FFCP PHASE1:Mm9::chr3:88011177..88011227,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=609|UniProt=|association_with_transcript=442bp_to_uc008pug.1_5end|description=CAGE_peak_1_at_uc008pug.1_5end|id=chr3:88011177..88011227,+|ontology_enrichment_celltype=CL:0000117!4.21e-19!23;CL:0000337!4.21e-19!23;CL:0000221!1.61e-15!44;CL:0000133!1.61e-15!44;CL:0002319!2.66e-15!43;CL:0000540!2.46e-12!33;CL:0000047!2.46e-12!33;CL:0000031!2.46e-12!33;CL:0000404!2.46e-12!33;CL:0000055!1.59e-11!50;CL:0000393!4.42e-09!39;CL:0000211!4.42e-09!39;CL:0002609!1.89e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,9.55e-22,23;CL:0000337,9.55e-22,23;CL:0002319,1.83e-14,43;CL:0000221,6.51e-14,44;CL:0000133,6.51e-14,44;CL:0000540,1.14e-12,33;CL:0000047,1.14e-12,33;CL:0000031,1.14e-12,33;CL:0000404,1.14e-12,33;CL:0000393,1.48e-09,39;CL:0000211,1.48e-09,39;CL:0002609,2.44e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.58e-34!75;UBERON:0001016!1.58e-34!75;UBERON:0001017!5.43e-34!73;UBERON:0005743!5.43e-34!73;UBERON:0001049!1.56e-32!52;UBERON:0005068!1.56e-32!52;UBERON:0006241!1.56e-32!52;UBERON:0007135!1.56e-32!52;UBERON:0000955!2.53e-30!50;UBERON:0006238!2.53e-30!50;UBERON:0002020!5.21e-30!34;UBERON:0002616!1.59e-29!49;UBERON:0000033!2.73e-28!63;UBERON:0002791!6.51e-26!29;UBERON:0003528!6.51e-26!29;UBERON:0001893!6.51e-26!29;UBERON:0004121!6.90e-25!102;UBERON:0000924!6.90e-25!102;UBERON:0006601!6.90e-25!102;UBERON:0003080!2.60e-24!40;UBERON:0002346!3.11e-24!71;UBERON:0003075!3.11e-24!71;UBERON:0007284!3.11e-24!71;UBERON:0002780!1.25e-23!39;UBERON:0001890!1.25e-23!39;UBERON:0006240!1.25e-23!39;UBERON:0003056!2.97e-23!49;UBERON:0000956!1.02e-19!21;UBERON:0001869!1.02e-19!21;UBERON:0000203!1.02e-19!21;UBERON:0002619!9.95e-16!17;UBERON:0007811!1.24e-15!86;UBERON:0000153!8.49e-13!94;UBERON:0002021!2.06e-10!10;UBERON:0000411!2.06e-10!10;UBERON:0001950!2.06e-10!10;UBERON:0003076!1.82e-08!12;UBERON:0003057!1.82e-08!12;UBERON:0002420!2.72e-07!8;UBERON:0007245!2.72e-07!8;UBERON:0010009!2.72e-07!8;UBERON:0010011!2.72e-07!8;UBERON:0000454!2.72e-07!8;UBERON:0001954!9.16e-07!7;UBERON:0003022!9.16e-07!7;UBERON:0002421!9.16e-07!7;UBERON:0000349!9.16e-07!7;UBERON:0002600!9.16e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-36,54;UBERON:0001017,1.58e-35,73;UBERON:0001049,3.29e-35,52;UBERON:0005068,3.29e-35,52;UBERON:0006241,3.29e-35,52;UBERON:0007135,3.29e-35,52;UBERON:0002020,2.60e-34,34;UBERON:0001016,4.58e-34,75;UBERON:0000955,2.48e-30,47;UBERON:0006238,2.48e-30,47;UBERON:0003528,1.36e-29,29;UBERON:0002791,1.36e-29,29;UBERON:0001893,1.36e-29,29;UBERON:0002616,1.93e-29,46;UBERON:0002346,5.75e-29,64;UBERON:0003075,5.75e-29,64;UBERON:0007284,5.75e-29,64;UBERON:0003080,1.01e-25,40;UBERON:0004121,1.14e-25,95;UBERON:0000924,1.14e-25,95;UBERON:0006601,1.14e-25,95;UBERON:0002780,5.98e-25,39;UBERON:0001890,5.98e-25,39;UBERON:0006240,5.98e-25,39;UBERON:0010371,2.44e-23,73;UBERON:0000956,1.86e-22,21;UBERON:0001869,1.86e-22,21;UBERON:0000203,1.86e-22,21;UBERON:0003056,5.42e-22,49;UBERON:0002619,7.33e-18,17;UBERON:0010314,3.24e-15,92;UBERON:0002021,9.58e-12,10;UBERON:0000411,9.58e-12,10;UBERON:0001950,9.58e-12,10;UBERON:0003076,1.32e-09,12;UBERON:0003057,1.32e-09,12;UBERON:0002420,3.71e-08,8;UBERON:0007245,3.71e-08,8;UBERON:0010009,3.71e-08,8;UBERON:0010011,3.71e-08,8;UBERON:0000454,3.71e-08,8;UBERON:0000025,6.00e-08,114;UBERON:0001954,1.49e-07,7;UBERON:0003022,1.49e-07,7;UBERON:0002421,1.49e-07,7;UBERON:0000349,1.49e-07,7;UBERON:0002600,1.49e-07,7|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88667922227206,3.07560655828261,1.94429899074283,1.39986421625363,2.87505128729943,0,0,0,0,0,0,10.9250888864183,12.1667925232568,9.50747105259269,0.338844532069132,0,0,0,0,5.69240209984969,7.68436610643109,38.4688461664452,36.1815914728931,29.4454945891935,14.8538511889978,11.2642955885323,22.0483438586917,31.1497780809268,28.4957823849107,7.70811166995721,6.12899222808901,5.52983519722476,9.75958529203434,7.04454855738554,11.4600941522487,7.2587579740359,10.1297269805702,8.70950012327818,10.9012576625257,9.39653093274079,13.4207600994216,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8596286177044,25.3430515244281,0,0,0,0,6.44099749440738,18.3000241127451,34.1779837746991,18.251553620189,25.5715457330331,5.40248915854856,15.8996437806402,0,0,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,2.8185018462667,1.78033276663485,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2907345477975,49.8058323915737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,11.6039569726281,0,0,0,0,0,0,0,0.566153061577665,0,0,0,9.96096080907602,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,1.26042765821917,1.16422815404479,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6368108063632,18.4130094602871,21.7700295106971,26.4653900809279,19.182310553578,14.3524840504043,20.925697507186,23.4167025676595,18.5788387683524,26.4057758993428,0.93408612825759,12.369771075432,10.4147499510022,6.32077464377565,1.46729213839588,0.735374033800057,5.55616819504038,3.91466608753899,5.45562656306086,3.79045817645696,6.08350319736575,4.33840585187975,4.30750934361459,3.3293079250532,4.93945033018274,3.81034953026459,5.44656331940821,3.8581844092741,5.35711671044299,5.00476328456951,3.77156177623957,4.43689515398344,5.00715998889374,4.65108533223451,4.32903149910521,4.23073039458383,3.65855945745545,4.99832451731901,4.34573164306758,2.80571135828869,4.86403574309114,4.23569274214923,2.45538625901814,6.35241048862461,3.08650577569826,12.9901500527732,4.21076895201735,3.22306581072447,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p1@uc008pug.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=609 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=442bp_to_uc008pug.1_5end | |||
|cluster_id=chr3:88011177..88011227,+ | |||
|description=CAGE_peak_1_at_uc008pug.1_5end | |||
|id=chr3:88011177..88011227,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.21e-19!23;CL:0000337!4.21e-19!23;CL:0000221!1.61e-15!44;CL:0000133!1.61e-15!44;CL:0002319!2.66e-15!43;CL:0000540!2.46e-12!33;CL:0000047!2.46e-12!33;CL:0000031!2.46e-12!33;CL:0000404!2.46e-12!33;CL:0000055!1.59e-11!50;CL:0000393!4.42e-09!39;CL:0000211!4.42e-09!39;CL:0002609!1.89e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.55e-22,23;CL:0000337,9.55e-22,23;CL:0002319,1.83e-14,43;CL:0000221,6.51e-14,44;CL:0000133,6.51e-14,44;CL:0000540,1.14e-12,33;CL:0000047,1.14e-12,33;CL:0000031,1.14e-12,33;CL:0000404,1.14e-12,33;CL:0000393,1.48e-09,39;CL:0000211,1.48e-09,39;CL:0002609,2.44e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.58e-34!75;UBERON:0001016!1.58e-34!75;UBERON:0001017!5.43e-34!73;UBERON:0005743!5.43e-34!73;UBERON:0001049!1.56e-32!52;UBERON:0005068!1.56e-32!52;UBERON:0006241!1.56e-32!52;UBERON:0007135!1.56e-32!52;UBERON:0000955!2.53e-30!50;UBERON:0006238!2.53e-30!50;UBERON:0002020!5.21e-30!34;UBERON:0002616!1.59e-29!49;UBERON:0000033!2.73e-28!63;UBERON:0002791!6.51e-26!29;UBERON:0003528!6.51e-26!29;UBERON:0001893!6.51e-26!29;UBERON:0004121!6.90e-25!102;UBERON:0000924!6.90e-25!102;UBERON:0006601!6.90e-25!102;UBERON:0003080!2.60e-24!40;UBERON:0002346!3.11e-24!71;UBERON:0003075!3.11e-24!71;UBERON:0007284!3.11e-24!71;UBERON:0002780!1.25e-23!39;UBERON:0001890!1.25e-23!39;UBERON:0006240!1.25e-23!39;UBERON:0003056!2.97e-23!49;UBERON:0000956!1.02e-19!21;UBERON:0001869!1.02e-19!21;UBERON:0000203!1.02e-19!21;UBERON:0002619!9.95e-16!17;UBERON:0007811!1.24e-15!86;UBERON:0000153!8.49e-13!94;UBERON:0002021!2.06e-10!10;UBERON:0000411!2.06e-10!10;UBERON:0001950!2.06e-10!10;UBERON:0003076!1.82e-08!12;UBERON:0003057!1.82e-08!12;UBERON:0002420!2.72e-07!8;UBERON:0007245!2.72e-07!8;UBERON:0010009!2.72e-07!8;UBERON:0010011!2.72e-07!8;UBERON:0000454!2.72e-07!8;UBERON:0001954!9.16e-07!7;UBERON:0003022!9.16e-07!7;UBERON:0002421!9.16e-07!7;UBERON:0000349!9.16e-07!7;UBERON:0002600!9.16e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-36,54;UBERON:0001017,1.58e-35,73;UBERON:0001049,3.29e-35,52;UBERON:0005068,3.29e-35,52;UBERON:0006241,3.29e-35,52;UBERON:0007135,3.29e-35,52;UBERON:0002020,2.60e-34,34;UBERON:0001016,4.58e-34,75;UBERON:0000955,2.48e-30,47;UBERON:0006238,2.48e-30,47;UBERON:0003528,1.36e-29,29;UBERON:0002791,1.36e-29,29;UBERON:0001893,1.36e-29,29;UBERON:0002616,1.93e-29,46;UBERON:0002346,5.75e-29,64;UBERON:0003075,5.75e-29,64;UBERON:0007284,5.75e-29,64;UBERON:0003080,1.01e-25,40;UBERON:0004121,1.14e-25,95;UBERON:0000924,1.14e-25,95;UBERON:0006601,1.14e-25,95;UBERON:0002780,5.98e-25,39;UBERON:0001890,5.98e-25,39;UBERON:0006240,5.98e-25,39;UBERON:0010371,2.44e-23,73;UBERON:0000956,1.86e-22,21;UBERON:0001869,1.86e-22,21;UBERON:0000203,1.86e-22,21;UBERON:0003056,5.42e-22,49;UBERON:0002619,7.33e-18,17;UBERON:0010314,3.24e-15,92;UBERON:0002021,9.58e-12,10;UBERON:0000411,9.58e-12,10;UBERON:0001950,9.58e-12,10;UBERON:0003076,1.32e-09,12;UBERON:0003057,1.32e-09,12;UBERON:0002420,3.71e-08,8;UBERON:0007245,3.71e-08,8;UBERON:0010009,3.71e-08,8;UBERON:0010011,3.71e-08,8;UBERON:0000454,3.71e-08,8;UBERON:0000025,6.00e-08,114;UBERON:0001954,1.49e-07,7;UBERON:0003022,1.49e-07,7;UBERON:0002421,1.49e-07,7;UBERON:0000349,1.49e-07,7;UBERON:0002600,1.49e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88667922227206,3.07560655828261,1.94429899074283,1.39986421625363,2.87505128729943,0,0,0,0,0,0,10.9250888864183,12.1667925232568,9.50747105259269,0.338844532069132,0,0,0,0,5.69240209984969,7.68436610643109,38.4688461664452,36.1815914728931,29.4454945891935,14.8538511889978,11.2642955885323,22.0483438586917,31.1497780809268,28.4957823849107,7.70811166995721,6.12899222808901,5.52983519722476,9.75958529203434,7.04454855738554,11.4600941522487,7.2587579740359,10.1297269805702,8.70950012327818,10.9012576625257,9.39653093274079,13.4207600994216,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8596286177044,25.3430515244281,0,0,0,0,6.44099749440738,18.3000241127451,34.1779837746991,18.251553620189,25.5715457330331,5.40248915854856,15.8996437806402,0,0,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,2.8185018462667,1.78033276663485,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2907345477975,49.8058323915737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,11.6039569726281,0,0,0,0,0,0,0,0.566153061577665,0,0,0,9.96096080907602,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,1.26042765821917,1.16422815404479,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6368108063632,18.4130094602871,21.7700295106971,26.4653900809279,19.182310553578,14.3524840504043,20.925697507186,23.4167025676595,18.5788387683524,26.4057758993428,0.93408612825759,12.369771075432,10.4147499510022,6.32077464377565,1.46729213839588,0.735374033800057,5.55616819504038,3.91466608753899,5.45562656306086,3.79045817645696,6.08350319736575,4.33840585187975,4.30750934361459,3.3293079250532,4.93945033018274,3.81034953026459,5.44656331940821,3.8581844092741,5.35711671044299,5.00476328456951,3.77156177623957,4.43689515398344,5.00715998889374,4.65108533223451,4.32903149910521,4.23073039458383,3.65855945745545,4.99832451731901,4.34573164306758,2.80571135828869,4.86403574309114,4.23569274214923,2.45538625901814,6.35241048862461,3.08650577569826,12.9901500527732,4.21076895201735,3.22306581072447,0.57386499620653,0.220591419119515,0.463735671240843 | |||
|short_description=p1@uc008pug.1 | |||
}} |
Latest revision as of 03:42, 4 August 2015
Short description: | p1@uc008pug.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc008pug.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:609 |
Association with transcript: | 442bp_to_uc008pug.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.55e-22 | 23 |
neuroblast (sensu Vertebrata) | 9.55e-22 | 23 |
neural cell | 1.83e-14 | 43 |
ectodermal cell | 6.51e-14 | 44 |
neurectodermal cell | 6.51e-14 | 44 |
neuron | 1.14e-12 | 33 |
neuronal stem cell | 1.14e-12 | 33 |
neuroblast | 1.14e-12 | 33 |
electrically signaling cell | 1.14e-12 | 33 |
electrically responsive cell | 1.48e-09 | 39 |
electrically active cell | 1.48e-09 | 39 |
neuron of cerebral cortex | 2.44e-08 | 6 |