FFCP PHASE1:Mm9::chr7:16894727..16894739,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=154 | |MCL_coexpression_id=154 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:16894727..16894739,- | |||
|description=CAGE_peak_at_chr7:16894727..16894739,- | |description=CAGE_peak_at_chr7:16894727..16894739,- | ||
|id=chr7:16894727..16894739,- | |id=chr7:16894727..16894739,- | ||
|ontology_enrichment_celltype=CL:0000144!2.65e-16!121;CL:0000012!2.65e-16!121;CL:0000034!8.66e-16!97;CL:0002371!2.70e-14!118;CL:0000548!8.08e-13!115;CL:0000004!8.08e-13!115;CL:0000255!8.08e-13!115;CL:0000723!1.93e-12!91;CL:0000048!1.93e-12!91;CL:0000063!1.79e-11!66;CL:0000988!1.06e-10!32;CL:0002032!1.06e-10!32;CL:0000037!1.06e-10!32;CL:0000566!1.06e-10!32;CL:0000837!1.06e-10!32;CL:0002320!7.31e-10!46;CL:0000134!7.31e-10!46;CL:0000219!1.11e-09!54;CL:0000107!8.04e-09!9;CL:0000838!2.43e-07!12;CL:0002031!7.86e-07!25 | |ontology_enrichment_celltype=CL:0000144!2.65e-16!121;CL:0000012!2.65e-16!121;CL:0000034!8.66e-16!97;CL:0002371!2.70e-14!118;CL:0000548!8.08e-13!115;CL:0000004!8.08e-13!115;CL:0000255!8.08e-13!115;CL:0000723!1.93e-12!91;CL:0000048!1.93e-12!91;CL:0000063!1.79e-11!66;CL:0000988!1.06e-10!32;CL:0002032!1.06e-10!32;CL:0000037!1.06e-10!32;CL:0000566!1.06e-10!32;CL:0000837!1.06e-10!32;CL:0002320!7.31e-10!46;CL:0000134!7.31e-10!46;CL:0000219!1.11e-09!54;CL:0000107!8.04e-09!9;CL:0000838!2.43e-07!12;CL:0002031!7.86e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.48e-22,97;CL:0000723,1.26e-18,91;CL:0000048,1.26e-18,91;CL:0000107,1.38e-18,9;CL:0000988,1.60e-12,32;CL:0002032,1.60e-12,32;CL:0000037,1.60e-12,32;CL:0000837,1.60e-12,32;CL:0002320,9.50e-11,46;CL:0000134,9.50e-11,46;CL:0000049,5.09e-09,19;CL:0000219,1.12e-08,54;CL:0000192,1.25e-08,3;CL:0000359,1.25e-08,3;CL:0002539,1.25e-08,3;CL:0000514,1.25e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.31e-10!46;UBERON:0002410!8.04e-09!9;UBERON:0000010!1.46e-07!11 | |ontology_enrichment_uberon=UBERON:0002384!7.31e-10!46;UBERON:0002410!8.04e-09!9;UBERON:0000010!1.46e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.38e-18,9;UBERON:0000010,5.66e-15,11;UBERON:0002384,9.50e-11,46;UBERON:0000055,4.48e-09,5;UBERON:0007500,4.48e-09,5;UBERON:0001981,4.48e-09,5;UBERON:0002049,4.48e-09,5;UBERON:0007798,4.48e-09,5;UBERON:0004537,4.48e-09,5;UBERON:0006965,4.48e-09,5;UBERON:0000013,7.16e-09,3;UBERON:0000011,7.62e-09,3;UBERON:0001135,1.25e-08,3;UBERON:0004237,1.25e-08,3;UBERON:0004695,1.25e-08,3;UBERON:0002111,1.25e-08,3;UBERON:0004178,1.25e-08,3 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0,0,0.500895729946347,0.33575854382378,0,0.903863264091034,0.281577444303333,0.468129052643987,1.54096171402954,0.239316476986009,0.684802919724823,0.524522414513984,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0,1.48936426801328,2.35079810225042,0,0.22940928106717,1.14846392823004,0,0,0,0,0,12.7006134691926,11.0711661765223,0,2.02196133825892,0.498703936075477,1.22501613757421,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0,0,2.26614272356039,1.4192770370732,2.20256102594018,0,0.65407546914134,0.219686182734472,0.777719596297134,0,0,1.34226084846189,1.45072428402269,0,0,0.573066879877513,0,0,0,0,1.0165335962074,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,6.08715426273523,0,0,0,0,0,0,0.170430322578058,0.779358013808606,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,0,0,0,2.39630249011841,11.3981518888747,6.73472203487243,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,2.1066395619397,6.94839349209731,7.95657798307659,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0.964887042726734,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0.252470927204373,4.10160685241134,0.780877488593277,1.93881057959519,4.77937595905104,1.33679204449436,2.26461224631066,1.21443210502468,2.63030272120181,3.95287777946523,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,3.56954702987096,2.79902904647316,2.3493995546752,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0.56369293868419,0.448549638131936,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0.202725215290164,0,0,0.358053391334963,0,0,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,0,0.221985953374065,0.897138566094757,0.335769232728157,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.640595388419176,0.348975407639361,0,0,0.500895729946347,0.33575854382378,0,0.903863264091034,0.281577444303333,0.468129052643987,1.54096171402954,0.239316476986009,0.684802919724823,0.524522414513984,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0,1.48936426801328,2.35079810225042,0,0.22940928106717,1.14846392823004,0,0,0,0,0,12.7006134691926,11.0711661765223,0,2.02196133825892,0.498703936075477,1.22501613757421,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0,0,2.26614272356039,1.4192770370732,2.20256102594018,0,0.65407546914134,0.219686182734472,0.777719596297134,0,0,1.34226084846189,1.45072428402269,0,0,0.573066879877513,0,0,0,0,1.0165335962074,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,6.08715426273523,0,0,0,0,0,0,0.170430322578058,0.779358013808606,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,0,0,0,2.39630249011841,11.3981518888747,6.73472203487243,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,2.1066395619397,6.94839349209731,7.95657798307659,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0.964887042726734,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0.252470927204373,4.10160685241134,0.780877488593277,1.93881057959519,4.77937595905104,1.33679204449436,2.26461224631066,1.21443210502468,2.63030272120181,3.95287777946523,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,3.56954702987096,2.79902904647316,2.3493995546752,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0.56369293868419,0.448549638131936,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0.202725215290164,0,0,0.358053391334963,0,0,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,0,0.221985953374065,0.897138566094757,0.335769232728157,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr7:16894727..16894739,- | |short_description=p@chr7:16894727..16894739,- | ||
}} | }} |
Latest revision as of 16:14, 4 August 2015
Short description: | p@chr7:16894727..16894739, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:16894727..16894739, - |
Coexpression cluster: | MCL_coexpression_mm9:154 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 3.48e-22 | 97 |
somatic stem cell | 1.26e-18 | 91 |
multi fate stem cell | 1.26e-18 | 91 |
autonomic neuron | 1.38e-18 | 9 |
hematopoietic cell | 1.60e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.60e-12 | 32 |
hematopoietic stem cell | 1.60e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.60e-12 | 32 |
connective tissue cell | 9.50e-11 | 46 |
mesenchymal cell | 9.50e-11 | 46 |
common myeloid progenitor | 5.09e-09 | 19 |
motile cell | 1.12e-08 | 54 |
smooth muscle cell | 1.25e-08 | 3 |
vascular associated smooth muscle cell | 1.25e-08 | 3 |
aortic smooth muscle cell | 1.25e-08 | 3 |
smooth muscle myoblast | 1.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.38e-18 | 9 |
peripheral nervous system | 5.66e-15 | 11 |
connective tissue | 9.50e-11 | 46 |
vessel | 4.48e-09 | 5 |
epithelial tube open at both ends | 4.48e-09 | 5 |
blood vessel | 4.48e-09 | 5 |
vasculature | 4.48e-09 | 5 |
vascular system | 4.48e-09 | 5 |
blood vasculature | 4.48e-09 | 5 |
vascular cord | 4.48e-09 | 5 |
sympathetic nervous system | 7.16e-09 | 3 |
parasympathetic nervous system | 7.62e-09 | 3 |
smooth muscle tissue | 1.25e-08 | 3 |
blood vessel smooth muscle | 1.25e-08 | 3 |
arterial system smooth muscle | 1.25e-08 | 3 |
artery smooth muscle tissue | 1.25e-08 | 3 |
aorta smooth muscle tissue | 1.25e-08 | 3 |