FFCP PHASE1:Mm9::chr8:8533654..8533663,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:8533654..8533663,+ to FFCP PHASE1:Mm9::chr8:8533654..8533663,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=397 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:8533654..8533663,+ | |||
|description=CAGE_peak_at_chr8:8533654..8533663,+ | |||
|id=chr8:8533654..8533663,+ | |||
|ontology_enrichment_celltype=CL:0000473!5.70e-27!3;CL:0000627!5.70e-27!3;CL:0000682!5.70e-27!3;CL:0000239!3.19e-23!6;CL:0000677!3.19e-23!6;CL:0000212!3.19e-23!6;CL:0000584!3.19e-23!6;CL:0000075!5.63e-20!7;CL:0000066!9.10e-17!25;CL:0002563!1.23e-15!9;CL:0002251!1.23e-15!9;CL:0002076!1.57e-09!15;CL:0000223!3.19e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.64e-33,3;CL:0000473,1.23e-14,7;CL:0000066,4.55e-11,25;CL:0000239,3.71e-08,6;CL:0000677,3.71e-08,6;CL:0000584,3.71e-08,6;CL:0000075,4.05e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.34e-28!15;UBERON:0001962!4.66e-19!2;UBERON:0001961!4.66e-19!2;UBERON:0001744!4.66e-19!2;UBERON:0004923!1.12e-17!24;UBERON:0001242!8.52e-17!13;UBERON:0000060!8.52e-17!13;UBERON:0001262!8.52e-17!13;UBERON:0004786!8.52e-17!13;UBERON:0003350!1.23e-15!9;UBERON:0004808!1.23e-15!9;UBERON:0001277!1.23e-15!9;UBERON:0002465!4.82e-13!3;UBERON:0000485!7.21e-13!11;UBERON:0003199!3.04e-10!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.06e-23,2;UBERON:0001961,3.06e-23,2;UBERON:0001744,3.06e-23,2;UBERON:0000344,1.49e-18,15;UBERON:0002465,7.42e-16,3;UBERON:0003199,2.59e-12,1;UBERON:0004923,1.06e-11,24;UBERON:0001242,3.26e-08,13;UBERON:0001262,3.26e-08,13;UBERON:0004786,3.26e-08,13 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,0,0,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,1.60586496747019,1.14846392823004,1.29228598847722,2.58565479223067,0,0,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,0.454999239389536,0,0,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,1.60586496747019,1.14846392823004,1.29228598847722,2.58565479223067,0,0,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:8533654..8533663,+ | |||
}} | }} |
Latest revision as of 04:29, 4 August 2015
Short description: | p@chr8:8533654..8533663, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:8533654..8533663, + |
Coexpression cluster: | MCL_coexpression_mm9:397 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.64e-33 | 3 |
defensive cell | 1.23e-14 | 7 |
epithelial cell | 4.55e-11 | 25 |
brush border epithelial cell | 3.71e-08 | 6 |
gut absorptive cell | 3.71e-08 | 6 |
enterocyte | 3.71e-08 | 6 |
columnar/cuboidal epithelial cell | 4.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 3.06e-23 | 2 |
mucosa-associated lymphoid tissue | 3.06e-23 | 2 |
lymphoid tissue | 3.06e-23 | 2 |
mucosa | 1.49e-18 | 15 |
lymphoid system | 7.42e-16 | 3 |
egg chamber | 2.59e-12 | 1 |
organ component layer | 1.06e-11 | 24 |
intestinal mucosa | 3.26e-08 | 13 |
wall of intestine | 3.26e-08 | 13 |
gastrointestinal system mucosa | 3.26e-08 | 13 |