FFCP PHASE1:Mm9::chr8:87297878..87297935,-: Difference between revisions
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{{FFCP|EntrezGene=18032|HGNC=|MCL_coexpression_id=3161|UniProt=F6VBN9,Q3TYK3,E9PUH7,Q5CZY4|association_with_transcript=332bp_to_ENSMUST00000063596,ENSMUST00000109762,NM_001081981,uc009mnc.1,uc009mnd.1_5end|description=CAGE_peak_3_at_Nfix_5end|id=chr8:87297878..87297935,-|ontology_enrichment_celltype=CL:0000055!1.96e-14!50;CL:0002319!8.00e-14!43;CL:0000221!3.20e-13!44;CL:0000133!3.20e-13!44;CL:0000393!9.73e-13!39;CL:0000211!9.73e-13!39;CL:0000540!2.72e-11!33;CL:0000047!2.72e-11!33;CL:0000031!2.72e-11!33;CL:0000404!2.72e-11!33;CL:0000117!6.65e-10!23;CL:0000337!6.65e-10!23;CL:0002321!5.41e-07!70;CL:0000220!5.41e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,2.56e-15,43;CL:0000221,1.58e-14,44;CL:0000133,1.58e-14,44;CL:0000393,6.31e-14,39;CL:0000211,6.31e-14,39;CL:0000540,2.52e-12,33;CL:0000047,2.52e-12,33;CL:0000031,2.52e-12,33;CL:0000404,2.52e-12,33;CL:0000117,8.62e-11,23;CL:0000337,8.62e-11,23;CL:0002321,4.94e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.64e-31!73;UBERON:0005743!7.64e-31!73;UBERON:0000073!6.80e-29!75;UBERON:0001016!6.80e-29!75;UBERON:0004121!1.26e-24!102;UBERON:0000924!1.26e-24!102;UBERON:0006601!1.26e-24!102;UBERON:0001049!1.04e-23!52;UBERON:0005068!1.04e-23!52;UBERON:0006241!1.04e-23!52;UBERON:0007135!1.04e-23!52;UBERON:0000955!7.33e-23!50;UBERON:0006238!7.33e-23!50;UBERON:0002616!2.76e-22!49;UBERON:0000033!1.11e-21!63;UBERON:0002346!2.24e-20!71;UBERON:0003075!2.24e-20!71;UBERON:0007284!2.24e-20!71;UBERON:0002020!7.37e-19!34;UBERON:0003080!3.26e-17!40;UBERON:0002791!5.68e-17!29;UBERON:0003528!5.68e-17!29;UBERON:0001893!5.68e-17!29;UBERON:0003056!7.21e-17!49;UBERON:0002780!1.20e-16!39;UBERON:0001890!1.20e-16!39;UBERON:0006240!1.20e-16!39;UBERON:0000956!4.80e-14!21;UBERON:0001869!4.80e-14!21;UBERON:0000203!4.80e-14!21;UBERON:0002619!2.67e-11!17;UBERON:0000153!5.41e-10!94;UBERON:0007811!1.25e-09!86;UBERON:0004111!5.89e-08!122;UBERON:0000025!1.23e-07!114;UBERON:0002021!1.39e-07!10;UBERON:0000411!1.39e-07!10;UBERON:0001950!1.39e-07!10;UBERON:0003076!3.88e-07!12;UBERON:0003057!3.88e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.73e-33,73;UBERON:0001016,1.42e-31,75;UBERON:0004121,2.99e-30,95;UBERON:0000924,2.99e-30,95;UBERON:0006601,2.99e-30,95;UBERON:0000073,2.17e-26,54;UBERON:0002346,2.57e-26,64;UBERON:0003075,2.57e-26,64;UBERON:0007284,2.57e-26,64;UBERON:0001049,1.37e-25,52;UBERON:0005068,1.37e-25,52;UBERON:0006241,1.37e-25,52;UBERON:0007135,1.37e-25,52;UBERON:0010371,2.93e-25,73;UBERON:0000955,4.59e-23,47;UBERON:0006238,4.59e-23,47;UBERON:0002616,1.94e-22,46;UBERON:0002020,1.06e-20,34;UBERON:0003528,1.30e-18,29;UBERON:0002791,1.30e-18,29;UBERON:0001893,1.30e-18,29;UBERON:0003080,2.00e-18,40;UBERON:0003056,2.34e-18,49;UBERON:0002780,8.36e-18,39;UBERON:0001890,8.36e-18,39;UBERON:0006240,8.36e-18,39;UBERON:0000956,2.26e-15,21;UBERON:0001869,2.26e-15,21;UBERON:0000203,2.26e-15,21;UBERON:0010314,1.94e-14,92;UBERON:0002619,2.46e-12,17;UBERON:0002021,3.16e-08,10;UBERON:0000411,3.16e-08,10;UBERON:0001950,3.16e-08,10;UBERON:0003076,9.84e-08,12;UBERON:0003057,9.84e-08,12;UBERON:0004111,9.45e-07,122|phase1_expression=3.20297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0.816677425049476,0,0,0,0,0,0,6.16894408080329,6.18399280439039,7.89251034295231,7.04152209913235,12.6454590700659,18.8930117151646,18.4708404120569,11.8988458381558,30.188038516644,0,0,0,2.57259436035947,4.58453503902011,2.06268836910977,3.84401275633236,5.81890077199236,1.90149421051854,1.69422266034566,3.55717918444456,0.449949858640699,0.988866362566974,0,9.58720353658895,19.5951335713993,25.403955015577,35.1015439662396,35.3345935070322,6.85562362569129,3.97563373712904,6.36952155917761,7.57179221044067,15.6267193723704,6.60695285996332,7.15049093277051,10.1380311949121,3.69281605644543,4.66586982372289,4.68822033501084,11.725685958058,5.06486349028512,12.9878510610289,6.48182888042069,7.26095572075425,8.38797506213853,0.227178579999552,0,0.289864488701678,0,0.679971333707751,0,0,0,0.842666520790511,3.06774580640504,2.33807404142582,2.12003744706204,0.281686839553361,5.13305909657271,0,7.11066703153331,1.08245520505607,0.760079596425296,1.01104889002957,0.79928715803342,0,0,0.693941307064543,1.21786191324856,0.922461989024234,0.452167921657868,0.470354828542819,0.251333182659351,0,0.722996784599558,1.76922110389975,5.66183974815932,2.42925670306433,2.42437626567611,1.86391761218122,32.2058876712702,25.5524982312415,0.510914110417183,0.11981512450592,0,0.127070227073065,13.6309481858389,16.4700217014706,9.80103946480342,26.9427696298029,23.7815375317207,16.2074674756457,11.5191296778108,3.86989582631202,0.995255764880744,0,4.41927897361595,0.130120442962704,0,1.0803727788321,2.26057226753573,6.53150391852747,9.60852902136373,8.24575176125614,3.88055056108524,0,0.945530400839096,2.46331573829528,5.04150184583422,7.22922847986555,8.00979983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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18032 | |||
|HGNC= | |||
|MCL_coexpression_id=3161 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6VBN9,uniprot:Q3TYK3,uniprot:E9PUH7,uniprot:Q5CZY4 | |||
|association_with_transcript=332bp_to_ENSMUST00000063596,ENSMUST00000109762,NM_001081981,uc009mnc.1,uc009mnd.1_5end | |||
|cluster_id=chr8:87297878..87297935,- | |||
|description=CAGE_peak_3_at_Nfix_5end | |||
|id=chr8:87297878..87297935,- | |||
|ontology_enrichment_celltype=CL:0000055!1.96e-14!50;CL:0002319!8.00e-14!43;CL:0000221!3.20e-13!44;CL:0000133!3.20e-13!44;CL:0000393!9.73e-13!39;CL:0000211!9.73e-13!39;CL:0000540!2.72e-11!33;CL:0000047!2.72e-11!33;CL:0000031!2.72e-11!33;CL:0000404!2.72e-11!33;CL:0000117!6.65e-10!23;CL:0000337!6.65e-10!23;CL:0002321!5.41e-07!70;CL:0000220!5.41e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.56e-15,43;CL:0000221,1.58e-14,44;CL:0000133,1.58e-14,44;CL:0000393,6.31e-14,39;CL:0000211,6.31e-14,39;CL:0000540,2.52e-12,33;CL:0000047,2.52e-12,33;CL:0000031,2.52e-12,33;CL:0000404,2.52e-12,33;CL:0000117,8.62e-11,23;CL:0000337,8.62e-11,23;CL:0002321,4.94e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.64e-31!73;UBERON:0005743!7.64e-31!73;UBERON:0000073!6.80e-29!75;UBERON:0001016!6.80e-29!75;UBERON:0004121!1.26e-24!102;UBERON:0000924!1.26e-24!102;UBERON:0006601!1.26e-24!102;UBERON:0001049!1.04e-23!52;UBERON:0005068!1.04e-23!52;UBERON:0006241!1.04e-23!52;UBERON:0007135!1.04e-23!52;UBERON:0000955!7.33e-23!50;UBERON:0006238!7.33e-23!50;UBERON:0002616!2.76e-22!49;UBERON:0000033!1.11e-21!63;UBERON:0002346!2.24e-20!71;UBERON:0003075!2.24e-20!71;UBERON:0007284!2.24e-20!71;UBERON:0002020!7.37e-19!34;UBERON:0003080!3.26e-17!40;UBERON:0002791!5.68e-17!29;UBERON:0003528!5.68e-17!29;UBERON:0001893!5.68e-17!29;UBERON:0003056!7.21e-17!49;UBERON:0002780!1.20e-16!39;UBERON:0001890!1.20e-16!39;UBERON:0006240!1.20e-16!39;UBERON:0000956!4.80e-14!21;UBERON:0001869!4.80e-14!21;UBERON:0000203!4.80e-14!21;UBERON:0002619!2.67e-11!17;UBERON:0000153!5.41e-10!94;UBERON:0007811!1.25e-09!86;UBERON:0004111!5.89e-08!122;UBERON:0000025!1.23e-07!114;UBERON:0002021!1.39e-07!10;UBERON:0000411!1.39e-07!10;UBERON:0001950!1.39e-07!10;UBERON:0003076!3.88e-07!12;UBERON:0003057!3.88e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.73e-33,73;UBERON:0001016,1.42e-31,75;UBERON:0004121,2.99e-30,95;UBERON:0000924,2.99e-30,95;UBERON:0006601,2.99e-30,95;UBERON:0000073,2.17e-26,54;UBERON:0002346,2.57e-26,64;UBERON:0003075,2.57e-26,64;UBERON:0007284,2.57e-26,64;UBERON:0001049,1.37e-25,52;UBERON:0005068,1.37e-25,52;UBERON:0006241,1.37e-25,52;UBERON:0007135,1.37e-25,52;UBERON:0010371,2.93e-25,73;UBERON:0000955,4.59e-23,47;UBERON:0006238,4.59e-23,47;UBERON:0002616,1.94e-22,46;UBERON:0002020,1.06e-20,34;UBERON:0003528,1.30e-18,29;UBERON:0002791,1.30e-18,29;UBERON:0001893,1.30e-18,29;UBERON:0003080,2.00e-18,40;UBERON:0003056,2.34e-18,49;UBERON:0002780,8.36e-18,39;UBERON:0001890,8.36e-18,39;UBERON:0006240,8.36e-18,39;UBERON:0000956,2.26e-15,21;UBERON:0001869,2.26e-15,21;UBERON:0000203,2.26e-15,21;UBERON:0010314,1.94e-14,92;UBERON:0002619,2.46e-12,17;UBERON:0002021,3.16e-08,10;UBERON:0000411,3.16e-08,10;UBERON:0001950,3.16e-08,10;UBERON:0003076,9.84e-08,12;UBERON:0003057,9.84e-08,12;UBERON:0004111,9.45e-07,122 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0.816677425049476,0,0,0,0,0,0,6.16894408080329,6.18399280439039,7.89251034295231,7.04152209913235,12.6454590700659,18.8930117151646,18.4708404120569,11.8988458381558,30.188038516644,0,0,0,2.57259436035947,4.58453503902011,2.06268836910977,3.84401275633236,5.81890077199236,1.90149421051854,1.69422266034566,3.55717918444456,0.449949858640699,0.988866362566974,0,9.58720353658895,19.5951335713993,25.403955015577,35.1015439662396,35.3345935070322,6.85562362569129,3.97563373712904,6.36952155917761,7.57179221044067,15.6267193723704,6.60695285996332,7.15049093277051,10.1380311949121,3.69281605644543,4.66586982372289,4.68822033501084,11.725685958058,5.06486349028512,12.9878510610289,6.48182888042069,7.26095572075425,8.38797506213853,0.227178579999552,0,0.289864488701678,0,0.679971333707751,0,0,0,0.842666520790511,3.06774580640504,2.33807404142582,2.12003744706204,0.281686839553361,5.13305909657271,0,7.11066703153331,1.08245520505607,0.760079596425296,1.01104889002957,0.79928715803342,0,0,0.693941307064543,1.21786191324856,0.922461989024234,0.452167921657868,0.470354828542819,0.251333182659351,0,0.722996784599558,1.76922110389975,5.66183974815932,2.42925670306433,2.42437626567611,1.86391761218122,32.2058876712702,25.5524982312415,0.510914110417183,0.11981512450592,0,0.127070227073065,13.6309481858389,16.4700217014706,9.80103946480342,26.9427696298029,23.7815375317207,16.2074674756457,11.5191296778108,3.86989582631202,0.995255764880744,0,4.41927897361595,0.130120442962704,0,1.0803727788321,2.26057226753573,6.53150391852747,9.60852902136373,8.24575176125614,3.88055056108524,0,0.945530400839096,2.46331573829528,5.04150184583422,7.22922847986555,8.00979983000983,8.23128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0.900310307305074,1.18372367792605,0.787056926989615,0.308534225774757,0.232533944750408,0.804820204198858,0.700592054203017,0.822799249567402,1.47750717671186,1.21603214318784,0.584799949701329,1.09775057645525,0.536825675041487,26.0759536219518,50.6290692906079,0,0.264450566663544,0.213288250535234,0.232236671860439,0.902072229254653,0,0.444756087689741,0.570676878337677,0.474529061544512,0.988193728344065,1.25667604400135,1.79060824837036,0.779856348476481,0,0.648414149624083,0.597423819763102,1.51734320762465,0.799739588268102,1.1270773567308,0.814605311381257,0.775809948670503,1.05203729835478,0.126473074248515,0.738050739898011,0.156998727841375,0.246794327843601,0,0.333690211432188,0.589676985339609,0.449724224769707,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.505157755894224,0.896987067609561,0.964887042726734,1.84753190166605,0.189491411770485,1.14075483509418,1.01847051465113,0.704070744865506,1.17254380209271,1.90434912708811,0.585400943573396,1.41871629695572,2.43611158613652,1.75400245523236,0.655453258862952,1.72684981865896,1.59113964439663,0,0,2.95058563811422,0.827810238914197,25.2064426280833,16.4096361229084,9.83609672260053,3.7870639080656,3.78609863299508,2.73307121007647,5.81643173878557,2.15071918157297,3.34198011123591,1.13230612315533,6.07216052512342,4.9683495844923,5.92931666919785,12.8528526568723,1.84522110770749,5.69809931735217,4.39794790254655,4.28922319728592,0,0.242780636154981,0.906970670894253,1.50884063804718,1.47650946440386,1.22974059177571,1.55056975900933,1.81766864738753,1.78248689192361,2.21225730555071,0,1.03135543248187,12.9367050186439,0.18006109403131,0.388076051348264,0.428674070063185,2.12808280370728,4.45922044005176,4.27827453565514,3.95804433848979,0.23467170806371,0,3.08739757276947,1.15420377059036,3.87514624070173,2.95533332147964,2.50681922406587,2.9545361954111,1.1659233465194,29.2971977176605,0,1.03193433981611,0.555583582109135,0.188368457004691,0,0,0.509935289981566,0.419854356970974,0,0,0.316335993581135,0.406638934253697,0.972048067396211,1.67270636811575,2.18362563746178,2.02296519577231,1.48776220305605,0.785267825952089,0.777689839750757,1.24267862617385,0,0.299033092087958,0.496375471371293,3.11121901350476,2.84151611651008,3.8859908862879,3.75543163666413,3.1249052362548,1.78260885523708,0.966336483304024,0.576060012515731,0,0.608175645870493,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0.201932899896295,0.304827226619999,0.100826185136841,0,0.192423683280659,0,2.0405734525369,0,0.0897138566094757,0,1.15913756419314,1.12609485270709,1.64836461840539,3.00115730710692,2.00628841614145,28.2375921308533,20.2543104063158,26.9260891316516,24.4031518928036,23.9778881919725,23.4172108190807,20.925697507186,23.4167025676595,23.1102628581944,27.9590568345983,0.207574695168353,0,2.90247129782028,5.34834777550247,3.14419743941973,3.30918315210025,4.22268782823069,3.29656091582231,2.24643446714271,3.53776096469316,2.02783439912192,3.77252682772152,3.55837728385553,3.71345883948242,3.38869266838118,2.85776214769844,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| |||
|short_description=p3@Nfix | |||
}} |
Revision as of 06:09, 4 August 2015
Short description: | p3@Nfix |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nfix_5end |
Coexpression cluster: | MCL_coexpression_mm9:3161 |
Association with transcript: | 332bp_to_ENSMUST00000063596, ENSMUST00000109762, NM_001081981, uc009mnc.1, uc009mnd.1_5end |
EntrezGene: | 18032 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.56e-15 | 43 |
ectodermal cell | 1.58e-14 | 44 |
neurectodermal cell | 1.58e-14 | 44 |
electrically responsive cell | 6.31e-14 | 39 |
electrically active cell | 6.31e-14 | 39 |
neuron | 2.52e-12 | 33 |
neuronal stem cell | 2.52e-12 | 33 |
neuroblast | 2.52e-12 | 33 |
electrically signaling cell | 2.52e-12 | 33 |
CNS neuron (sensu Vertebrata) | 8.62e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.62e-11 | 23 |
embryonic cell | 4.94e-08 | 70 |