FFCP PHASE1:Mm9::chr17:26853167..26853205,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=441 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:26853167..26853205,- | |||
|description=CAGE_peak_at_chr17:26853167..26853205,- | |description=CAGE_peak_at_chr17:26853167..26853205,- | ||
|id=chr17:26853167..26853205,- | |id=chr17:26853167..26853205,- | ||
|ontology_enrichment_celltype=CL:0000144!7.60e-10!121;CL:0000012!7.60e-10!121;CL:0002371!2.05e-09!118;CL:0000548!3.86e-08!115;CL:0000004!3.86e-08!115;CL:0000255!3.86e-08!115;CL:0000063!9.58e-08!66;CL:0002563!9.82e-08!9;CL:0002251!9.82e-08!9;CL:0000723!6.30e-07!91;CL:0000048!6.30e-07!91;CL:0000034!7.15e-07!97 | |ontology_enrichment_celltype=CL:0000144!7.60e-10!121;CL:0000012!7.60e-10!121;CL:0002371!2.05e-09!118;CL:0000548!3.86e-08!115;CL:0000004!3.86e-08!115;CL:0000255!3.86e-08!115;CL:0000063!9.58e-08!66;CL:0002563!9.82e-08!9;CL:0002251!9.82e-08!9;CL:0000723!6.30e-07!91;CL:0000048!6.30e-07!91;CL:0000034!7.15e-07!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.76e-19,9;CL:0002251,8.76e-19,9;CL:0000239,4.34e-15,6;CL:0000677,4.34e-15,6;CL:0000584,4.34e-15,6;CL:0000075,6.84e-13,7;CL:0000066,1.41e-12,25;CL:0002076,6.88e-11,15;CL:0000223,2.12e-10,20;CL:0000838,2.71e-09,12;CL:0000791,5.05e-09,9;CL:0000789,5.05e-09,9;CL:0002420,5.05e-09,9;CL:0002419,5.05e-09,9;CL:0000790,5.05e-09,9;CL:0000738,1.43e-08,17;CL:0002087,1.43e-08,17;CL:0000542,1.55e-08,13;CL:0000051,1.55e-08,13;CL:0000084,2.46e-07,11;CL:0000827,2.46e-07,11;CL:0000624,9.19e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!9.82e-08!9;UBERON:0004808!9.82e-08!9;UBERON:0001277!9.82e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.76e-19,9;UBERON:0004808,8.76e-19,9;UBERON:0001277,8.76e-19,9;UBERON:0000485,3.38e-15,11;UBERON:0001242,1.03e-12,13;UBERON:0001262,1.03e-12,13;UBERON:0004786,1.03e-12,13;UBERON:0000344,6.88e-11,15 | |||
|phase1_expression=0.160148847104794,7.32848356042658,4.54999239389536,5.44435580352294,5.00895729946347,2.51818907867835,0.700837921786577,1.67860320474049,0.140788722151667,0.468129052643987,0,0,1.54080656938085,1.31130603628496,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.255129870453209,0.297872853602656,0,0,0.45881856213434,2.8711598205751,2.15380998079537,0.861884930743556,0.190023419456374,0.252030129759931,0,0.635030673459631,0,0,2.02196133825892,0.332469290716985,3.06254034393554,0.418531630736908,3.1253413780952,2.61761871986899,4.70585190424811,1.36609096991689,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0.139986421625363,1.43752564364972,1.17447824240415,2.90144856804538,1.68046899571232,0.257259436035947,0,1.03134418455488,0,0,0.633831403506179,0,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.383062014255563,0.614426133024974,0.131886287730194,0,0,0,1.12552522006336,0.61119299110724,0.294628585473668,0.284743361598206,0.186399445825301,0.151452386666368,0,7.53647670624362,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0.359445373517761,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0.252722758433675,0,0.130120442962704,0,0.360124259610698,0,0.0680364991513279,0,0.374806898238915,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0.207125772535502,0.703578179943289,0,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0,0,0.0810688095458557,0,0,0.134206418760372,0.630869845692382,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0,0.551873492609465,0.321101179975584,0.117211686592203,0.163934945376675,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,1.2178597964584,0,0,0,0.49465875882444,0.161464426695906,0,0.119372344003136,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0.56369293868419,0.299033092087958,0.165458490457098,0.388902376688095,0,0.337912250981556,0.234714477291508,0,0.314578033277133,0,0.576060012515731,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.38983152295901,0.192423683280659,0,0,0,0.179427713218951,0,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0.460325236507177,0,1.03111909406213,0,0,0,0.900642406448441,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,7.32848356042658,4.54999239389536,5.44435580352294,5.00895729946347,2.51818907867835,0.700837921786577,1.67860320474049,0.140788722151667,0.468129052643987,0,0,1.54080656938085,1.31130603628496,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.255129870453209,0.297872853602656,0,0,0.45881856213434,2.8711598205751,2.15380998079537,0.861884930743556,0.190023419456374,0.252030129759931,0,0.635030673459631,0,0,2.02196133825892,0.332469290716985,3.06254034393554,0.418531630736908,3.1253413780952,2.61761871986899,4.70585190424811,1.36609096991689,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0.139986421625363,1.43752564364972,1.17447824240415,2.90144856804538,1.68046899571232,0.257259436035947,0,1.03134418455488,0,0,0.633831403506179,0,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.383062014255563,0.614426133024974,0.131886287730194,0,0,0,1.12552522006336,0.61119299110724,0.294628585473668,0.284743361598206,0.186399445825301,0.151452386666368,0,7.53647670624362,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0.359445373517761,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0.252722758433675,0,0.130120442962704,0,0.360124259610698,0,0.0680364991513279,0,0.374806898238915,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0.207125772535502,0.703578179943289,0,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0,0,0.0810688095458557,0,0,0.134206418760372,0.630869845692382,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0,0.551873492609465,0.321101179975584,0.117211686592203,0.163934945376675,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,1.2178597964584,0,0,0,0.49465875882444,0.161464426695906,0,0.119372344003136,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0.56369293868419,0.299033092087958,0.165458490457098,0.388902376688095,0,0.337912250981556,0.234714477291508,0,0.314578033277133,0,0.576060012515731,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.38983152295901,0.192423683280659,0,0,0,0.179427713218951,0,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0.460325236507177,0,1.03111909406213,0,0,0,0.900642406448441,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr17:26853167..26853205,- | |short_description=p@chr17:26853167..26853205,- | ||
}} | }} |
Latest revision as of 11:56, 4 August 2015
Short description: | p@chr17:26853167..26853205, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:26853167..26853205, - |
Coexpression cluster: | MCL_coexpression_mm9:441 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.76e-19 | 9 |
epithelial cell of alimentary canal | 8.76e-19 | 9 |
brush border epithelial cell | 4.34e-15 | 6 |
gut absorptive cell | 4.34e-15 | 6 |
enterocyte | 4.34e-15 | 6 |
columnar/cuboidal epithelial cell | 6.84e-13 | 7 |
epithelial cell | 1.41e-12 | 25 |
endo-epithelial cell | 6.88e-11 | 15 |
endodermal cell | 2.12e-10 | 20 |
lymphoid lineage restricted progenitor cell | 2.71e-09 | 12 |
mature alpha-beta T cell | 5.05e-09 | 9 |
alpha-beta T cell | 5.05e-09 | 9 |
immature T cell | 5.05e-09 | 9 |
mature T cell | 5.05e-09 | 9 |
immature alpha-beta T cell | 5.05e-09 | 9 |
leukocyte | 1.43e-08 | 17 |
nongranular leukocyte | 1.43e-08 | 17 |
lymphocyte | 1.55e-08 | 13 |
common lymphoid progenitor | 1.55e-08 | 13 |
T cell | 2.46e-07 | 11 |
pro-T cell | 2.46e-07 | 11 |
CD4-positive, alpha-beta T cell | 9.19e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.76e-19 | 9 |
gastrointestinal system epithelium | 8.76e-19 | 9 |
intestinal epithelium | 8.76e-19 | 9 |
simple columnar epithelium | 3.38e-15 | 11 |
intestinal mucosa | 1.03e-12 | 13 |
wall of intestine | 1.03e-12 | 13 |
gastrointestinal system mucosa | 1.03e-12 | 13 |
mucosa | 6.88e-11 | 15 |