FFCP PHASE1:Mm9::chr10:58071854..58071882,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1028 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:58071854..58071882,+ | |||
|description=CAGE_peak_at_chr10:58071854..58071882,+ | |description=CAGE_peak_at_chr10:58071854..58071882,+ | ||
|id=chr10:58071854..58071882,+ | |id=chr10:58071854..58071882,+ | ||
|ontology_enrichment_celltype=CL:0000680!4.49e-13!6;CL:0000183!4.49e-13!6;CL:0000187!4.49e-13!6;CL:0000056!4.49e-13!6;CL:0000222!3.71e-11!7;CL:0000192!1.24e-10!3;CL:0000359!1.24e-10!3;CL:0002539!1.24e-10!3;CL:0000514!1.24e-10!3;CL:0002453!8.05e-09!8;CL:0000355!1.35e-08!9;CL:0000333!5.35e-07!10;CL:0000095!5.35e-07!10;CL:0000243!5.35e-07!10;CL:0000123!5.35e-07!10;CL:0000125!5.35e-07!10;CL:0000030!5.35e-07!10;CL:0000339!5.35e-07!10;CL:0002604!7.94e-07!2;CL:0002605!7.94e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.12e-34,3;CL:0000359,6.12e-34,3;CL:0002539,6.12e-34,3;CL:0000514,6.12e-34,3;CL:0000680,2.19e-17,6;CL:0000187,2.19e-17,6;CL:0000056,2.19e-17,6;CL:0002293,1.04e-15,3;CL:0000222,5.21e-15,7;CL:0000355,7.86e-12,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!1.24e-10!3;UBERON:0004237!1.24e-10!3;UBERON:0004695!1.24e-10!3;UBERON:0002111!1.24e-10!3;UBERON:0004178!1.24e-10!3;UBERON:0001134!1.35e-08!9;UBERON:0002036!1.35e-08!9;UBERON:0002385!1.35e-08!9;UBERON:0000486!1.35e-08!9;UBERON:0001015!1.35e-08!9;UBERON:0004290!1.35e-08!9;UBERON:0003082!1.35e-08!9;UBERON:0000947!4.65e-08!4;UBERON:0001637!4.65e-08!4;UBERON:0003509!4.65e-08!4;UBERON:0004573!4.65e-08!4;UBERON:0004571!4.65e-08!4;UBERON:0010191!4.65e-08!4;UBERON:0004572!4.65e-08!4;UBERON:0000383!1.06e-07!10;UBERON:0002329!5.78e-07!11;UBERON:0003077!5.78e-07!11;UBERON:0003059!5.78e-07!11;UBERON:0007282!5.78e-07!11;UBERON:0009618!5.78e-07!11;UBERON:0007285!5.78e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.12e-34,3;UBERON:0004237,6.12e-34,3;UBERON:0004695,6.12e-34,3;UBERON:0002111,6.12e-34,3;UBERON:0004178,6.12e-34,3;UBERON:0000947,1.12e-25,4;UBERON:0001637,1.12e-25,4;UBERON:0004573,1.12e-25,4;UBERON:0003509,1.12e-25,4;UBERON:0004571,1.12e-25,4;UBERON:0010191,1.12e-25,4;UBERON:0004572,1.12e-25,4;UBERON:0000055,1.05e-20,5;UBERON:0007500,1.05e-20,5;UBERON:0001981,1.05e-20,5;UBERON:0002049,1.05e-20,5;UBERON:0007798,1.05e-20,5;UBERON:0004537,1.05e-20,5;UBERON:0006965,1.05e-20,5;UBERON:0001134,7.86e-12,9;UBERON:0002036,7.86e-12,9;UBERON:0002385,7.86e-12,9;UBERON:0000486,7.86e-12,9;UBERON:0007503,7.86e-12,9;UBERON:0001015,7.86e-12,9;UBERON:0002329,7.86e-12,9;UBERON:0003082,7.86e-12,9;UBERON:0003059,7.86e-12,9;UBERON:0007282,7.86e-12,9;UBERON:0004290,7.86e-12,9;UBERON:0009618,7.86e-12,9;UBERON:0000383,1.03e-10,10;UBERON:0007524,8.45e-10,11;UBERON:0003077,8.45e-10,11;UBERON:0007285,8.45e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43508680436368,5.5757312170733,2.20256102594018,0,0.218025156380447,0.219686182734472,0.777719596297134,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1930122580464,1.03914401841148,0.35333957451034,0,1.28326477414318,0,7.11066703153331,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0.318909537314974,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43508680436368,5.5757312170733,2.20256102594018,0,0.218025156380447,0.219686182734472,0.777719596297134,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1930122580464,1.03914401841148,0.35333957451034,0,1.28326477414318,0,7.11066703153331,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0.318909537314974,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:58071854..58071882,+ | |short_description=p@chr10:58071854..58071882,+ | ||
}} | }} |
Latest revision as of 12:00, 4 August 2015
Short description: | p@chr10:58071854..58071882, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:58071854..58071882, + |
Coexpression cluster: | MCL_coexpression_mm9:1028 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.12e-34 | 3 |
vascular associated smooth muscle cell | 6.12e-34 | 3 |
aortic smooth muscle cell | 6.12e-34 | 3 |
smooth muscle myoblast | 6.12e-34 | 3 |
muscle precursor cell | 2.19e-17 | 6 |
muscle cell | 2.19e-17 | 6 |
myoblast | 2.19e-17 | 6 |
epithelial cell of thymus | 1.04e-15 | 3 |
mesodermal cell | 5.21e-15 | 7 |
multi-potent skeletal muscle stem cell | 7.86e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 6.12e-34 | 3 |
blood vessel smooth muscle | 6.12e-34 | 3 |
arterial system smooth muscle | 6.12e-34 | 3 |
artery smooth muscle tissue | 6.12e-34 | 3 |
aorta smooth muscle tissue | 6.12e-34 | 3 |
aorta | 1.12e-25 | 4 |
artery | 1.12e-25 | 4 |
systemic artery | 1.12e-25 | 4 |
arterial blood vessel | 1.12e-25 | 4 |
systemic arterial system | 1.12e-25 | 4 |
aortic system | 1.12e-25 | 4 |
arterial system | 1.12e-25 | 4 |
vessel | 1.05e-20 | 5 |
epithelial tube open at both ends | 1.05e-20 | 5 |
blood vessel | 1.05e-20 | 5 |
vasculature | 1.05e-20 | 5 |
vascular system | 1.05e-20 | 5 |
blood vasculature | 1.05e-20 | 5 |
vascular cord | 1.05e-20 | 5 |
skeletal muscle tissue | 7.86e-12 | 9 |
striated muscle tissue | 7.86e-12 | 9 |
muscle tissue | 7.86e-12 | 9 |
multilaminar epithelium | 7.86e-12 | 9 |
epithelial vesicle | 7.86e-12 | 9 |
musculature | 7.86e-12 | 9 |
somite | 7.86e-12 | 9 |
myotome | 7.86e-12 | 9 |
presomitic mesoderm | 7.86e-12 | 9 |
presumptive segmental plate | 7.86e-12 | 9 |
dermomyotome | 7.86e-12 | 9 |
trunk paraxial mesoderm | 7.86e-12 | 9 |
musculature of body | 1.03e-10 | 10 |
dense mesenchyme tissue | 8.45e-10 | 11 |
paraxial mesoderm | 8.45e-10 | 11 |
presumptive paraxial mesoderm | 8.45e-10 | 11 |