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FFCP PHASE1:Mm9::chr14:71290467..71290518,+: Difference between revisions

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{{FFCP|EntrezGene=14586|HGNC=|UniProt=O08842,E9PYE9|association_with_transcript=132bp_to_ENSMUST00000166891,ENSMUST00000171694_5end|description=CAGE_peak_2_at_Gfra2_5end|id=chr14:71290467..71290518,+|ontology_enrichment_celltype=CL:0000540!3.35e-07!33;CL:0000047!3.35e-07!33;CL:0000031!3.35e-07!33;CL:0000404!3.35e-07!33|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.78e-15!102;UBERON:0000924!3.78e-15!102;UBERON:0006601!3.78e-15!102;UBERON:0002346!2.06e-14!71;UBERON:0003075!2.06e-14!71;UBERON:0007284!2.06e-14!71;UBERON:0001017!4.44e-14!73;UBERON:0005743!4.44e-14!73;UBERON:0000073!8.79e-14!75;UBERON:0001016!8.79e-14!75;UBERON:0000033!1.48e-10!63;UBERON:0001049!1.78e-10!52;UBERON:0005068!1.78e-10!52;UBERON:0006241!1.78e-10!52;UBERON:0007135!1.78e-10!52;UBERON:0003056!2.07e-10!49;UBERON:0000468!1.98e-09!333;UBERON:0002020!3.52e-09!34;UBERON:0000955!1.75e-08!50;UBERON:0006238!1.75e-08!50;UBERON:0003080!3.03e-08!40;UBERON:0002616!4.99e-08!49;UBERON:0002780!8.14e-08!39;UBERON:0001890!8.14e-08!39;UBERON:0006240!8.14e-08!39;UBERON:0002048!2.29e-07!14;UBERON:0000117!2.29e-07!14;UBERON:0000171!2.29e-07!14;UBERON:0000170!2.29e-07!14;UBERON:0005597!2.29e-07!14;UBERON:0000118!2.29e-07!14;UBERON:0002021!3.17e-07!10;UBERON:0000411!3.17e-07!10;UBERON:0001950!3.17e-07!10;UBERON:0000922!5.98e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-15,73;UBERON:0001016,4.31e-15,75;UBERON:0004121,7.16e-15,95;UBERON:0000924,7.16e-15,95;UBERON:0006601,7.16e-15,95;UBERON:0002346,9.73e-15,64;UBERON:0003075,9.73e-15,64;UBERON:0007284,9.73e-15,64;UBERON:0010371,1.61e-13,73;UBERON:0000073,2.30e-12,54;UBERON:0001049,3.76e-12,52;UBERON:0005068,3.76e-12,52;UBERON:0006241,3.76e-12,52;UBERON:0007135,3.76e-12,52;UBERON:0003056,2.75e-11,49;UBERON:0002020,3.49e-10,34;UBERON:0010314,2.34e-09,92;UBERON:0000955,3.03e-09,47;UBERON:0006238,3.03e-09,47;UBERON:0003080,4.63e-09,40;UBERON:0002616,1.04e-08,46;UBERON:0002780,1.47e-08,39;UBERON:0001890,1.47e-08,39;UBERON:0006240,1.47e-08,39;UBERON:0002021,2.59e-08,10;UBERON:0000411,2.59e-08,10;UBERON:0001950,2.59e-08,10;UBERON:0002048,7.97e-08,14;UBERON:0000117,7.97e-08,14;UBERON:0000171,7.97e-08,14;UBERON:0000170,7.97e-08,14;UBERON:0005597,7.97e-08,14;UBERON:0000118,7.97e-08,14;UBERON:0003528,5.59e-07,29;UBERON:0002791,5.59e-07,29;UBERON:0001893,5.59e-07,29|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0.42438965179803,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.38486499773135,2.33166941804883,1.28482726513177,0,0,0,0,0.139986421625363,4.31257693094915,0.167782606057736,0,0,0,0,0,5.66486090406874,5.81890077199236,10.1413024560989,0,0,0,0,0,0,1.53687322128622,0.725827286159344,0.675029691658453,0.210324961351382,17.424710048632,13.0312439161452,0.244981598429908,0.287536413054709,0,1.10115880999389,1.78762273319263,3.22573719838111,4.48413378282659,5.94669683415663,9.89735404057844,2.51264699101243,3.37657566019008,3.0559649555362,12.0797720044204,12.6710795911202,5.21918448310842,0.302904773332736,1.058001841495,0,0,0,0,0,0,0.421333260395256,0,0,0,4.50698943285378,0,0,0,0,0,0,0.11418387971906,3.36619248741323,1.33597925158342,1.90833859442749,2.74018930480927,3.68984795609694,1.65794904607885,2.3517741427141,1.25666591329675,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0.484875253135222,0,1.17112318804619,1.8850203613211,0,0,0,0,4.19413790333504,2.74500361691176,1.88481528169297,6.77914848749878,5.37002460393694,3.53239675751252,2.59586020908412,1.93494791315601,0.497627882440372,0.505445516867349,0.631325567659422,3.513251959993,2.98872735763515,3.06105620669094,4.67184935290717,3.12967896096108,2.0498195245576,1.68663104207512,2.58703370739016,0,1.32374256117473,3.16712023495108,3.28793598641362,2.78047249225598,2.78601733217733,2.67516777330327,2.9855140022774,0,0,0,0.414251545071004,0.938104239924385,0.36012412292203,0.710234206755631,0,0.771335564436891,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.405344047729279,0.292399974850665,0.878200461164203,0,2.3131894342054,3.91037527041281,0,0.264450566663544,0.853153002140936,0.928946687441754,0.77320476793256,0.605050573870028,0,0.760902504450237,0,1.15289268306808,0.754005626400808,0.994782360205754,0.58489226135736,0,0.864552199498777,0.199141273254367,1.51734320762465,1.14248512609729,0,0.407302655690628,0.581857461502877,0.210407459670956,0.505892296994058,0,0.156998727841375,0,0,0.500535317148282,0.982794975566015,0.899448449539415,0.202860121388503,1.4470629585145,0.25462585178142,0.863088412352432,0.648540907100142,0.549122826376163,0,1.11642284300551,0,0,0,0.964887042726734,0.923765950833023,1.32643988239339,4.07412441105065,4.92260748748046,6.33663670378956,9.5478566741835,15.2347930167049,15.4155581807661,15.4482441224067,15.9454576547118,11.799652880654,2.13022309130459,3.9717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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:14586
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:O08842,uniprot:E9PYE9
|association_with_transcript=132bp_to_ENSMUST00000166891,ENSMUST00000171694_5end
|cluster_id=chr14:71290467..71290518,+
|description=CAGE_peak_2_at_Gfra2_5end
|id=chr14:71290467..71290518,+
|ontology_enrichment_celltype=CL:0000540!3.35e-07!33;CL:0000047!3.35e-07!33;CL:0000031!3.35e-07!33;CL:0000404!3.35e-07!33
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.78e-15!102;UBERON:0000924!3.78e-15!102;UBERON:0006601!3.78e-15!102;UBERON:0002346!2.06e-14!71;UBERON:0003075!2.06e-14!71;UBERON:0007284!2.06e-14!71;UBERON:0001017!4.44e-14!73;UBERON:0005743!4.44e-14!73;UBERON:0000073!8.79e-14!75;UBERON:0001016!8.79e-14!75;UBERON:0000033!1.48e-10!63;UBERON:0001049!1.78e-10!52;UBERON:0005068!1.78e-10!52;UBERON:0006241!1.78e-10!52;UBERON:0007135!1.78e-10!52;UBERON:0003056!2.07e-10!49;UBERON:0000468!1.98e-09!333;UBERON:0002020!3.52e-09!34;UBERON:0000955!1.75e-08!50;UBERON:0006238!1.75e-08!50;UBERON:0003080!3.03e-08!40;UBERON:0002616!4.99e-08!49;UBERON:0002780!8.14e-08!39;UBERON:0001890!8.14e-08!39;UBERON:0006240!8.14e-08!39;UBERON:0002048!2.29e-07!14;UBERON:0000117!2.29e-07!14;UBERON:0000171!2.29e-07!14;UBERON:0000170!2.29e-07!14;UBERON:0005597!2.29e-07!14;UBERON:0000118!2.29e-07!14;UBERON:0002021!3.17e-07!10;UBERON:0000411!3.17e-07!10;UBERON:0001950!3.17e-07!10;UBERON:0000922!5.98e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-15,73;UBERON:0001016,4.31e-15,75;UBERON:0004121,7.16e-15,95;UBERON:0000924,7.16e-15,95;UBERON:0006601,7.16e-15,95;UBERON:0002346,9.73e-15,64;UBERON:0003075,9.73e-15,64;UBERON:0007284,9.73e-15,64;UBERON:0010371,1.61e-13,73;UBERON:0000073,2.30e-12,54;UBERON:0001049,3.76e-12,52;UBERON:0005068,3.76e-12,52;UBERON:0006241,3.76e-12,52;UBERON:0007135,3.76e-12,52;UBERON:0003056,2.75e-11,49;UBERON:0002020,3.49e-10,34;UBERON:0010314,2.34e-09,92;UBERON:0000955,3.03e-09,47;UBERON:0006238,3.03e-09,47;UBERON:0003080,4.63e-09,40;UBERON:0002616,1.04e-08,46;UBERON:0002780,1.47e-08,39;UBERON:0001890,1.47e-08,39;UBERON:0006240,1.47e-08,39;UBERON:0002021,2.59e-08,10;UBERON:0000411,2.59e-08,10;UBERON:0001950,2.59e-08,10;UBERON:0002048,7.97e-08,14;UBERON:0000117,7.97e-08,14;UBERON:0000171,7.97e-08,14;UBERON:0000170,7.97e-08,14;UBERON:0005597,7.97e-08,14;UBERON:0000118,7.97e-08,14;UBERON:0003528,5.59e-07,29;UBERON:0002791,5.59e-07,29;UBERON:0001893,5.59e-07,29
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0.42438965179803,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.38486499773135,2.33166941804883,1.28482726513177,0,0,0,0,0.139986421625363,4.31257693094915,0.167782606057736,0,0,0,0,0,5.66486090406874,5.81890077199236,10.1413024560989,0,0,0,0,0,0,1.53687322128622,0.725827286159344,0.675029691658453,0.210324961351382,17.424710048632,13.0312439161452,0.244981598429908,0.287536413054709,0,1.10115880999389,1.78762273319263,3.22573719838111,4.48413378282659,5.94669683415663,9.89735404057844,2.51264699101243,3.37657566019008,3.0559649555362,12.0797720044204,12.6710795911202,5.21918448310842,0.302904773332736,1.058001841495,0,0,0,0,0,0,0.421333260395256,0,0,0,4.50698943285378,0,0,0,0,0,0,0.11418387971906,3.36619248741323,1.33597925158342,1.90833859442749,2.74018930480927,3.68984795609694,1.65794904607885,2.3517741427141,1.25666591329675,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0.484875253135222,0,1.17112318804619,1.8850203613211,0,0,0,0,4.19413790333504,2.74500361691176,1.88481528169297,6.77914848749878,5.37002460393694,3.53239675751252,2.59586020908412,1.93494791315601,0.497627882440372,0.505445516867349,0.631325567659422,3.513251959993,2.98872735763515,3.06105620669094,4.67184935290717,3.12967896096108,2.0498195245576,1.68663104207512,2.58703370739016,0,1.32374256117473,3.16712023495108,3.28793598641362,2.78047249225598,2.78601733217733,2.67516777330327,2.9855140022774,0,0,0,0.414251545071004,0.938104239924385,0.36012412292203,0.710234206755631,0,0.771335564436891,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.405344047729279,0.292399974850665,0.878200461164203,0,2.3131894342054,3.91037527041281,0,0.264450566663544,0.853153002140936,0.928946687441754,0.77320476793256,0.605050573870028,0,0.760902504450237,0,1.15289268306808,0.754005626400808,0.994782360205754,0.58489226135736,0,0.864552199498777,0.199141273254367,1.51734320762465,1.14248512609729,0,0.407302655690628,0.581857461502877,0.210407459670956,0.505892296994058,0,0.156998727841375,0,0,0.500535317148282,0.982794975566015,0.899448449539415,0.202860121388503,1.4470629585145,0.25462585178142,0.863088412352432,0.648540907100142,0.549122826376163,0,1.11642284300551,0,0,0,0.964887042726734,0.923765950833023,1.32643988239339,4.07412441105065,4.92260748748046,6.33663670378956,9.5478566741835,15.2347930167049,15.4155581807661,15.4482441224067,15.9454576547118,11.799652880654,2.13022309130459,3.9717545829156,2.74833211304872,0,0,0,0,2.40825884981688,2.22702204525186,0.819674726883377,0.252470927204373,0.315508219416257,2.73307121007647,3.01592756825919,1.67278158566786,3.34198011123591,2.83076530788832,0.809621403349789,0.876767573733936,1.97643888973262,5.46246237917072,0,1.78065603667255,1.14020871547503,0.989820737835213,0,1.21390318077491,0.906970670894253,0.377210159511796,2.36241514304618,1.84461088766356,1.29214146584111,0.363533729477506,1.42598951353889,0.632073515871632,0,0,0,0.540183282093931,1.81102157295856,2.7863814554107,2.48276327099183,3.0322698992352,2.96188237083818,3.95804433848979,0,0,0.661585194164886,0.16488625294148,2.26050197374268,1.20625849856312,0.716234064018819,0.492422699235184,0.582961673259701,2.78137953015765,0.512612642393558,0.619160603889667,0.925972636848558,1.13021074202815,0.820165366326151,0.915112692826091,0,0,0,0,0.949007980743406,1.42323626988794,0.972048067396211,1.88179466413022,1.09181281873089,2.15782954215713,1.32245529160537,1.83229159388821,0.90730481304255,0,0,3.88743019714345,1.82004339502807,1.75006069509643,1.6790777052105,1.01373675294467,2.46450201156083,0.781226309063701,0.314578033277133,0,0.288030006257865,0,1.21635129174099,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0,0.201932899896295,0.228620419965,0.504130925684203,0.0974578807397524,0.288635524920988,0,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0,0,0,6.7770221114048,5.9842280745933,8.59343270159095,7.04598047609119,4.7955776383945,5.2877572817279,5.40018000185445,6.30449684513909,4.07828168085784,5.69536342927002,0.830298780673413,0.798049746802062,2.56100408631201,2.91728060481953,1.04806581313991,1.2869045591501,3.33370091702423,2.26638562962784,2.88827288632634,2.77966932940177,3.29523089857312,2.82939512079114,2.62196220915671,3.07320731543373,2.23998328926892,2.38146845641537,2.0859178670074,2.50781986602817,3.70877310722976,1.76638704161277,3.08582327146874,1.59728225543404,2.62279808942053,3.48831399917588,3.57615645578256,2.62305284464197,3.47563148458268,2.89376682581627,2.8518863907631,2.24456908663095,2.01679530811096,3.05363895364247,6.13846564754534,2.63392630016142,2.12197272079256,4.99621155875892,3.97683734357194,1.93383948643468,2.10417165275728,1.10295709559758,0.927471342481686
|short_description=p2@Gfra2
}}

Revision as of 18:49, 4 August 2015

Short description:p2@Gfra2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gfra2_5end
Coexpression cluster:NA
Association with transcript: 132bp_to_ENSMUST00000166891, ENSMUST00000171694_5end
EntrezGene:14586
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gfra2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B66.34
lung, embryo E17.CNhs10605.480-44A69.55
lung, embryo E18.CNhs10583.1287-20I615.23
lung, neonate N00.CNhs11224.640-42C615.42
lung, neonate N06.CNhs11212.683-20E515.45
lung, neonate N07.CNhs11111.715-19A315.95
lung, neonate N10.CNhs11219.750-23E611.80
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.35e-1573
nervous system4.31e-1575
ectoderm-derived structure7.16e-1595
ectoderm7.16e-1595
presumptive ectoderm7.16e-1595
neurectoderm9.73e-1564
neural plate9.73e-1564
presumptive neural plate9.73e-1564
ecto-epithelium1.61e-1373
regional part of nervous system2.30e-1254
neural tube3.76e-1252
neural rod3.76e-1252
future spinal cord3.76e-1252
neural keel3.76e-1252
pre-chordal neural plate2.75e-1149
gray matter3.49e-1034
structure with developmental contribution from neural crest2.34e-0992
brain3.03e-0947
future brain3.03e-0947
anterior neural tube4.63e-0940
regional part of brain1.04e-0846
regional part of forebrain1.47e-0839
forebrain1.47e-0839
future forebrain1.47e-0839
occipital lobe2.59e-0810
visual cortex2.59e-0810
neocortex2.59e-0810
lung7.97e-0814
respiratory tube7.97e-0814
respiration organ7.97e-0814
pair of lungs7.97e-0814
lung primordium7.97e-0814
lung bud7.97e-0814
brain grey matter5.59e-0729
regional part of telencephalon5.59e-0729
telencephalon5.59e-0729
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