FFCP PHASE1:Mm9::chr2:180129127..180129153,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=299 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:180129127..180129153,+ | |||
|description=CAGE_peak_at_chr2:180129127..180129153,+ | |description=CAGE_peak_at_chr2:180129127..180129153,+ | ||
|id=chr2:180129127..180129153,+ | |id=chr2:180129127..180129153,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.94e-12!18;UBERON:0000948!1.94e-12!18;UBERON:0005498!1.94e-12!18;UBERON:0004140!1.94e-12!18;UBERON:0009881!1.94e-12!18;UBERON:0004141!1.94e-12!18;UBERON:0003084!1.94e-12!18;UBERON:0007005!1.94e-12!18;UBERON:0004139!1.94e-12!18;UBERON:0004291!1.94e-12!18;UBERON:0004535!1.58e-09!23;UBERON:0001009!1.58e-09!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.28e-20,18;UBERON:0000948,3.28e-20,18;UBERON:0005498,3.28e-20,18;UBERON:0004140,3.28e-20,18;UBERON:0009881,3.28e-20,18;UBERON:0004141,3.28e-20,18;UBERON:0003084,3.28e-20,18;UBERON:0007005,3.28e-20,18;UBERON:0004139,3.28e-20,18;UBERON:0004291,3.28e-20,18;UBERON:0004535,3.98e-15,23;UBERON:0001009,3.98e-15,23;UBERON:0004872,1.31e-09,33;UBERON:0005418,1.30e-08,5;UBERON:0002472,1.30e-08,5;UBERON:0008784,1.30e-08,5;UBERON:0006058,1.30e-08,5;UBERON:0004709,1.30e-08,5;UBERON:0002529,1.30e-08,5;UBERON:0010538,1.30e-08,5;UBERON:0005420,1.30e-08,5;UBERON:0010758,1.30e-08,5;UBERON:0000978,1.30e-08,5;UBERON:0002103,1.30e-08,5;UBERON:0000376,1.30e-08,5;UBERON:0000154,1.30e-08,5;UBERON:0010709,1.30e-08,5;UBERON:0005730,1.30e-08,5;UBERON:0003103,7.57e-08,43;UBERON:0003914,5.50e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,5.98537344805414,10.1587098491781,5.81850303762267,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,0,0,0.130120442962704,0,0,0.60281927134286,0.272145996605311,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.414251545071004,1.64168241986767,0.900310307305074,1.65721314909647,2.95146347621106,2.62254091908543,6.97601834251224,2.41446061259657,4.32031766758527,5.43047504714485,14.2825693748813,2.59420190546738,2.92399974850665,5.26920276698522,1.74468344388483,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.484393280087717,0.301564624640779,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,1.44015003128933,0,0,0,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0,0,0,1.58711268530648,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,1.77797382241292,1.44224540067226,0.64183841918363,1.51618327058278,0.25347929989024,0.943131706930381,1.49826411951812,1.21647789569252,0.976402972245426,1.90517476513229,1.50649623728312,1.15745532278223,0,1.32479028120958,2.74295401908332,1.24233064311536,0.476872379894642,0.872078499793971,0.846984423737976,1.18460451048347,1.09756783723664,2.10455769150274,1.22223702461276,1.68342681497322,1.18635018124174,1.0835493061312,0.818462086339379,1.08455788830176,0.964533054905707,0,0.701794825336225,1.50409737833809,2.86932498103265,0.661774257358546,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,5.98537344805414,10.1587098491781,5.81850303762267,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,0,0,0.130120442962704,0,0,0.60281927134286,0.272145996605311,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.414251545071004,1.64168241986767,0.900310307305074,1.65721314909647,2.95146347621106,2.62254091908543,6.97601834251224,2.41446061259657,4.32031766758527,5.43047504714485,14.2825693748813,2.59420190546738,2.92399974850665,5.26920276698522,1.74468344388483,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.484393280087717,0.301564624640779,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,1.44015003128933,0,0,0,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0,0,0,1.58711268530648,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,1.77797382241292,1.44224540067226,0.64183841918363,1.51618327058278,0.25347929989024,0.943131706930381,1.49826411951812,1.21647789569252,0.976402972245426,1.90517476513229,1.50649623728312,1.15745532278223,0,1.32479028120958,2.74295401908332,1.24233064311536,0.476872379894642,0.872078499793971,0.846984423737976,1.18460451048347,1.09756783723664,2.10455769150274,1.22223702461276,1.68342681497322,1.18635018124174,1.0835493061312,0.818462086339379,1.08455788830176,0.964533054905707,0,0.701794825336225,1.50409737833809,2.86932498103265,0.661774257358546,0.695603506861264 | ||
|short_description=p@chr2:180129127..180129153,+ | |short_description=p@chr2:180129127..180129153,+ | ||
}} | }} |
Latest revision as of 17:27, 4 August 2015
Short description: | p@chr2:180129127..180129153, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:180129127..180129153, + |
Coexpression cluster: | MCL_coexpression_mm9:299 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.28e-20 | 18 |
heart | 3.28e-20 | 18 |
primitive heart tube | 3.28e-20 | 18 |
primary heart field | 3.28e-20 | 18 |
anterior lateral plate mesoderm | 3.28e-20 | 18 |
heart tube | 3.28e-20 | 18 |
heart primordium | 3.28e-20 | 18 |
cardiac mesoderm | 3.28e-20 | 18 |
cardiogenic plate | 3.28e-20 | 18 |
heart rudiment | 3.28e-20 | 18 |
cardiovascular system | 3.98e-15 | 23 |
circulatory system | 3.98e-15 | 23 |
splanchnic layer of lateral plate mesoderm | 1.31e-09 | 33 |
hindlimb bud | 1.30e-08 | 5 |
stylopod | 1.30e-08 | 5 |
lower limb segment | 1.30e-08 | 5 |
multi-limb segment region | 1.30e-08 | 5 |
pelvic appendage | 1.30e-08 | 5 |
limb segment | 1.30e-08 | 5 |
paired limb/fin segment | 1.30e-08 | 5 |
pelvic appendage bud | 1.30e-08 | 5 |
subdivision of organism along appendicular axis | 1.30e-08 | 5 |
leg | 1.30e-08 | 5 |
hindlimb | 1.30e-08 | 5 |
hindlimb stylopod | 1.30e-08 | 5 |
posterior region of body | 1.30e-08 | 5 |
pelvic complex | 1.30e-08 | 5 |
hindlimb/pelvic fin field | 1.30e-08 | 5 |
compound organ | 7.57e-08 | 43 |
epithelial tube | 5.50e-07 | 47 |