FFCP PHASE1:Mm9::chr2:151906701..151906711,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:151906701..151906711,+ | |||
|description=CAGE_peak_at_chr2:151906701..151906711,+ | |description=CAGE_peak_at_chr2:151906701..151906711,+ | ||
|id=chr2:151906701..151906711,+ | |id=chr2:151906701..151906711,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.52e-18!23;CL:0000337!1.52e-18!23;CL:0002609!1.36e-12!6;CL:0000540!1.51e-11!33;CL:0000047!1.51e-11!33;CL:0000031!1.51e-11!33;CL:0000404!1.51e-11!33;CL:0002319!6.56e-10!43;CL:0000221!1.41e-09!44;CL:0000133!1.41e-09!44;CL:0000393!4.18e-09!39;CL:0000211!4.18e-09!39;CL:0000055!7.22e-08!50;CL:0002608!4.77e-07!3 | |ontology_enrichment_celltype=CL:0000117!1.52e-18!23;CL:0000337!1.52e-18!23;CL:0002609!1.36e-12!6;CL:0000540!1.51e-11!33;CL:0000047!1.51e-11!33;CL:0000031!1.51e-11!33;CL:0000404!1.51e-11!33;CL:0002319!6.56e-10!43;CL:0000221!1.41e-09!44;CL:0000133!1.41e-09!44;CL:0000393!4.18e-09!39;CL:0000211!4.18e-09!39;CL:0000055!7.22e-08!50;CL:0002608!4.77e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,8.37e-49,6;CL:0000117,3.34e-34,23;CL:0000337,3.34e-34,23;CL:0002608,5.39e-25,3;CL:0000540,1.09e-23,33;CL:0000047,1.09e-23,33;CL:0000031,1.09e-23,33;CL:0000404,1.09e-23,33;CL:0000393,5.87e-20,39;CL:0000211,5.87e-20,39;CL:0002319,4.79e-18,43;CL:0000221,1.27e-17,44;CL:0000133,1.27e-17,44;CL:0000120,1.97e-11,3;CL:0002321,8.00e-11,70;CL:0000723,3.83e-08,91;CL:0000048,3.83e-08,91;CL:0000034,1.38e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.03e-14!49;UBERON:0002020!2.05e-12!34;UBERON:0002346!3.08e-12!71;UBERON:0003075!3.08e-12!71;UBERON:0007284!3.08e-12!71;UBERON:0000033!3.37e-12!63;UBERON:0001049!9.21e-12!52;UBERON:0005068!9.21e-12!52;UBERON:0006241!9.21e-12!52;UBERON:0007135!9.21e-12!52;UBERON:0002791!1.03e-11!29;UBERON:0003528!1.03e-11!29;UBERON:0001893!1.03e-11!29;UBERON:0003080!4.91e-11!40;UBERON:0000073!6.21e-11!75;UBERON:0001016!6.21e-11!75;UBERON:0004121!2.14e-10!102;UBERON:0000924!2.14e-10!102;UBERON:0006601!2.14e-10!102;UBERON:0002616!2.82e-10!49;UBERON:0002780!4.59e-10!39;UBERON:0001890!4.59e-10!39;UBERON:0006240!4.59e-10!39;UBERON:0000955!5.76e-10!50;UBERON:0006238!5.76e-10!50;UBERON:0001017!1.28e-09!73;UBERON:0005743!1.28e-09!73;UBERON:0002420!3.87e-08!8;UBERON:0007245!3.87e-08!8;UBERON:0010009!3.87e-08!8;UBERON:0010011!3.87e-08!8;UBERON:0000454!3.87e-08!8;UBERON:0007811!6.54e-08!86;UBERON:0001954!9.15e-07!7;UBERON:0003022!9.15e-07!7;UBERON:0002421!9.15e-07!7;UBERON:0000349!9.15e-07!7;UBERON:0002600!9.15e-07!7 | |ontology_enrichment_uberon=UBERON:0003056!1.03e-14!49;UBERON:0002020!2.05e-12!34;UBERON:0002346!3.08e-12!71;UBERON:0003075!3.08e-12!71;UBERON:0007284!3.08e-12!71;UBERON:0000033!3.37e-12!63;UBERON:0001049!9.21e-12!52;UBERON:0005068!9.21e-12!52;UBERON:0006241!9.21e-12!52;UBERON:0007135!9.21e-12!52;UBERON:0002791!1.03e-11!29;UBERON:0003528!1.03e-11!29;UBERON:0001893!1.03e-11!29;UBERON:0003080!4.91e-11!40;UBERON:0000073!6.21e-11!75;UBERON:0001016!6.21e-11!75;UBERON:0004121!2.14e-10!102;UBERON:0000924!2.14e-10!102;UBERON:0006601!2.14e-10!102;UBERON:0002616!2.82e-10!49;UBERON:0002780!4.59e-10!39;UBERON:0001890!4.59e-10!39;UBERON:0006240!4.59e-10!39;UBERON:0000955!5.76e-10!50;UBERON:0006238!5.76e-10!50;UBERON:0001017!1.28e-09!73;UBERON:0005743!1.28e-09!73;UBERON:0002420!3.87e-08!8;UBERON:0007245!3.87e-08!8;UBERON:0010009!3.87e-08!8;UBERON:0010011!3.87e-08!8;UBERON:0000454!3.87e-08!8;UBERON:0007811!6.54e-08!86;UBERON:0001954!9.15e-07!7;UBERON:0003022!9.15e-07!7;UBERON:0002421!9.15e-07!7;UBERON:0000349!9.15e-07!7;UBERON:0002600!9.15e-07!7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.36e-15,34;UBERON:0000956,6.44e-14,21;UBERON:0001869,6.44e-14,21;UBERON:0000203,6.44e-14,21;UBERON:0003528,1.92e-13,29;UBERON:0002791,1.92e-13,29;UBERON:0001893,1.92e-13,29;UBERON:0001954,4.25e-11,7;UBERON:0003022,4.25e-11,7;UBERON:0002421,4.25e-11,7;UBERON:0000349,4.25e-11,7;UBERON:0002600,4.25e-11,7;UBERON:0001017,2.39e-10,73;UBERON:0003056,4.56e-10,49;UBERON:0001016,4.73e-10,75;UBERON:0002780,6.70e-10,39;UBERON:0001890,6.70e-10,39;UBERON:0006240,6.70e-10,39;UBERON:0003080,1.21e-09,40;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0001049,1.82e-09,52;UBERON:0005068,1.82e-09,52;UBERON:0006241,1.82e-09,52;UBERON:0007135,1.82e-09,52;UBERON:0000073,4.29e-09,54;UBERON:0002616,2.50e-08,46;UBERON:0010371,2.67e-08,73;UBERON:0000955,3.84e-08,47;UBERON:0006238,3.84e-08,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0,1.90149421051854,0,0,0,0,0,0,0,2.69592992002042,3.78016627328734,3.57552434297349,0,0.220868540951614,2.08234358665422,2.68367318851062,3.67687514644008,0,0.255374676170375,0,1.58263545276233,0.731901148819277,0.52091337055676,0.279182999001381,0.56276261003168,0,0,0,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0.299581278809645,0,0.502617408451458,0,0,0,0.324482526135515,0,0,0,0,0,0.229902104433473,0,0.30140963567143,0.476255494059295,1.0249097622788,0.937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.518936737920883,0,0.682934423016537,0.486213434136588,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.192075457214608,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0.263069711437843,0,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0,1.90149421051854,0,0,0,0,0,0,0,2.69592992002042,3.78016627328734,3.57552434297349,0,0.220868540951614,2.08234358665422,2.68367318851062,3.67687514644008,0,0.255374676170375,0,1.58263545276233,0.731901148819277,0.52091337055676,0.279182999001381,0.56276261003168,0,0,0,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0.299581278809645,0,0.502617408451458,0,0,0,0.324482526135515,0,0,0,0,0,0.229902104433473,0,0.30140963567143,0.476255494059295,1.0249097622788,0.937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.518936737920883,0,0.682934423016537,0.486213434136588,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.192075457214608,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0.263069711437843,0,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr2:151906701..151906711,+ | |short_description=p@chr2:151906701..151906711,+ | ||
}} | }} |
Latest revision as of 06:23, 4 August 2015
Short description: | p@chr2:151906701..151906711, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:151906701..151906711, + |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 8.37e-49 | 6 |
CNS neuron (sensu Vertebrata) | 3.34e-34 | 23 |
neuroblast (sensu Vertebrata) | 3.34e-34 | 23 |
hippocampal neuron | 5.39e-25 | 3 |
neuron | 1.09e-23 | 33 |
neuronal stem cell | 1.09e-23 | 33 |
neuroblast | 1.09e-23 | 33 |
electrically signaling cell | 1.09e-23 | 33 |
electrically responsive cell | 5.87e-20 | 39 |
electrically active cell | 5.87e-20 | 39 |
neural cell | 4.79e-18 | 43 |
ectodermal cell | 1.27e-17 | 44 |
neurectodermal cell | 1.27e-17 | 44 |
granule cell | 1.97e-11 | 3 |
embryonic cell | 8.00e-11 | 70 |
somatic stem cell | 3.83e-08 | 91 |
multi fate stem cell | 3.83e-08 | 91 |
stem cell | 1.38e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
gray matter | 9.36e-15 | 34 |
cerebral cortex | 6.44e-14 | 21 |
cerebral hemisphere | 6.44e-14 | 21 |
pallium | 6.44e-14 | 21 |
brain grey matter | 1.92e-13 | 29 |
regional part of telencephalon | 1.92e-13 | 29 |
telencephalon | 1.92e-13 | 29 |
Ammon's horn | 4.25e-11 | 7 |
lobe parts of cerebral cortex | 4.25e-11 | 7 |
hippocampal formation | 4.25e-11 | 7 |
limbic system | 4.25e-11 | 7 |
limbic lobe | 4.25e-11 | 7 |
central nervous system | 2.39e-10 | 73 |
pre-chordal neural plate | 4.56e-10 | 49 |
nervous system | 4.73e-10 | 75 |
regional part of forebrain | 6.70e-10 | 39 |
forebrain | 6.70e-10 | 39 |
future forebrain | 6.70e-10 | 39 |
anterior neural tube | 1.21e-09 | 40 |
neurectoderm | 1.44e-09 | 64 |
neural plate | 1.44e-09 | 64 |
presumptive neural plate | 1.44e-09 | 64 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
neural tube | 1.82e-09 | 52 |
neural rod | 1.82e-09 | 52 |
future spinal cord | 1.82e-09 | 52 |
neural keel | 1.82e-09 | 52 |
regional part of nervous system | 4.29e-09 | 54 |
regional part of brain | 2.50e-08 | 46 |
ecto-epithelium | 2.67e-08 | 73 |
brain | 3.84e-08 | 47 |
future brain | 3.84e-08 | 47 |