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FFCP PHASE1:Mm9::chr10:58599616..58599641,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:58599616..58599641,+|id=chr10:58599616..58599641,+|ontology_enrichment_celltype=CL:0000117!1.66e-08!23;CL:0000337!1.66e-08!23;CL:0000393!7.25e-07!39;CL:0000211!7.25e-07!39|ontology_enrichment_celltype_v019_2=CL:0002609,6.11e-13,6;CL:0000117,2.46e-07,23;CL:0000337,2.46e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.17e-16!34;UBERON:0002791!4.58e-15!29;UBERON:0003528!4.58e-15!29;UBERON:0001893!4.58e-15!29;UBERON:0003056!1.49e-12!49;UBERON:0000956!2.08e-12!21;UBERON:0001869!2.08e-12!21;UBERON:0000203!2.08e-12!21;UBERON:0003080!3.26e-12!40;UBERON:0001049!3.59e-12!52;UBERON:0005068!3.59e-12!52;UBERON:0006241!3.59e-12!52;UBERON:0007135!3.59e-12!52;UBERON:0002780!5.92e-12!39;UBERON:0001890!5.92e-12!39;UBERON:0006240!5.92e-12!39;UBERON:0000955!3.71e-11!50;UBERON:0006238!3.71e-11!50;UBERON:0002616!1.36e-10!49;UBERON:0000033!1.62e-10!63;UBERON:0002346!2.50e-10!71;UBERON:0003075!2.50e-10!71;UBERON:0007284!2.50e-10!71;UBERON:0001017!6.75e-10!73;UBERON:0005743!6.75e-10!73;UBERON:0002619!8.61e-10!17;UBERON:0007811!1.84e-09!86;UBERON:0002021!2.02e-09!10;UBERON:0000411!2.02e-09!10;UBERON:0001950!2.02e-09!10;UBERON:0000073!3.69e-09!75;UBERON:0001016!3.69e-09!75;UBERON:0000153!2.40e-08!94;UBERON:0004121!2.63e-08!102;UBERON:0000924!2.63e-08!102;UBERON:0006601!2.63e-08!102|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.40e-37,21;UBERON:0001869,3.40e-37,21;UBERON:0000203,3.40e-37,21;UBERON:0003528,1.00e-36,29;UBERON:0002791,1.00e-36,29;UBERON:0001893,1.00e-36,29;UBERON:0002020,3.13e-34,34;UBERON:0002021,3.16e-32,10;UBERON:0000411,3.16e-32,10;UBERON:0001950,3.16e-32,10;UBERON:0002619,6.89e-31,17;UBERON:0002780,2.68e-26,39;UBERON:0001890,2.68e-26,39;UBERON:0006240,2.68e-26,39;UBERON:0003080,1.53e-25,40;UBERON:0000955,1.61e-23,47;UBERON:0006238,1.61e-23,47;UBERON:0003056,2.30e-22,49;UBERON:0002616,1.08e-21,46;UBERON:0001049,5.91e-21,52;UBERON:0005068,5.91e-21,52;UBERON:0006241,5.91e-21,52;UBERON:0007135,5.91e-21,52;UBERON:0000073,5.03e-20,54;UBERON:0002346,4.92e-18,64;UBERON:0003075,4.92e-18,64;UBERON:0007284,4.92e-18,64;UBERON:0001017,2.70e-15,73;UBERON:0010371,2.81e-15,73;UBERON:0001016,9.00e-15,75;UBERON:0004121,5.61e-12,95;UBERON:0000924,5.61e-12,95;UBERON:0006601,5.61e-12,95;UBERON:0000025,1.31e-11,114;UBERON:0010314,3.16e-11,92;UBERON:0004111,1.56e-10,122|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9028013572429,2.02753862439029,0.917733760808408,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,3.00699875694585,2.02508907497536,2.10324961351382,0.856952953211411,0,2.32732518508413,2.87536413054709,0.919218786610021,0,0.893811366596314,0.921639199537461,0.659431438650969,1.00636407962651,1.56274011167028,0.279182999001381,0,0.45839474333043,2.06240009831567,0.854230084794618,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,1.1930122580464,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0,0,0.647067399789637,0.441683036920787,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,2.63874139437015,0.695297280769106,1.53429274398198,0.83115217823824,0.486723789203273,0.203678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,1.15662048557257,0.768682321709099,0.843315521037559,0.776110112217047,0,0,0,0,0.834141747676794,0.696504333044333,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0.439100230582101,0,0.210289948564127,6.38008596751563,0,0,0.213288250535234,0.696710015581316,0,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.387904974335251,0.280543279561274,0,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.780534591431195,0,1.7717175171902,1.11618338060241,0.983179888294428,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0.819674726883377,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,1.28528526568723,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0.565815239267694,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.238744688006273,0,0,0.741701208042039,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.513554785824136,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.403865799792591,0.228620419965,0,0.487289403698762,0.192423683280659,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0,0,0,0,0,16.3778034358949,14.7304075682297,12.6037012956667,6.8741272937475,2.05524755931193,3.7769694869485,4.72515750162264,4.95353323546643,6.34399372577886,3.62432218226274,0.31136204275253,0,0.170733605754134,0.486213434136588,0,0,0.666740183404846,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.287177344778066,0,0.463537303779422,0.192909220463705,0.412085900803307,0,1.37147700954166,0.70990322463735,0.238436189947321,0,0,0.25384382367503,0.365855945745545,0.789209134313529,0.135804113845862,0,0.593175090620871,0.492522411877817,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr10:58599616..58599641,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr10:58599616..58599641,+
|description=CAGE_peak_at_chr10:58599616..58599641,+
|id=chr10:58599616..58599641,+
|ontology_enrichment_celltype=CL:0000117!1.66e-08!23;CL:0000337!1.66e-08!23;CL:0000393!7.25e-07!39;CL:0000211!7.25e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002609,6.11e-13,6;CL:0000117,2.46e-07,23;CL:0000337,2.46e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.17e-16!34;UBERON:0002791!4.58e-15!29;UBERON:0003528!4.58e-15!29;UBERON:0001893!4.58e-15!29;UBERON:0003056!1.49e-12!49;UBERON:0000956!2.08e-12!21;UBERON:0001869!2.08e-12!21;UBERON:0000203!2.08e-12!21;UBERON:0003080!3.26e-12!40;UBERON:0001049!3.59e-12!52;UBERON:0005068!3.59e-12!52;UBERON:0006241!3.59e-12!52;UBERON:0007135!3.59e-12!52;UBERON:0002780!5.92e-12!39;UBERON:0001890!5.92e-12!39;UBERON:0006240!5.92e-12!39;UBERON:0000955!3.71e-11!50;UBERON:0006238!3.71e-11!50;UBERON:0002616!1.36e-10!49;UBERON:0000033!1.62e-10!63;UBERON:0002346!2.50e-10!71;UBERON:0003075!2.50e-10!71;UBERON:0007284!2.50e-10!71;UBERON:0001017!6.75e-10!73;UBERON:0005743!6.75e-10!73;UBERON:0002619!8.61e-10!17;UBERON:0007811!1.84e-09!86;UBERON:0002021!2.02e-09!10;UBERON:0000411!2.02e-09!10;UBERON:0001950!2.02e-09!10;UBERON:0000073!3.69e-09!75;UBERON:0001016!3.69e-09!75;UBERON:0000153!2.40e-08!94;UBERON:0004121!2.63e-08!102;UBERON:0000924!2.63e-08!102;UBERON:0006601!2.63e-08!102
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.40e-37,21;UBERON:0001869,3.40e-37,21;UBERON:0000203,3.40e-37,21;UBERON:0003528,1.00e-36,29;UBERON:0002791,1.00e-36,29;UBERON:0001893,1.00e-36,29;UBERON:0002020,3.13e-34,34;UBERON:0002021,3.16e-32,10;UBERON:0000411,3.16e-32,10;UBERON:0001950,3.16e-32,10;UBERON:0002619,6.89e-31,17;UBERON:0002780,2.68e-26,39;UBERON:0001890,2.68e-26,39;UBERON:0006240,2.68e-26,39;UBERON:0003080,1.53e-25,40;UBERON:0000955,1.61e-23,47;UBERON:0006238,1.61e-23,47;UBERON:0003056,2.30e-22,49;UBERON:0002616,1.08e-21,46;UBERON:0001049,5.91e-21,52;UBERON:0005068,5.91e-21,52;UBERON:0006241,5.91e-21,52;UBERON:0007135,5.91e-21,52;UBERON:0000073,5.03e-20,54;UBERON:0002346,4.92e-18,64;UBERON:0003075,4.92e-18,64;UBERON:0007284,4.92e-18,64;UBERON:0001017,2.70e-15,73;UBERON:0010371,2.81e-15,73;UBERON:0001016,9.00e-15,75;UBERON:0004121,5.61e-12,95;UBERON:0000924,5.61e-12,95;UBERON:0006601,5.61e-12,95;UBERON:0000025,1.31e-11,114;UBERON:0010314,3.16e-11,92;UBERON:0004111,1.56e-10,122
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9028013572429,2.02753862439029,0.917733760808408,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,3.00699875694585,2.02508907497536,2.10324961351382,0.856952953211411,0,2.32732518508413,2.87536413054709,0.919218786610021,0,0.893811366596314,0.921639199537461,0.659431438650969,1.00636407962651,1.56274011167028,0.279182999001381,0,0.45839474333043,2.06240009831567,0.854230084794618,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,1.1930122580464,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0,0,0.647067399789637,0.441683036920787,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,2.63874139437015,0.695297280769106,1.53429274398198,0.83115217823824,0.486723789203273,0.203678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,1.15662048557257,0.768682321709099,0.843315521037559,0.776110112217047,0,0,0,0,0.834141747676794,0.696504333044333,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0.439100230582101,0,0.210289948564127,6.38008596751563,0,0,0.213288250535234,0.696710015581316,0,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.387904974335251,0.280543279561274,0,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.780534591431195,0,1.7717175171902,1.11618338060241,0.983179888294428,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0.819674726883377,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,1.28528526568723,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0.565815239267694,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.238744688006273,0,0,0.741701208042039,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.513554785824136,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.403865799792591,0.228620419965,0,0.487289403698762,0.192423683280659,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0,0,0,0,0,16.3778034358949,14.7304075682297,12.6037012956667,6.8741272937475,2.05524755931193,3.7769694869485,4.72515750162264,4.95353323546643,6.34399372577886,3.62432218226274,0.31136204275253,0,0.170733605754134,0.486213434136588,0,0,0.666740183404846,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.287177344778066,0,0.463537303779422,0.192909220463705,0.412085900803307,0,1.37147700954166,0.70990322463735,0.238436189947321,0,0,0.25384382367503,0.365855945745545,0.789209134313529,0.135804113845862,0,0.593175090620871,0.492522411877817,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0
|short_description=p@chr10:58599616..58599641,+
}}

Latest revision as of 12:04, 4 August 2015

Short description:p@chr10:58599616..58599641, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr10:58599616..58599641, +
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr10:58599616..58599641+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G16.38
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex6.11e-136
CNS neuron (sensu Vertebrata)2.46e-0723
neuroblast (sensu Vertebrata)2.46e-0723

Uber anatomy
Ontology termp-valuen
cerebral cortex3.40e-3721
cerebral hemisphere3.40e-3721
pallium3.40e-3721
brain grey matter1.00e-3629
regional part of telencephalon1.00e-3629
telencephalon1.00e-3629
gray matter3.13e-3434
occipital lobe3.16e-3210
visual cortex3.16e-3210
neocortex3.16e-3210
regional part of cerebral cortex6.89e-3117
regional part of forebrain2.68e-2639
forebrain2.68e-2639
future forebrain2.68e-2639
anterior neural tube1.53e-2540
brain1.61e-2347
future brain1.61e-2347
pre-chordal neural plate2.30e-2249
regional part of brain1.08e-2146
neural tube5.91e-2152
neural rod5.91e-2152
future spinal cord5.91e-2152
neural keel5.91e-2152
regional part of nervous system5.03e-2054
neurectoderm4.92e-1864
neural plate4.92e-1864
presumptive neural plate4.92e-1864
central nervous system2.70e-1573
ecto-epithelium2.81e-1573
nervous system9.00e-1575
ectoderm-derived structure5.61e-1295
ectoderm5.61e-1295
presumptive ectoderm5.61e-1295
tube1.31e-11114
structure with developmental contribution from neural crest3.16e-1192
anatomical conduit1.56e-10122
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