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FFCP PHASE1:Mm9::chr14:70857254..70857351,+: Difference between revisions

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{{FFCP|EntrezGene=105653|HGNC=|MCL_coexpression_id=1|UniProt=Q8K0S0,B9EIC7|association_with_transcript=0bp_to_ENSMUST00000003561,NM_145981,uc007uoa.1_5end|description=CAGE_peak_1_at_Phyhip_5end|id=chr14:70857254..70857351,+|ontology_enrichment_celltype=CL:0000117!1.37e-07!23;CL:0000337!1.37e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-08,23;CL:0000337,2.33e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.62e-22!102;UBERON:0000924!4.62e-22!102;UBERON:0006601!4.62e-22!102;UBERON:0000033!6.65e-21!63;UBERON:0001049!7.55e-21!52;UBERON:0005068!7.55e-21!52;UBERON:0006241!7.55e-21!52;UBERON:0007135!7.55e-21!52;UBERON:0000955!2.71e-20!50;UBERON:0006238!2.71e-20!50;UBERON:0002616!1.09e-19!49;UBERON:0002346!1.25e-19!71;UBERON:0003075!1.25e-19!71;UBERON:0007284!1.25e-19!71;UBERON:0001017!7.10e-19!73;UBERON:0005743!7.10e-19!73;UBERON:0000073!1.16e-17!75;UBERON:0001016!1.16e-17!75;UBERON:0003056!4.95e-16!49;UBERON:0003080!1.48e-15!40;UBERON:0002780!6.08e-15!39;UBERON:0001890!6.08e-15!39;UBERON:0006240!6.08e-15!39;UBERON:0002020!1.26e-14!34;UBERON:0002791!2.34e-12!29;UBERON:0003528!2.34e-12!29;UBERON:0001893!2.34e-12!29;UBERON:0000153!6.17e-12!94;UBERON:0007811!1.94e-10!86;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0002619!4.89e-09!17;UBERON:0002021!4.66e-08!10;UBERON:0000411!4.66e-08!10;UBERON:0001950!4.66e-08!10;UBERON:0000468!7.42e-08!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-23,54;UBERON:0004121,9.43e-23,95;UBERON:0000924,9.43e-23,95;UBERON:0006601,9.43e-23,95;UBERON:0010371,9.87e-23,73;UBERON:0001049,8.25e-22,52;UBERON:0005068,8.25e-22,52;UBERON:0006241,8.25e-22,52;UBERON:0007135,8.25e-22,52;UBERON:0002346,8.74e-21,64;UBERON:0003075,8.74e-21,64;UBERON:0007284,8.74e-21,64;UBERON:0001017,1.55e-19,73;UBERON:0000955,4.44e-19,47;UBERON:0006238,4.44e-19,47;UBERON:0002616,2.00e-18,46;UBERON:0001016,2.79e-18,75;UBERON:0003056,5.25e-17,49;UBERON:0010314,1.98e-16,92;UBERON:0003080,2.09e-16,40;UBERON:0002020,2.76e-16,34;UBERON:0002780,1.00e-15,39;UBERON:0001890,1.00e-15,39;UBERON:0006240,1.00e-15,39;UBERON:0003528,9.95e-14,29;UBERON:0002791,9.95e-14,29;UBERON:0001893,9.95e-14,29;UBERON:0000956,3.10e-10,21;UBERON:0001869,3.10e-10,21;UBERON:0000203,3.10e-10,21;UBERON:0002619,5.48e-10,17;UBERON:0002021,6.93e-09,10;UBERON:0000411,6.93e-09,10;UBERON:0001950,6.93e-09,10|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,101.286558569924,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.405507724878058,0.367093504323363,0.782391344348039,3.48840250208714,4.39372365468944,5.05517737593137,1.67983705950435,0,0,0,0,0,0.573066879877513,0,5.86717736492834,8.46385566835253,4.43681982454325,0,0.889294796111139,0,0,0,5.69240209984969,15.3687322128622,1.45165457231869,3.37514845829227,2.94454945891935,32.2785612376298,35.5598350932098,3.67472397644862,3.73797336971122,5.51531271966013,317.133737278239,211.450231869071,218.582096823634,5.14356522147756,5.6722339033494,4.16730696445408,197.661563292978,158.136293418902,223.391038249696,31.2306300602088,30.3251680102089,13.6071595452469,0,0.226714680320357,0,0,0,0,0,0,20.926218599631,0,0,0,0.563373679106722,0,0,0,0,0,0,17.127581957859,1.03575153458869,8.16431764856536,0.693941307064543,0.913396434936424,0.922461989024234,1.20578112442098,1.29347577849275,1.50799909595611,0.494389935468748,2.89198713839823,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,775.8691120806,789.823531393539,0.255457055208591,0,0,0,280.557867605233,716.445944013969,23.2460551408799,682.955754035454,665.883050888181,263.059664412403,372.181457477436,1.32391173005411,0.497627882440372,9.35074206204597,22.0963948680798,1.95180664444056,1.14951052216736,3.42118046630164,4.06903008156431,3.40182495756639,2.0498195245576,2.24884138943349,18.8853460639481,3.88022387279116,1.89106080167819,4.04687585577082,2.6303487891309,9.73165372289593,41.4420078161378,47.5356735102349,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.787056926989615,1.54267112887378,2.09280550275367,4.02410102099429,3.85325629811659,5.9241545968853,11.984224877774,9.40398190731926,9.35679919522127,13.173006917463,10.3338942445486,745.477867659831,38.2805158050938,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0.951128130562796,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,1.13800740571849,0.685491075658373,2.25415471346161,1.4255592949172,1.16371492300575,1.54298803758701,3.60448261608267,11.3659813944294,8.79192875911699,9.00799296629144,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.739012760666419,0.37898282354097,0.325929952884052,0,0.234690248288502,0.502518772325447,1.19021820443007,0.780534591431195,0.78817572053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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:105653
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q8K0S0,uniprot:B9EIC7
|association_with_transcript=0bp_to_ENSMUST00000003561,NM_145981,uc007uoa.1_5end
|cluster_id=chr14:70857254..70857351,+
|description=CAGE_peak_1_at_Phyhip_5end
|id=chr14:70857254..70857351,+
|ontology_enrichment_celltype=CL:0000117!1.37e-07!23;CL:0000337!1.37e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-08,23;CL:0000337,2.33e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.62e-22!102;UBERON:0000924!4.62e-22!102;UBERON:0006601!4.62e-22!102;UBERON:0000033!6.65e-21!63;UBERON:0001049!7.55e-21!52;UBERON:0005068!7.55e-21!52;UBERON:0006241!7.55e-21!52;UBERON:0007135!7.55e-21!52;UBERON:0000955!2.71e-20!50;UBERON:0006238!2.71e-20!50;UBERON:0002616!1.09e-19!49;UBERON:0002346!1.25e-19!71;UBERON:0003075!1.25e-19!71;UBERON:0007284!1.25e-19!71;UBERON:0001017!7.10e-19!73;UBERON:0005743!7.10e-19!73;UBERON:0000073!1.16e-17!75;UBERON:0001016!1.16e-17!75;UBERON:0003056!4.95e-16!49;UBERON:0003080!1.48e-15!40;UBERON:0002780!6.08e-15!39;UBERON:0001890!6.08e-15!39;UBERON:0006240!6.08e-15!39;UBERON:0002020!1.26e-14!34;UBERON:0002791!2.34e-12!29;UBERON:0003528!2.34e-12!29;UBERON:0001893!2.34e-12!29;UBERON:0000153!6.17e-12!94;UBERON:0007811!1.94e-10!86;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0002619!4.89e-09!17;UBERON:0002021!4.66e-08!10;UBERON:0000411!4.66e-08!10;UBERON:0001950!4.66e-08!10;UBERON:0000468!7.42e-08!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-23,54;UBERON:0004121,9.43e-23,95;UBERON:0000924,9.43e-23,95;UBERON:0006601,9.43e-23,95;UBERON:0010371,9.87e-23,73;UBERON:0001049,8.25e-22,52;UBERON:0005068,8.25e-22,52;UBERON:0006241,8.25e-22,52;UBERON:0007135,8.25e-22,52;UBERON:0002346,8.74e-21,64;UBERON:0003075,8.74e-21,64;UBERON:0007284,8.74e-21,64;UBERON:0001017,1.55e-19,73;UBERON:0000955,4.44e-19,47;UBERON:0006238,4.44e-19,47;UBERON:0002616,2.00e-18,46;UBERON:0001016,2.79e-18,75;UBERON:0003056,5.25e-17,49;UBERON:0010314,1.98e-16,92;UBERON:0003080,2.09e-16,40;UBERON:0002020,2.76e-16,34;UBERON:0002780,1.00e-15,39;UBERON:0001890,1.00e-15,39;UBERON:0006240,1.00e-15,39;UBERON:0003528,9.95e-14,29;UBERON:0002791,9.95e-14,29;UBERON:0001893,9.95e-14,29;UBERON:0000956,3.10e-10,21;UBERON:0001869,3.10e-10,21;UBERON:0000203,3.10e-10,21;UBERON:0002619,5.48e-10,17;UBERON:0002021,6.93e-09,10;UBERON:0000411,6.93e-09,10;UBERON:0001950,6.93e-09,10
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,101.286558569924,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.405507724878058,0.367093504323363,0.782391344348039,3.48840250208714,4.39372365468944,5.05517737593137,1.67983705950435,0,0,0,0,0,0.573066879877513,0,5.86717736492834,8.46385566835253,4.43681982454325,0,0.889294796111139,0,0,0,5.69240209984969,15.3687322128622,1.45165457231869,3.37514845829227,2.94454945891935,32.2785612376298,35.5598350932098,3.67472397644862,3.73797336971122,5.51531271966013,317.133737278239,211.450231869071,218.582096823634,5.14356522147756,5.6722339033494,4.16730696445408,197.661563292978,158.136293418902,223.391038249696,31.2306300602088,30.3251680102089,13.6071595452469,0,0.226714680320357,0,0,0,0,0,0,20.926218599631,0,0,0,0.563373679106722,0,0,0,0,0,0,17.127581957859,1.03575153458869,8.16431764856536,0.693941307064543,0.913396434936424,0.922461989024234,1.20578112442098,1.29347577849275,1.50799909595611,0.494389935468748,2.89198713839823,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,775.8691120806,789.823531393539,0.255457055208591,0,0,0,280.557867605233,716.445944013969,23.2460551408799,682.955754035454,665.883050888181,263.059664412403,372.181457477436,1.32391173005411,0.497627882440372,9.35074206204597,22.0963948680798,1.95180664444056,1.14951052216736,3.42118046630164,4.06903008156431,3.40182495756639,2.0498195245576,2.24884138943349,18.8853460639481,3.88022387279116,1.89106080167819,4.04687585577082,2.6303487891309,9.73165372289593,41.4420078161378,47.5356735102349,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.787056926989615,1.54267112887378,2.09280550275367,4.02410102099429,3.85325629811659,5.9241545968853,11.984224877774,9.40398190731926,9.35679919522127,13.173006917463,10.3338942445486,745.477867659831,38.2805158050938,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0.951128130562796,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,1.13800740571849,0.685491075658373,2.25415471346161,1.4255592949172,1.16371492300575,1.54298803758701,3.60448261608267,11.3659813944294,8.79192875911699,9.00799296629144,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.739012760666419,0.37898282354097,0.325929952884052,0,0.234690248288502,0.502518772325447,1.19021820443007,0.780534591431195,0.788175720530955,0.664394068946325,0.159454768657487,2.29408640602033,0.172684981865896,0.433947175744535,0,0,2.45882136509518,6.07060841870411,185.114830255924,137.958155119023,0,0.504941854408746,0.315508219416257,0.390438744296638,1.07711698866399,0,0,0,1.21443210502468,0.584511715822624,1.18586333383957,167.408405855761,11.4971469018698,0.890328018336276,0.977321756121456,1.97964147567043,3.98235415019888,1.69946445308487,0.906970670894253,0.565815239267694,0.885905678642318,1.53717573971964,2.06742634534577,2.54473610634254,2.13898427030833,0.316036757935816,3.16255825724996,0,56.5129745551288,0.720244376125241,0.646793418913773,5.35842587578981,10.8177542521787,8.56170324489939,17.4421961838248,22.8348711835949,0,0,0.661585194164886,145.594561347327,39.0743912604091,43.9681222726256,39.7509905530444,42.3483521342258,0.291480836629851,181.160520064268,0,1.03193433981611,0.555583582109135,0,0,0,0,0,0,33.413471630529,0.474503990371703,3.45643094115643,12.6366248761507,28.4360082579677,29.478946105734,25.6242258131159,17.8531464366726,21.4639872426904,0,7.45607175704311,0,0.149516546043979,0.165458490457098,0.972255941720238,1.03327858782185,1.01373675294467,1.29092962510329,0.13020438484395,0.524296722128554,0.724752362478018,0.288030006257865,0,5.0681303822541,4.62199307241723,2.33857481360031,0.537080087002444,0.596044064343795,0.360586348559907,0,0.302899349844443,0.15241361331,0.100826185136841,0.584747284438515,0.288635524920988,0,47.8401109428096,0.221985953374065,0.0897138566094757,0,3.47741269257943,3.37828455812128,3.47988086107804,63.0243034492454,0,622.356530564007,573.565244687942,598.67581154417,737.765711801451,637.126743386697,679.099113753341,660.847027726938,763.294439465054,835.141459757889,729.524279258314,1.03787347584177,0.798049746802062,1.02440163452481,9.23805524859517,3.77303692730368,9.37601893095072,4.00044110042907,8.24140228955577,3.85103051510178,5.81203587056734,7.09742039692671,5.09291121742406,4.58843386602424,5.50616310681876,5.16919220600519,5.71552429539688,4.86714168968393,2.89363830695558,4.53294490883637,6.47675248591348,4.80016953339582,5.32427418478012,6.67621331852499,7.55801366488108,8.09340671571843,5.33072029717562,6.76833499629258,5.5244639401947,5.97538100921792,7.2948495315506,4.86403574309114,4.23569274214923,2.86461730218783,5.57772628269478,10.9956768259251,23.7320049041049,11.6965804222704,16.9748132698156,4.97349663378993,5.07360263974886,2.08681052058379
|short_description=p1@Phyhip
}}

Revision as of 18:12, 4 August 2015

Short description:p1@Phyhip
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Phyhip_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000003561, NM_145981, uc007uoa.1_5end
EntrezGene:105653
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Phyhip

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3101.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D535.56
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3317.13
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3211.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7218.58
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4197.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5158.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6223.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.33
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.13
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D78.16
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2775.87
cerebellum, neonate N30.CNhs11135.1395-42I2789.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4280.56
corpus striatum, adult.CNhs10487.19-21D8716.45
corpus striatum, neonate N00.CNhs11226.630-43F123.25
cortex, adult.CNhs10473.12-14D5682.96
cortex, neonate N30.CNhs11107.1392-42F2665.88
diencephalon, adult.CNhs10482.20-12F2263.06
diencephalon, neonate N30.CNhs11201.1388-42B2372.18
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G422.10
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A218.89
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E79.73
forelimb, embryo E17.CNhs10598.1517-43C441.44
forelimb, embryo E18.CNhs11008.1520-43B547.54
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I25.92
heart, neonate N10.CNhs11118.749-24G111.98
heart, neonate N16.CNhs11209.782-15G19.40
heart, neonate N20.CNhs11127.821-26I69.36
heart, neonate N25.CNhs11196.1351-25D313.17
heart, neonate N30.CNhs11202.1390-42D210.33
hippocampus, adult.CNhs10478.13-16E8745.48
hippocampus, neonate N00.CNhs11228.627-43G138.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D53.60
kidney, neonate N20.CNhs11113.832-19I111.37
kidney, neonate N25.CNhs11122.1353-25F38.79
kidney, neonate N30.CNhs11203.1385-42H19.01
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C2185.11
medulla oblongata, neonate N30.CNhs11200.1396-42A3137.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I9167.41
ovary, adult.CNhs10507.91-2I711.50
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G856.51
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B910.82
pituitary gland, embryo E16.CNhs11036.449-43F68.56
pituitary gland, embryo E17.CNhs11039.1265-44F517.44
pituitary gland, neonate N00.CNhs11190.1308-22E922.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C3145.59
skin, neonate N00.CNhs11124.650-25G439.07
skin, neonate N03.CNhs11215.662-22H343.97
skin, neonate N06.CNhs11097.693-20I539.75
skin, neonate N10.CNhs11108.762-6C442.35
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C9181.16
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H633.41
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D412.64
stomach, embryo E17.CNhs11006.1035-18D528.44
stomach, embryo E18.CNhs10999.1286-20C629.48
stomach, neonate N03.CNhs11193.1340-24B825.62
stomach, neonate N07.CNhs11210.718-18A917.85
stomach, neonate N25.CNhs11104.1355-25E421.46
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B447.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D563.02
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1622.36
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2573.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3598.68
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7737.77
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4637.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5679.10
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6660.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7763.29
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8835.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9729.52
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F911.00
whole body, embryo E17.CNhs10517.475-3I523.73
whole body, embryo E18.CNhs10516.493-3B311.70
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.33e-0823
neuroblast (sensu Vertebrata)2.33e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.81e-2354
ectoderm-derived structure9.43e-2395
ectoderm9.43e-2395
presumptive ectoderm9.43e-2395
ecto-epithelium9.87e-2373
neural tube8.25e-2252
neural rod8.25e-2252
future spinal cord8.25e-2252
neural keel8.25e-2252
neurectoderm8.74e-2164
neural plate8.74e-2164
presumptive neural plate8.74e-2164
central nervous system1.55e-1973
brain4.44e-1947
future brain4.44e-1947
regional part of brain2.00e-1846
nervous system2.79e-1875
pre-chordal neural plate5.25e-1749
structure with developmental contribution from neural crest1.98e-1692
anterior neural tube2.09e-1640
gray matter2.76e-1634
regional part of forebrain1.00e-1539
forebrain1.00e-1539
future forebrain1.00e-1539
brain grey matter9.95e-1429
regional part of telencephalon9.95e-1429
telencephalon9.95e-1429
cerebral cortex3.10e-1021
cerebral hemisphere3.10e-1021
pallium3.10e-1021
regional part of cerebral cortex5.48e-1017
occipital lobe6.93e-0910
visual cortex6.93e-0910
neocortex6.93e-0910
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