FFCP PHASE1:Mm9::chr10:79480412..79480432,+: Difference between revisions
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|id=chr10:79480412..79480432,+
|short_description=p@chr10:79480412..79480432,+
|description=CAGE_peak_at_chr10:79480412..79480432,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:79480412..79480432,+ | |||
|description=CAGE_peak_at_chr10:79480412..79480432,+ | |||
|id=chr10:79480412..79480432,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.83e-12!32;CL:0002032!8.83e-12!32;CL:0000037!8.83e-12!32;CL:0000566!8.83e-12!32;CL:0000837!8.83e-12!32;CL:0000838!1.26e-11!12;CL:0002031!8.73e-11!25;CL:0000084!1.38e-10!11;CL:0000827!1.38e-10!11;CL:0000542!1.89e-10!13;CL:0000051!1.89e-10!13;CL:0000791!5.56e-09!9;CL:0000789!5.56e-09!9;CL:0002420!5.56e-09!9;CL:0002419!5.56e-09!9;CL:0000790!5.56e-09!9;CL:0000738!1.15e-08!17;CL:0002087!1.15e-08!17;CL:0000624!5.55e-08!8;CL:0002320!6.49e-08!46;CL:0000134!6.49e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.12e-10,25;CL:0000838,3.35e-09,12;CL:0000791,6.45e-09,9;CL:0000789,6.45e-09,9;CL:0002420,6.45e-09,9;CL:0002419,6.45e-09,9;CL:0000790,6.45e-09,9;CL:0000542,1.92e-08,13;CL:0000051,1.92e-08,13;CL:0000738,2.79e-08,17;CL:0002087,2.79e-08,17;CL:0000988,5.93e-08,32;CL:0002032,5.93e-08,32;CL:0000037,5.93e-08,32;CL:0000837,5.93e-08,32;CL:0000084,3.10e-07,11;CL:0000827,3.10e-07,11;CL:0000624,7.80e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.20e-10,3;DOID:4045,1.20e-10,3;DOID:0050686,9.09e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.46e-25!48;UBERON:0002390!2.24e-22!45;UBERON:0003061!2.24e-22!45;UBERON:0004177!3.63e-20!29;UBERON:0002405!5.14e-17!70;UBERON:0003408!2.13e-16!24;UBERON:0002370!1.47e-15!23;UBERON:0000974!1.47e-15!23;UBERON:0004807!1.47e-15!23;UBERON:0005058!1.47e-15!23;UBERON:0003351!1.47e-15!23;UBERON:0009113!1.47e-15!23;UBERON:0003295!1.47e-15!23;UBERON:0009722!1.47e-15!23;UBERON:0005562!1.47e-15!23;UBERON:0007690!1.47e-15!23;UBERON:0006562!1.26e-14!24;UBERON:0001557!1.26e-14!24;UBERON:0001042!1.26e-14!24;UBERON:0008814!1.26e-14!24;UBERON:0009145!1.26e-14!24;UBERON:0000072!2.91e-12!27;UBERON:0005057!3.20e-11!51;UBERON:0001004!4.77e-11!42;UBERON:0003081!7.26e-11!88;UBERON:0000065!2.26e-10!41;UBERON:0000063!4.90e-08!35;UBERON:0002384!6.49e-08!46;UBERON:0001041!2.47e-07!92;UBERON:0000077!6.04e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.96e-17,23;UBERON:0000974,2.96e-17,23;UBERON:0004807,2.96e-17,23;UBERON:0005058,2.96e-17,23;UBERON:0003351,2.96e-17,23;UBERON:0009113,2.96e-17,23;UBERON:0003295,2.96e-17,23;UBERON:0009722,2.96e-17,23;UBERON:0005562,2.96e-17,23;UBERON:0007690,2.96e-17,23;UBERON:0002193,5.53e-17,48;UBERON:0002405,5.53e-17,48;UBERON:0006562,1.94e-16,24;UBERON:0003408,1.94e-16,24;UBERON:0001557,1.94e-16,24;UBERON:0001042,1.94e-16,24;UBERON:0008814,1.94e-16,24;UBERON:0009145,1.94e-16,24;UBERON:0002390,3.45e-16,45;UBERON:0003061,3.45e-16,45;UBERON:0004177,1.73e-15,29;UBERON:0005057,1.73e-15,29;UBERON:0000072,2.37e-14,27;UBERON:0000077,2.16e-12,35;UBERON:0007811,3.51e-10,36;UBERON:0000065,1.17e-08,41;UBERON:0001004,2.13e-08,42;UBERON:0000153,3.77e-08,43;UBERON:0000490,9.70e-08,66 | |||
|phase1_expression=0,0,0,0,0,0,0,3.09895976259783,0.281577444303333,0.468129052643987,0.171217968225505,0.0797721589953364,2.73921167889929,5.15780374272085,0,0.607425802169478,0,2.5236973228659,1.7824876368746,0.84877930359606,0.0850432901510698,0.695036658406197,0.522399578277871,0.639969691173627,0.45881856213434,0,0,0,0,0.252030129759931,0,0,1.23012957516914,0,0,0,0,6.69650609179052,2.3440060335714,4.18818995179039,5.29408339227913,4.78131839470912,4.36959317728038,0,0,0,0,0,0,0,0,0,2.34895648480831,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,0,0,0,0.359445373517761,0,0.508280908292259,0,0,0,0,0.255715457330331,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0,0,0,0.327726629431476,0.172684981865896,0.289298117163023,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.412773735926445,0.555583582109135,0.565105371014073,0.27338845544205,1.14389086603261,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0.202725215290164,0.205421914329655,0.77952493786677,1.07416017400489,1.19208812868759,0.961563596159751,2.51072196196781,2.62512769865184,2.97206545954499,1.91569751759997,2.82627854145282,2.88635524920988,3.97381467417334,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,3.09895976259783,0.281577444303333,0.468129052643987,0.171217968225505,0.0797721589953364,2.73921167889929,5.15780374272085,0,0.607425802169478,0,2.5236973228659,1.7824876368746,0.84877930359606,0.0850432901510698,0.695036658406197,0.522399578277871,0.639969691173627,0.45881856213434,0,0,0,0,0.252030129759931,0,0,1.23012957516914,0,0,0,0,6.69650609179052,2.3440060335714,4.18818995179039,5.29408339227913,4.78131839470912,4.36959317728038,0,0,0,0,0,0,0,0,0,2.34895648480831,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,0,0,0,0.359445373517761,0,0.508280908292259,0,0,0,0,0.255715457330331,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0,0,0,0.327726629431476,0.172684981865896,0.289298117163023,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.412773735926445,0.555583582109135,0.565105371014073,0.27338845544205,1.14389086603261,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0.202725215290164,0.205421914329655,0.77952493786677,1.07416017400489,1.19208812868759,0.961563596159751,2.51072196196781,2.62512769865184,2.97206545954499,1.91569751759997,2.82627854145282,2.88635524920988,3.97381467417334,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr10:79480412..79480432,+ | |||
}} | }} |
Latest revision as of 19:07, 4 August 2015
Short description: | p@chr10:79480412..79480432, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79480412..79480432, + |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.12e-10 | 25 |
lymphoid lineage restricted progenitor cell | 3.35e-09 | 12 |
mature alpha-beta T cell | 6.45e-09 | 9 |
alpha-beta T cell | 6.45e-09 | 9 |
immature T cell | 6.45e-09 | 9 |
mature T cell | 6.45e-09 | 9 |
immature alpha-beta T cell | 6.45e-09 | 9 |
lymphocyte | 1.92e-08 | 13 |
common lymphoid progenitor | 1.92e-08 | 13 |
leukocyte | 2.79e-08 | 17 |
nongranular leukocyte | 2.79e-08 | 17 |
hematopoietic cell | 5.93e-08 | 32 |
hematopoietic oligopotent progenitor cell | 5.93e-08 | 32 |
hematopoietic stem cell | 5.93e-08 | 32 |
hematopoietic multipotent progenitor cell | 5.93e-08 | 32 |
T cell | 3.10e-07 | 11 |
pro-T cell | 3.10e-07 | 11 |
CD4-positive, alpha-beta T cell | 7.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.96e-17 | 23 |
neck | 2.96e-17 | 23 |
respiratory system epithelium | 2.96e-17 | 23 |
hemolymphoid system gland | 2.96e-17 | 23 |
pharyngeal epithelium | 2.96e-17 | 23 |
thymic region | 2.96e-17 | 23 |
pharyngeal gland | 2.96e-17 | 23 |
entire pharyngeal arch endoderm | 2.96e-17 | 23 |
thymus primordium | 2.96e-17 | 23 |
early pharyngeal endoderm | 2.96e-17 | 23 |
hemolymphoid system | 5.53e-17 | 48 |
immune system | 5.53e-17 | 48 |
pharynx | 1.94e-16 | 24 |
gland of gut | 1.94e-16 | 24 |
upper respiratory tract | 1.94e-16 | 24 |
chordate pharynx | 1.94e-16 | 24 |
pharyngeal arch system | 1.94e-16 | 24 |
pharyngeal region of foregut | 1.94e-16 | 24 |
hematopoietic system | 3.45e-16 | 45 |
blood island | 3.45e-16 | 45 |
hemopoietic organ | 1.73e-15 | 29 |
immune organ | 1.73e-15 | 29 |
segment of respiratory tract | 2.37e-14 | 27 |
mixed endoderm/mesoderm-derived structure | 2.16e-12 | 35 |
craniocervical region | 3.51e-10 | 36 |
respiratory tract | 1.17e-08 | 41 |
respiratory system | 2.13e-08 | 42 |
anterior region of body | 3.77e-08 | 43 |
unilaminar epithelium | 9.70e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.20e-10 | 3 |
muscle cancer | 1.20e-10 | 3 |
organ system cancer | 9.09e-09 | 6 |