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FFCP PHASE1:Mm9::chr10:6373383..6373454,-: Difference between revisions

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{{FFCP|EntrezGene=270685|HGNC=|MCL_coexpression_id=1036|UniProt=Q3V3R1|association_with_transcript=0bp_to_ENSMUST00000043735,ENSMUST00000117291,ENSMUST00000120585_5end|description=CAGE_peak_1_at_Mthfd1l_5end|id=chr10:6373383..6373454,-|ontology_enrichment_celltype=CL:0000988!7.17e-13!32;CL:0002032!7.17e-13!32;CL:0000037!7.17e-13!32;CL:0000566!7.17e-13!32;CL:0000837!7.17e-13!32;CL:0002031!1.80e-09!25;CL:0002320!1.34e-07!46;CL:0000134!1.34e-07!46;CL:0000838!1.63e-07!12;CL:0000542!2.16e-07!13;CL:0000051!2.16e-07!13;CL:0000084!3.72e-07!11;CL:0000827!3.72e-07!11;CL:0000049!7.52e-07!19|ontology_enrichment_celltype_v019_2=CL:0000988,7.17e-13,32;CL:0002032,7.17e-13,32;CL:0000037,7.17e-13,32;CL:0000837,7.17e-13,32;CL:0002031,1.80e-09,25;CL:0002320,1.35e-07,46;CL:0000134,1.35e-07,46;CL:0000838,1.63e-07,12;CL:0000542,2.16e-07,13;CL:0000051,2.16e-07,13;CL:0000084,3.72e-07,11;CL:0000827,3.72e-07,11;CL:0000049,7.52e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.60e-11!45;UBERON:0003061!2.60e-11!45;UBERON:0002193!3.58e-11!48;UBERON:0004177!5.08e-11!29;UBERON:0002405!7.40e-09!70;UBERON:0002370!6.41e-08!23;UBERON:0000974!6.41e-08!23;UBERON:0004807!6.41e-08!23;UBERON:0005058!6.41e-08!23;UBERON:0003351!6.41e-08!23;UBERON:0009113!6.41e-08!23;UBERON:0003295!6.41e-08!23;UBERON:0009722!6.41e-08!23;UBERON:0005562!6.41e-08!23;UBERON:0007690!6.41e-08!23;UBERON:0002384!1.34e-07!46;UBERON:0005057!1.48e-07!51;UBERON:0000072!1.62e-07!27;UBERON:0006562!3.20e-07!24;UBERON:0001557!3.20e-07!24;UBERON:0001042!3.20e-07!24;UBERON:0008814!3.20e-07!24;UBERON:0009145!3.20e-07!24;UBERON:0003081!4.04e-07!88;UBERON:0003408!5.42e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.60e-11,45;UBERON:0003061,2.60e-11,45;UBERON:0002193,3.58e-11,48;UBERON:0002405,3.58e-11,48;UBERON:0004177,5.08e-11,29;UBERON:0005057,5.08e-11,29;UBERON:0002370,6.41e-08,23;UBERON:0000974,6.41e-08,23;UBERON:0004807,6.41e-08,23;UBERON:0005058,6.41e-08,23;UBERON:0003351,6.41e-08,23;UBERON:0009113,6.41e-08,23;UBERON:0003295,6.41e-08,23;UBERON:0009722,6.41e-08,23;UBERON:0005562,6.41e-08,23;UBERON:0007690,6.41e-08,23;UBERON:0000077,1.01e-07,35;UBERON:0002384,1.35e-07,46;UBERON:0000072,1.62e-07,27;UBERON:0006562,3.20e-07,24;UBERON:0001557,3.20e-07,24;UBERON:0001042,3.20e-07,24;UBERON:0008814,3.20e-07,24;UBERON:0009145,3.20e-07,24;UBERON:0003408,5.42e-07,24;UBERON:0003081,7.24e-07,87|phase1_expression=5.12476310735341,0.348975407639361,1.36499771816861,0.30246421130683,0,12.0873075776561,9.57811826441655,37.3166404746155,34.7748143714617,40.4931630537049,62.6657763705348,84.4787163760613,27.2209160590617,33.656854931314,56.9617692704783,44.9495093605414,50.3684552252266,27.7606705515249,29.8909465260511,30.1316652776601,5.95303031057488,39.3192166755506,35.5231713228952,6.23970448894286,11.6998733344257,1.72269589234506,3.01533397311352,4.09395342103189,4.75058548640935,6.30075324399827,15.0776747245607,123.195950651168,96.5651716507775,79.2408405077194,12.1317680295535,14.4624141461888,17.150225926039,10.8818223991596,13.2827008569046,16.7527598071615,4.1176204162171,6.14740936462601,3.88408282424923,18.2550386064587,15.5106704765857,18.9053154726532,4.69434806608824,3.48840250208714,1.09843091367236,1.55543919259427,10.2190087786515,5.75010257459886,24.160695272314,29.7398478224651,44.7004752859477,19.0371982666601,16.9054729563866,4.64104883049698,4.45096213891115,4.7609188134483,2.53532561402472,7.79342423759004,14.2287167377782,1.7997994345628,8.89979726310277,5.6838409195688,5.99200221036809,2.30530983192933,2.17748185847803,2.43010688997043,2.3135745748652,6.28432165688368,6.18431914664518,1.95985278743926,4.50473713785711,4.5960939330501,11.0115880999389,5.2351808614927,6.29786786350598,4.2203612073662,2.92760459527711,3.64639359389732,8.65467296904281,3.93933827022176,7.33431589328689,3.53554302568401,4.12877874317399,4.65998614563251,38.6960847932571,49.4238003098377,3.76823835312181,0.860423876981386,11.5595126730318,1.07940638327563,0,0.448026887097336,5.05599912474307,42.2667199993583,30.1351765339328,33.9205991529927,10.7040999030277,10.2661181931454,7.64415719119937,14.2213340630666,17.1027922398859,12.6679932737549,13.1436355703844,4.79572294820052,20.1971549244794,5.64080128446334,22.3796071528315,15.5277393939192,13.1450833435953,11.4549206819993,11.0533384707563,2.26199864393416,6.92145909656247,3.32578520915797,21.230653246797,17.1472860944254,18.5506875506731,17.455509112868,3.72783522436244,18.1524094147159,12.7762491156208,4.34276993854605,54.8753270237115,43.7928993625188,46.6347733358147,6.89036941262184,5.49000723382352,2.89005009859588,6.95297280769106,5.11430914660661,5.61027720310812,3.89379031362618,10.0820970211813,16.1729061793121,28.8103944614389,2.73574412652416,12.1012011955314,12.644615743841,12.0641626969584,14.0155480587215,13.0630078370549,11.2740073850668,9.55757590509234,5.95017752699736,18.1077114063587,9.07709184805532,9.85326295318113,8.76782929710299,10.56579547057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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:270685
|HGNC=
|MCL_coexpression_id=1036
|TSSclassifier=NA
|UniProt=uniprot:Q3V3R1
|association_with_transcript=0bp_to_ENSMUST00000043735,ENSMUST00000117291,ENSMUST00000120585_5end
|cluster_id=chr10:6373383..6373454,-
|description=CAGE_peak_1_at_Mthfd1l_5end
|id=chr10:6373383..6373454,-
|ontology_enrichment_celltype=CL:0000988!7.17e-13!32;CL:0002032!7.17e-13!32;CL:0000037!7.17e-13!32;CL:0000566!7.17e-13!32;CL:0000837!7.17e-13!32;CL:0002031!1.80e-09!25;CL:0002320!1.34e-07!46;CL:0000134!1.34e-07!46;CL:0000838!1.63e-07!12;CL:0000542!2.16e-07!13;CL:0000051!2.16e-07!13;CL:0000084!3.72e-07!11;CL:0000827!3.72e-07!11;CL:0000049!7.52e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000988,7.17e-13,32;CL:0002032,7.17e-13,32;CL:0000037,7.17e-13,32;CL:0000837,7.17e-13,32;CL:0002031,1.80e-09,25;CL:0002320,1.35e-07,46;CL:0000134,1.35e-07,46;CL:0000838,1.63e-07,12;CL:0000542,2.16e-07,13;CL:0000051,2.16e-07,13;CL:0000084,3.72e-07,11;CL:0000827,3.72e-07,11;CL:0000049,7.52e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!2.60e-11!45;UBERON:0003061!2.60e-11!45;UBERON:0002193!3.58e-11!48;UBERON:0004177!5.08e-11!29;UBERON:0002405!7.40e-09!70;UBERON:0002370!6.41e-08!23;UBERON:0000974!6.41e-08!23;UBERON:0004807!6.41e-08!23;UBERON:0005058!6.41e-08!23;UBERON:0003351!6.41e-08!23;UBERON:0009113!6.41e-08!23;UBERON:0003295!6.41e-08!23;UBERON:0009722!6.41e-08!23;UBERON:0005562!6.41e-08!23;UBERON:0007690!6.41e-08!23;UBERON:0002384!1.34e-07!46;UBERON:0005057!1.48e-07!51;UBERON:0000072!1.62e-07!27;UBERON:0006562!3.20e-07!24;UBERON:0001557!3.20e-07!24;UBERON:0001042!3.20e-07!24;UBERON:0008814!3.20e-07!24;UBERON:0009145!3.20e-07!24;UBERON:0003081!4.04e-07!88;UBERON:0003408!5.42e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.60e-11,45;UBERON:0003061,2.60e-11,45;UBERON:0002193,3.58e-11,48;UBERON:0002405,3.58e-11,48;UBERON:0004177,5.08e-11,29;UBERON:0005057,5.08e-11,29;UBERON:0002370,6.41e-08,23;UBERON:0000974,6.41e-08,23;UBERON:0004807,6.41e-08,23;UBERON:0005058,6.41e-08,23;UBERON:0003351,6.41e-08,23;UBERON:0009113,6.41e-08,23;UBERON:0003295,6.41e-08,23;UBERON:0009722,6.41e-08,23;UBERON:0005562,6.41e-08,23;UBERON:0007690,6.41e-08,23;UBERON:0000077,1.01e-07,35;UBERON:0002384,1.35e-07,46;UBERON:0000072,1.62e-07,27;UBERON:0006562,3.20e-07,24;UBERON:0001557,3.20e-07,24;UBERON:0001042,3.20e-07,24;UBERON:0008814,3.20e-07,24;UBERON:0009145,3.20e-07,24;UBERON:0003408,5.42e-07,24;UBERON:0003081,7.24e-07,87
|phase1_expression=5.12476310735341,0.348975407639361,1.36499771816861,0.30246421130683,0,12.0873075776561,9.57811826441655,37.3166404746155,34.7748143714617,40.4931630537049,62.6657763705348,84.4787163760613,27.2209160590617,33.656854931314,56.9617692704783,44.9495093605414,50.3684552252266,27.7606705515249,29.8909465260511,30.1316652776601,5.95303031057488,39.3192166755506,35.5231713228952,6.23970448894286,11.6998733344257,1.72269589234506,3.01533397311352,4.09395342103189,4.75058548640935,6.30075324399827,15.0776747245607,123.195950651168,96.5651716507775,79.2408405077194,12.1317680295535,14.4624141461888,17.150225926039,10.8818223991596,13.2827008569046,16.7527598071615,4.1176204162171,6.14740936462601,3.88408282424923,18.2550386064587,15.5106704765857,18.9053154726532,4.69434806608824,3.48840250208714,1.09843091367236,1.55543919259427,10.2190087786515,5.75010257459886,24.160695272314,29.7398478224651,44.7004752859477,19.0371982666601,16.9054729563866,4.64104883049698,4.45096213891115,4.7609188134483,2.53532561402472,7.79342423759004,14.2287167377782,1.7997994345628,8.89979726310277,5.6838409195688,5.99200221036809,2.30530983192933,2.17748185847803,2.43010688997043,2.3135745748652,6.28432165688368,6.18431914664518,1.95985278743926,4.50473713785711,4.5960939330501,11.0115880999389,5.2351808614927,6.29786786350598,4.2203612073662,2.92760459527711,3.64639359389732,8.65467296904281,3.93933827022176,7.33431589328689,3.53554302568401,4.12877874317399,4.65998614563251,38.6960847932571,49.4238003098377,3.76823835312181,0.860423876981386,11.5595126730318,1.07940638327563,0,0.448026887097336,5.05599912474307,42.2667199993583,30.1351765339328,33.9205991529927,10.7040999030277,10.2661181931454,7.64415719119937,14.2213340630666,17.1027922398859,12.6679932737549,13.1436355703844,4.79572294820052,20.1971549244794,5.64080128446334,22.3796071528315,15.5277393939192,13.1450833435953,11.4549206819993,11.0533384707563,2.26199864393416,6.92145909656247,3.32578520915797,21.230653246797,17.1472860944254,18.5506875506731,17.455509112868,3.72783522436244,18.1524094147159,12.7762491156208,4.34276993854605,54.8753270237115,43.7928993625188,46.6347733358147,6.89036941262184,5.49000723382352,2.89005009859588,6.95297280769106,5.11430914660661,5.61027720310812,3.89379031362618,10.0820970211813,16.1729061793121,28.8103944614389,2.73574412652416,12.1012011955314,12.644615743841,12.0641626969584,14.0155480587215,13.0630078370549,11.2740073850668,9.55757590509234,5.95017752699736,18.1077114063587,9.07709184805532,9.85326295318113,8.76782929710299,10.5657954705727,10.447564995665,11.9353639116607,11.5439874754726,43.5372176134206,37.3154465316337,41.7720344111521,17.1914391204467,18.0585066185444,13.1445304866541,12.7842157216014,11.0187969778546,7.55908853148153,9.99895962426754,8.85302224618743,3.61972561338225,5.59503489705834,1.97000956894914,2.02672023864639,2.19299981137998,1.53685080703735,1.47627060636409,3.57492912559016,4.52780294468852,2.97376904685418,5.55346189993443,12.5840067815788,17.1855137176724,22.4229382700442,20.1683524623343,11.5636582799333,8.56015317506516,6.16887780007865,9.88193728344065,10.5560787696113,8.35617182572834,7.79856348476481,7.19055526923377,4.10662294761919,3.58454291857861,15.9321036800589,17.3657739166788,15.7790829942313,12.8300336542548,10.6673867942194,8.27602674705759,5.31186911843761,2.21415221969403,0.941992367048249,2.22114895059241,4.15033677922008,46.2160942833581,50.1225437538668,53.2923206352103,45.2378070696361,46.7883689919689,38.4485036189944,30.4957905697859,26.9144476446559,24.7105271869273,12.9391385874619,11.9085103253921,5.61667811606209,2.77836765741823,1.25578189465339,3.37710464954357,9.97667226899665,16.8647356475731,21.1854469374634,15.9560380628677,15.9589368836181,9.38035041674168,2.61848004974615,4.48807390072937,7.40885177299098,10.1873757238436,5.42146213435456,9.83179888294428,3.62638461918381,2.74833211304872,9.04747703635634,6.52686820582452,1.47529281905711,3.03530420935206,4.17431533968259,4.57125577709592,23.9345020249946,2.7771801992481,23.9786246756355,14.055794794679,19.3881057959519,25.5696613809231,22.5026660823218,29.7230357328274,18.2164815753702,15.7818163272108,20.5549644532192,5.14114106274891,5.67760340833074,11.9303954457061,9.44744364250741,8.24850614862677,11.9470624505967,16.5090832585387,16.0231485191318,9.43025398779491,11.5167738223501,9.83792473420568,11.1124166062335,11.2695456138027,17.1118741624666,13.2735438333043,10.5418608574999,13.4076206222643,1.70219802876894,10.443543453816,7.89087971074802,6.64444808597936,5.49754724291048,5.70780216326626,5.43011767986999,4.87143918583359,14.3149741918863,4.87213762986786,2.8668691747145,2.4732937941222,5.8127193610526,8.92631288936707,9.90790455226033,6.72977688954751,5.82961673259701,4.63563255026274,37.4207228947297,22.4961686079913,39.6316288571183,63.2918015535762,46.2026489697065,41.6376275235871,40.9648016285191,41.8454842447737,35.7937932153458,2.86401185404534,18.5056556244964,16.4688768372747,13.9326889660124,14.2180041289839,8.95286511359328,10.3845546716312,10.2490285099417,4.97336289769656,6.86959358446502,2.4853572523477,2.25477175473676,7.32631075615496,9.26567546559747,9.72255941720238,9.17034746691891,9.63049915297436,9.97536528488909,7.03103678157331,5.34782656571125,1.93267296660805,6.04863013141517,16.1165671520371,20.2725215290164,21.1584571759544,35.2085430269824,26.6749776544547,22.2523117355017,25.0006535001535,23.6303243479324,20.1932899896295,24.9958325828399,18.4511918800418,19.1017446249915,17.4143433368996,12.0383209247016,4.76133805591944,13.763129109192,19.6473345974752,9.06576928366024,4.25017106870819,8.82107634620555,6.22715522508701,8.36036678408357,2.50786052017682,11.8597886949584,5.9842280745933,8.59343270159095,7.38968684077857,4.11049511862385,2.2661816921691,3.37511250115903,3.15224842256954,4.53142408984205,3.10656187051092,12.1431196673487,10.3746467084268,16.0489589408886,14.1001895899611,13.6248555708189,11.3982975239009,12.0013233012872,10.7138229764225,16.0459604795908,16.172621552883,6.84394109703647,9.99719609346204,9.64507526939789,9.73182316554013,10.2809489430548,8.09699275181225,8.11190281613988,8.68091492086673,7.82963211526283,11.6287146906174,6.51451579532289,9.05126611412621,7.39152188836695,10.9009812474246,9.12860990028707,11.6768158890514,9.51225458938417,8.41823076601097,9.50628796921032,16.8342681497322,8.42308628681636,9.25942134330297,5.72923460437565,10.2258315182738,12.1531164918119,8.99318080576605,9.82512755470715,9.66919743217342,8.03410994689142,9.48543102213917,11.8252596166415
|short_description=p1@Mthfd1l
}}

Revision as of 14:34, 4 August 2015

Short description:p1@Mthfd1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mthfd1l_5end
Coexpression cluster:MCL_coexpression_mm9:1036
Association with transcript: 0bp_to_ENSMUST00000043735, ENSMUST00000117291, ENSMUST00000120585_5end
EntrezGene:270685
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mthfd1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E937.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E734.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F240.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E662.67
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F184.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.22
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E833.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A156.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A344.95
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A550.37
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.76
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A429.89
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H239.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I935.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3123.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G696.57
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E979.24
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.91
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A224.16
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A144.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.04
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.65
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D938.70
Mouse Schwann, donor2.CNhs12573.11746-123F949.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I742.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E330.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.92
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H920.20
adrenal gland, adult.CNhs10508.49-24D75.64
adrenal gland, embryo E14.CNhs11038.406-44C522.38
adrenal gland, embryo E16.CNhs11004.1254-43D615.53
adrenal gland, embryo E17.CNhs11043.1263-45I113.15
adrenal gland, embryo E18.CNhs11026.1262-18F511.45
adrenal gland, neonate N00.CNhs11191.1311-23C111.05
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G221.23
bone (os femoris), neonate N02.CNhs11227.1985-43F517.15
bone (os femoris), neonate N16.CNhs11225.1525-43A618.55
bone (os femoris), neonate N20.CNhs11195.1350-25C317.46
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B218.15
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C754.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D143.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D446.63
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.08
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.17
epididymis, adult.CNhs10490.58-23B228.81
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C612.10
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C912.06
eyeball, embryo E17.CNhs11023.1261-18D414.02
eyeball, neonate N00.CNhs11207.633-15C613.06
eyeball, neonate N01.CNhs11140.1532-43E711.27
eyeball, neonate N02.CNhs11205.1551-44G89.56
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E218.11
forelimb, embryo E12.CNhs10600.359-14H29.08
forelimb, embryo E13.CNhs10589.384-1E29.85
forelimb, embryo E14.CNhs10577.413-26A88.77
forelimb, embryo E15.CNhs11007.437-20E710.57
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B511.94
gonad, embryo E13.CNhs11044.1564-45I611.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C843.54
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D237.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D541.77
heart, embryo E11.CNhs10586.331-24E917.19
heart, embryo E12.CNhs11015.353-12F518.06
heart, embryo E13.CNhs11013.376-3I913.14
heart, embryo E14.CNhs10597.403-26D412.78
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C67.56
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I512.58
intestine, embryo E13.CNhs11010.381-16D517.19
intestine, embryo E15.CNhs10602.976-16D822.42
intestine, embryo E16.CNhs10585.463-22H420.17
intestine, embryo E17.CNhs10582.482-18D311.56
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E99.88
intestine, neonate N06.CNhs11102.688-20B810.56
intestine, neonate N07.CNhs11095.720-20F28.36
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I915.93
kidney, embryo E15.CNhs10997.434-16F817.37
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I212.83
kidney, embryo E18.CNhs11001.1288-20C710.67
kidney, neonate N00.CNhs11214.646-21G78.28
kidney, neonate N10.CNhs11206.758-6D55.31
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F846.22
liver, embryo E13.CNhs10524.378-3H650.12
liver, embryo E14.CNhs10594.409-16E153.29
liver, embryo E15.CNhs10520.433-16D745.24
liver, embryo E16.CNhs10523.462-17F546.79
liver, embryo E17.CNhs10510.481-18A338.45
liver, embryo E18.CNhs10579.499-43G430.50
liver, neonate N00.CNhs11117.641-24F426.91
liver, neonate N03.CNhs11123.1345-25G224.71
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B19.98
lung, embryo E12.CNhs10522.354-16G216.86
lung, embryo E14.CNhs10604.404-26F821.19
lung, embryo E15.CNhs11020.432-17C515.96
lung, embryo E16.CNhs10998.458-17B615.96
lung, embryo E17.CNhs10605.480-44A69.38
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A310.19
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A49.83
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.57
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D822.50
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.55
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I75.68
ovary, embryo E18.CNhs11040.505-44H711.93
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F416.51
pancreas, embryo E15.CNhs11042.1556-45F216.02
pancreas, embryo E16.CNhs11003.460-26E59.43
pancreas, embryo E17.CNhs10599.1558-45G311.52
pancreas, embryo E18.CNhs10580.1535-43I79.84
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D711.27
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B613.27
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E610.44
pituitary gland, embryo E13.CNhs11009.370-44C77.89
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I714.31
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G45.81
skin, neonate N03.CNhs11215.662-22H38.93
skin, neonate N06.CNhs11097.693-20I59.91
skin, neonate N10.CNhs11108.762-6C46.73
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G237.42
spleen, embryo E16.CNhs11035.461-43C122.50
spleen, embryo E18.CNhs11011.1271-21F239.63
spleen, neonate N10.CNhs11116.752-24D163.29
spleen, neonate N20.CNhs11112.824-19H146.20
spleen, neonate N25.CNhs11099.1354-25G341.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C640.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C941.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.79
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E318.51
stomach, embryo E15.CNhs10603.1252-16G816.47
stomach, embryo E16.CNhs11022.459-17D413.93
stomach, embryo E17.CNhs11006.1035-18D514.22
stomach, embryo E18.CNhs10999.1286-20C68.95
stomach, neonate N03.CNhs11193.1340-24B810.38
stomach, neonate N07.CNhs11210.718-18A910.25
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I16.87
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C59.27
testis, embryo E16.CNhs11033.470-26G59.72
testis, embryo E17.CNhs11029.486-18I59.17
testis, embryo E18.CNhs11027.503-18G59.63
testis, neonate N00.CNhs11189.1300-22B79.98
testis, neonate N07.CNhs11222.726-26I47.03
testis, neonate N10.CNhs11204.763-44D95.35
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B516.12
thymus, embryo E14.CNhs11041.402-44I420.27
thymus, embryo E15.CNhs11005.430-45I221.16
thymus, embryo E16.CNhs11002.456-26C535.21
thymus, embryo E17.CNhs10581.478-18C126.67
thymus, embryo E18.CNhs10595.1273-19G422.25
thymus, neonate N02.CNhs11181.1541-43F825.00
thymus, neonate N03.CNhs11137.2104-43C723.63
thymus, neonate N06.CNhs11197.681-26C420.19
thymus, neonate N07.CNhs11211.713-19D325.00
thymus, neonate N10.CNhs11194.748-24E418.45
thymus, neonate N20.CNhs11186.820-7A219.10
thymus, neonate N25.CNhs11125.1362-25G717.41
thymus, neonate N30.CNhs11132.1393-42G212.04
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F719.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.07
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F58.82
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D58.36
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I812.14
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H216.05
whole body, embryo E14.5.CNhs10578.420-27D214.10
whole body, embryo E14.CNhs10519.395-14B113.62
whole body, embryo E16.CNhs10514.453-14F211.40
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.63
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F912.15
whole body, embryo E17.CNhs10517.475-3I58.99
whole body, embryo E18.CNhs10516.493-3B39.83
whole body, neonate N00.CNhs10525.657-19C29.67
whole body, neonate N01.CNhs10576.659-23C68.03
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B411.83





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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