FFCP PHASE1:Mm9::chr17:34282176..34282210,+: Difference between revisions
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{{FFCP|EntrezGene=15000|HGNC=|MCL_coexpression_id=18|UniProt=F7AD18|association_with_transcript=-5bp_to_ENSMUST00000171231_5end|description=CAGE_peak_1_at_H2-DMb2_5end|id=chr17:34282176..34282210,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.69e-09,6;CL:0000556,1.69e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.25e-13!48;UBERON:0002390!3.67e-11!45;UBERON:0003061!3.67e-11!45;UBERON:0004177!4.08e-08!29;UBERON:0002405!5.62e-08!70;UBERON:0000926!1.32e-07!193;UBERON:0004120!1.32e-07!193;UBERON:0006603!1.32e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.24e-21,48;UBERON:0002405,1.24e-21,48;UBERON:0002390,4.28e-18,45;UBERON:0003061,4.28e-18,45;UBERON:0004177,4.33e-12,29;UBERON:0005057,4.33e-12,29;UBERON:0003081,6.02e-10,87;UBERON:0003408,6.35e-10,24;UBERON:0002370,3.73e-09,23;UBERON:0000974,3.73e-09,23;UBERON:0004807,3.73e-09,23;UBERON:0005058,3.73e-09,23;UBERON:0003351,3.73e-09,23;UBERON:0009113,3.73e-09,23;UBERON:0003295,3.73e-09,23;UBERON:0009722,3.73e-09,23;UBERON:0005562,3.73e-09,23;UBERON:0007690,3.73e-09,23;UBERON:0000077,4.30e-09,35;UBERON:0006562,1.31e-08,24;UBERON:0001557,1.31e-08,24;UBERON:0001042,1.31e-08,24;UBERON:0008814,1.31e-08,24;UBERON:0009145,1.31e-08,24;UBERON:0001004,4.72e-08,42;UBERON:0000065,1.92e-07,41;UBERON:0000072,3.17e-07,27;UBERON:0002371,7.71e-07,16|phase1_expression=0.160148847104794,0,0,2.11724947914781,4.00716583957078,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0.262261207256992,15.9892685671518,22.8797052150503,4.89693314689703,159.781586753947,140.405180012277,135.380298923572,5.10259740906419,2.97872853602656,1.56719873483361,27.8386815660528,22.2527002635155,0,0,0.215471232685889,2.47030445293286,2.01624103807945,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,1.45653105909346,0,0,0,0,0,0,0,0,0,216.775127026595,2.17608642603403,2.35265659399725,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65155492342555,0,0,0,0,0,0,0,0,0,0,4.22480354960522,89.8514456255686,0.445326417194474,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0.251333182659351,0,1.15679485535929,7.96149496754887,0,1.10420759230197,0.484875253135222,0,0,0,2.55457055208591,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,1.12023300235348,2.61254638281195,0.758168275301024,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0.324275238183423,0.584799949701329,1.09775057645525,0.939444931322602,0,0,0.991256348951394,1.05780226665418,0,0,0,0,0,0.380451252225118,1.42358718463353,0,1.00534083520108,0.596869416123452,0.58489226135736,0,1.08069024937347,0.995706366271836,3.03468641524931,2.17072173958485,7.88954149711563,4.88763186828754,2.90928730751439,2.80543279561274,0.69560190836683,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0.538192240565737,0.482443521363367,7.20537441649758,0,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,1.2756381492599,3.93271955317771,6.56202931090403,3.47157740595628,7.53956419696361,1.08781136763742,0.983528546038072,2.48343071674259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.890328018336276,0.325773918707152,0.989820737835213,0,0,0,0,0,0.922305443831782,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.42366414172764,0.220528398054962,1.31909002353184,0,0.0603129249281559,0.358117032009409,0.164140899745061,2.04036585640896,0,36.7372393715383,0.206386867963223,0.925972636848558,6.78126445216888,17.0867784651281,27.2246026115762,0.339956859987711,0.279902904647316,0.414599921413271,2.86401185404534,0,0,0,0,0,0.269728692769641,0.330613822901344,0.523511883968059,1.16653475962614,2.4853572523477,0,0,0,0,0,0,0,0.2604087696879,0,0,0,14.5365115488962,1.62180172232131,4.93012594391171,7.40548690973432,5.01274747868948,10.7287931581883,11.538763153917,9.59981926634752,7.77441664600737,8.15412831208498,7.86444244067356,10.5254511198933,8.75527758926998,8.2982600548914,0.453460767230423,0,0,0,0.965947970160952,0.563047426353546,0.73260649706906,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p1@H2-DMb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15000 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F7AD18 | |||
|association_with_transcript=-5bp_to_ENSMUST00000171231_5end | |||
|cluster_id=chr17:34282176..34282210,+ | |||
|description=CAGE_peak_1_at_H2-DMb2_5end | |||
|id=chr17:34282176..34282210,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.69e-09,6;CL:0000556,1.69e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.25e-13!48;UBERON:0002390!3.67e-11!45;UBERON:0003061!3.67e-11!45;UBERON:0004177!4.08e-08!29;UBERON:0002405!5.62e-08!70;UBERON:0000926!1.32e-07!193;UBERON:0004120!1.32e-07!193;UBERON:0006603!1.32e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.24e-21,48;UBERON:0002405,1.24e-21,48;UBERON:0002390,4.28e-18,45;UBERON:0003061,4.28e-18,45;UBERON:0004177,4.33e-12,29;UBERON:0005057,4.33e-12,29;UBERON:0003081,6.02e-10,87;UBERON:0003408,6.35e-10,24;UBERON:0002370,3.73e-09,23;UBERON:0000974,3.73e-09,23;UBERON:0004807,3.73e-09,23;UBERON:0005058,3.73e-09,23;UBERON:0003351,3.73e-09,23;UBERON:0009113,3.73e-09,23;UBERON:0003295,3.73e-09,23;UBERON:0009722,3.73e-09,23;UBERON:0005562,3.73e-09,23;UBERON:0007690,3.73e-09,23;UBERON:0000077,4.30e-09,35;UBERON:0006562,1.31e-08,24;UBERON:0001557,1.31e-08,24;UBERON:0001042,1.31e-08,24;UBERON:0008814,1.31e-08,24;UBERON:0009145,1.31e-08,24;UBERON:0001004,4.72e-08,42;UBERON:0000065,1.92e-07,41;UBERON:0000072,3.17e-07,27;UBERON:0002371,7.71e-07,16 | |||
|phase1_expression=0.160148847104794,0,0,2.11724947914781,4.00716583957078,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0.262261207256992,15.9892685671518,22.8797052150503,4.89693314689703,159.781586753947,140.405180012277,135.380298923572,5.10259740906419,2.97872853602656,1.56719873483361,27.8386815660528,22.2527002635155,0,0,0.215471232685889,2.47030445293286,2.01624103807945,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,1.45653105909346,0,0,0,0,0,0,0,0,0,216.775127026595,2.17608642603403,2.35265659399725,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65155492342555,0,0,0,0,0,0,0,0,0,0,4.22480354960522,89.8514456255686,0.445326417194474,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0.251333182659351,0,1.15679485535929,7.96149496754887,0,1.10420759230197,0.484875253135222,0,0,0,2.55457055208591,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,1.12023300235348,2.61254638281195,0.758168275301024,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0.324275238183423,0.584799949701329,1.09775057645525,0.939444931322602,0,0,0.991256348951394,1.05780226665418,0,0,0,0,0,0.380451252225118,1.42358718463353,0,1.00534083520108,0.596869416123452,0.58489226135736,0,1.08069024937347,0.995706366271836,3.03468641524931,2.17072173958485,7.88954149711563,4.88763186828754,2.90928730751439,2.80543279561274,0.69560190836683,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0.538192240565737,0.482443521363367,7.20537441649758,0,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,1.2756381492599,3.93271955317771,6.56202931090403,3.47157740595628,7.53956419696361,1.08781136763742,0.983528546038072,2.48343071674259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.890328018336276,0.325773918707152,0.989820737835213,0,0,0,0,0,0.922305443831782,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.42366414172764,0.220528398054962,1.31909002353184,0,0.0603129249281559,0.358117032009409,0.164140899745061,2.04036585640896,0,36.7372393715383,0.206386867963223,0.925972636848558,6.78126445216888,17.0867784651281,27.2246026115762,0.339956859987711,0.279902904647316,0.414599921413271,2.86401185404534,0,0,0,0,0,0.269728692769641,0.330613822901344,0.523511883968059,1.16653475962614,2.4853572523477,0,0,0,0,0,0,0,0.2604087696879,0,0,0,14.5365115488962,1.62180172232131,4.93012594391171,7.40548690973432,5.01274747868948,10.7287931581883,11.538763153917,9.59981926634752,7.77441664600737,8.15412831208498,7.86444244067356,10.5254511198933,8.75527758926998,8.2982600548914,0.453460767230423,0,0,0,0.965947970160952,0.563047426353546,0.73260649706906,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p1@H2-DMb2 | |||
}} |
Revision as of 16:43, 4 August 2015
Short description: | p1@H2-DMb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_H2-DMb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -5bp_to_ENSMUST00000171231_5end |
EntrezGene: | 15000 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.69e-09 | 6 |
megakaryocyte | 1.69e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.24e-21 | 48 |
immune system | 1.24e-21 | 48 |
hematopoietic system | 4.28e-18 | 45 |
blood island | 4.28e-18 | 45 |
hemopoietic organ | 4.33e-12 | 29 |
immune organ | 4.33e-12 | 29 |
lateral plate mesoderm | 6.02e-10 | 87 |
gland of gut | 6.35e-10 | 24 |
thymus | 3.73e-09 | 23 |
neck | 3.73e-09 | 23 |
respiratory system epithelium | 3.73e-09 | 23 |
hemolymphoid system gland | 3.73e-09 | 23 |
pharyngeal epithelium | 3.73e-09 | 23 |
thymic region | 3.73e-09 | 23 |
pharyngeal gland | 3.73e-09 | 23 |
entire pharyngeal arch endoderm | 3.73e-09 | 23 |
thymus primordium | 3.73e-09 | 23 |
early pharyngeal endoderm | 3.73e-09 | 23 |
mixed endoderm/mesoderm-derived structure | 4.30e-09 | 35 |
pharynx | 1.31e-08 | 24 |
upper respiratory tract | 1.31e-08 | 24 |
chordate pharynx | 1.31e-08 | 24 |
pharyngeal arch system | 1.31e-08 | 24 |
pharyngeal region of foregut | 1.31e-08 | 24 |
respiratory system | 4.72e-08 | 42 |
respiratory tract | 1.92e-07 | 41 |
segment of respiratory tract | 3.17e-07 | 27 |
bone marrow | 7.71e-07 | 16 |