639499,162.638394299155,114.445887584831,27.9897156199984,9.96601765593721,8.38797506213853,0.37863096666592,0.151143120213571,1.15945795480671,0.860423876981386,6.79971333707751,13.4925797909454,16.2444104361917,4.48026887097336,1.54488862144927,0.170430322578058,1.55871602761721,2.12003744706204,0,0,0,0,1.94841936910093,1.01343946190039,0,2.51204535381932,1.29468941823586,5.04703272820404,0.693941307064543,1.21786191324856,0.691846491768175,0.904335843315735,2.93971767839262,1.63366568728578,3.46072954828123,1.3013942122792,0,0.808834249737046,1.32504911076236,2.42437626567611,1.86391761218122,21.6657789788545,6.49284791121711,1.02182822083437,0.359445373517761,0,0.508280908292259,17.2259235315546,20.1300265240196,2.01046963380583,11.6462294528825,5.11430914660661,13.714010940931,10.5456820994042,2.24046600470696,1.24406970610093,4.29628689337247,14.5204880561667,0.910843100738926,0.229902104433473,0.720248519221397,0.753524089178575,1.90502197623718,3.07472928683639,1.68663104207512,13.7112786491678,0,1.32374256117473,2.11141348996739,1.31517439456545,2.22437799380478,2.43776516565517,1.23469281844766,1.79130840136644,0,0.257347907114715,0,0.414251545071004,1.40715635988658,0.900310307305074,0.710234206755631,0.393528463494808,1.54267112887378,2.55787339225449,0.804820204198858,3.03589890154641,1.97471819896177,4.43252153013557,1.4592385718254,1.60819986167866,0.878200461164203,1.34206418760372,17.0334858336943,2.77842453424068,1.32167513193519,0.528901133327089,0.853153002140936,2.55460339046482,0.77320476793256,1.21010114774006,0.667134131534611,1.14135375667535,1.42358718463353,0.658795818896044,1.00534083520108,0.596869416123452,1.55971269695296,6.29173586057955,7.3486936957396,3.58454291857861,0.379335801906163,1.02823661348756,0,2.24016460629846,2.13347735884388,3.71719845418688,2.59269802209455,4.28069429140846,6.12295038581362,2.34454611451421,1.48226313543574,0.500535317148282,0.393117990226406,0.224862112384854,0,0.482354319504834,0.25462585178142,0.575392274901621,1.29708181420028,1.09824565275233,15.814502718009,1.11642284300551,0.936113019343682,1.76805214562978,0.538192240565737,0,8.86815312799702,0,0.977789858652155,0.848725428875941,2.34690248288502,1.67506257441816,1.90434912708811,5.85400943573396,1.89162172927429,4.65075848262427,4.9430978283821,7.53771247692395,4.48980952851328,3.18227928879325,13.5712155545345,6.52686820582452,2.95058563811422,5.51873492609465,4.97706828962155,3.7507739709505,0.163934945376675,0,4.73262329124385,1.17131623288992,7.97066571611356,4.30143836314594,7.12955757063661,3.11384183867716,4.85772842009873,11.1057226006299,8.30104333687699,23.4564560987919,4.68402281187286,3.02711526234334,1.14020871547503,3.62934270539578,0,1.69946445308487,0.906970670894253,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,0,1.58018378967908,0,0,11.5749465956288,0.36012218806262,1.29358683782755,0.643011105094777,1.06404140185364,2.49716344642899,2.63278432963394,1.522324745573,0.704015124191131,3.1774810629573,0.441056796109924,0.8244312647074,0.645857706783622,0.361877549568935,0,0.656563598980245,4.37221254944776,8.90041449650446,3.93003025835061,0.82554747185289,0.925972636848558,1.31857919903284,1.0935538217682,0,1.18984900995699,1.6794174278839,0.552799895217695,0.954670618015114,0.949007980743406,0,0.756037385752609,1.46361807210128,1.09181281873089,1.88810084938749,0.495920734352016,1.04702376793612,1.42576470620972,7.45607175704311,10.7101658349996,0.598066184175915,0.330916980914195,1.94451188344048,1.16243841129958,2.19642963138012,3.63807439801837,4.1665403150064,4.19437377702843,16.6693043369944,10.0810502190253,4.74016680942267,0.608175645870493,0.308132871494482,0.909445760844565,0.716106782669926,1.39076948346885,1.32214994471966,0.738447635872886,1.31256384932592,1.752756553065,0.806609481094724,3.31356794515158,2.40529604100824,2.92192255453922,1.13365191807606,1.10992976687032,0.269141569828427,0.839423081820392,1.9318959403219,0.563047426353546,2.01466786693992,1.2862102744744,0,25.413832917768,17.4923589872727,17.7597609166213,29.9024537278016,47.2706938641743,48.3452094329408,45.226507515531,55.3895079965791,55.7365163050572,48.1517089929193,0,3.59122386060928,0.170733605754134,2.43106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0,0.936415074698824,0.192075457214608,0.574354689556133,0.476293691283074,0.579421629724277,0.77163688185482,1.23625770240992,0.147198920134397,1.71434626192708,0.70990322463735,0.715308569841963,0.726732083161643,0,0.507687647350059,0.182927972872773,2.63069711437843,0.950628796921032,1.12228454331548,0.118635018124174,1.18205378850676,1.22769312950907,0.154936841185966,0.385813221962283,0.249810577937946,1.16965804222704,0.429742108096597,1.72159498861959,0.220591419119515,1.62307484934295 | ||
|short_description=p@chr5:145532196..145532209,+ | |short_description=p@chr5:145532196..145532209,+ | ||
}} | }} |
Latest revision as of 01:08, 4 August 2015
Short description: | p@chr5:145532196..145532209, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:145532196..145532209, + |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.21e-14 | 43 |
neuron | 7.69e-14 | 33 |
neuronal stem cell | 7.69e-14 | 33 |
neuroblast | 7.69e-14 | 33 |
electrically signaling cell | 7.69e-14 | 33 |
ectodermal cell | 1.45e-13 | 44 |
neurectodermal cell | 1.45e-13 | 44 |
CNS neuron (sensu Vertebrata) | 4.26e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.26e-13 | 23 |
electrically responsive cell | 6.19e-12 | 39 |
electrically active cell | 6.19e-12 | 39 |
somatic stem cell | 5.93e-10 | 91 |
multi fate stem cell | 5.93e-10 | 91 |
stem cell | 1.56e-08 | 97 |