FFCP PHASE1:Mm9::chr1:135811366..135811375,-: Difference between revisions
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|id=chr1:135811366..135811375,-
|short_description=p@chr1:135811366..135811375,-
|description=CAGE_peak_at_chr1:135811366..135811375,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1422 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:135811366..135811375,- | |||
|description=CAGE_peak_at_chr1:135811366..135811375,- | |||
|id=chr1:135811366..135811375,- | |||
|ontology_enrichment_celltype=CL:0002453!3.34e-10!8;CL:0000128!3.19e-08!6;CL:0000126!3.19e-08!6;CL:0000127!3.19e-08!6;CL:0000333!1.07e-07!10;CL:0000095!1.07e-07!10;CL:0000243!1.07e-07!10;CL:0000123!1.07e-07!10;CL:0000125!1.07e-07!10;CL:0000030!1.07e-07!10;CL:0000339!1.07e-07!10;CL:0000222!6.73e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.05e-16,2;CL:0002604,2.05e-16,2;CL:0002453,2.58e-15,8;CL:0000333,2.58e-12,10;CL:0000095,2.58e-12,10;CL:0000243,2.58e-12,10;CL:0000123,2.58e-12,10;CL:0000125,2.58e-12,10;CL:0000030,2.58e-12,10;CL:0000339,2.58e-12,10;CL:0000128,5.76e-12,6;CL:0000126,5.76e-12,6;CL:0000127,5.76e-12,6;CL:0000680,8.78e-12,6;CL:0000187,8.78e-12,6;CL:0000056,8.78e-12,6;CL:0000192,4.61e-11,3;CL:0000359,4.61e-11,3;CL:0002539,4.61e-11,3;CL:0000514,4.61e-11,3;CL:0000222,3.49e-10,7;CL:0000355,4.85e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.72e-07!5;UBERON:0001981!2.72e-07!5;UBERON:0002049!2.72e-07!5;UBERON:0007500!2.72e-07!5;UBERON:0007798!2.72e-07!5;UBERON:0004537!2.72e-07!5;UBERON:0006965!2.72e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,3.43e-17,4;UBERON:0001637,3.43e-17,4;UBERON:0004573,3.43e-17,4;UBERON:0003509,3.43e-17,4;UBERON:0004571,3.43e-17,4;UBERON:0010191,3.43e-17,4;UBERON:0004572,3.43e-17,4;UBERON:0000055,6.94e-14,5;UBERON:0007500,6.94e-14,5;UBERON:0001981,6.94e-14,5;UBERON:0002049,6.94e-14,5;UBERON:0007798,6.94e-14,5;UBERON:0004537,6.94e-14,5;UBERON:0006965,6.94e-14,5;UBERON:0001135,4.61e-11,3;UBERON:0004237,4.61e-11,3;UBERON:0004695,4.61e-11,3;UBERON:0002111,4.61e-11,3;UBERON:0004178,4.61e-11,3;UBERON:0001134,4.85e-08,9;UBERON:0002036,4.85e-08,9;UBERON:0002385,4.85e-08,9;UBERON:0000486,4.85e-08,9;UBERON:0007503,4.85e-08,9;UBERON:0001015,4.85e-08,9;UBERON:0002329,4.85e-08,9;UBERON:0003082,4.85e-08,9;UBERON:0003059,4.85e-08,9;UBERON:0007282,4.85e-08,9;UBERON:0004290,4.85e-08,9;UBERON:0009618,4.85e-08,9;UBERON:0000383,2.75e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,4.15459499319405,3.64956952390252,0.917733760808408,0.782391344348039,0.436050312760893,4.61340983742391,8.1660557611199,0.839918529752175,1.43752564364972,0,0,0,0,1.43266719969378,0.515672092277442,0,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0.299600110518405,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0.340860645156116,1.03914401841148,0.35333957451034,0,0,2.54805239706646,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0,0.301445281105245,0,0.376999773989026,0,1.01219549843938,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0,0,0,0.238043640886014,0,0,0,0,0.655453258862952,0.345369963731791,0.867894351489069,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,4.15459499319405,3.64956952390252,0.917733760808408,0.782391344348039,0.436050312760893,4.61340983742391,8.1660557611199,0.839918529752175,1.43752564364972,0,0,0,0,1.43266719969378,0.515672092277442,0,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0.299600110518405,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0.340860645156116,1.03914401841148,0.35333957451034,0,0,2.54805239706646,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0,0.301445281105245,0,0.376999773989026,0,1.01219549843938,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0,0,0,0.238043640886014,0,0,0,0,0.655453258862952,0.345369963731791,0.867894351489069,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0.382576664137687,0,0.231867835620421 | ||
|short_description=p@chr1:135811366..135811375,- | |||
}} | }} |
Latest revision as of 19:46, 4 August 2015
Short description: | p@chr1:135811366..135811375, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811366..135811375, - |
Coexpression cluster: | MCL_coexpression_mm9:1422 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.05e-16 | 2 |
astrocyte of the hippocampus | 2.05e-16 | 2 |
oligodendrocyte precursor cell | 2.58e-15 | 8 |
migratory neural crest cell | 2.58e-12 | 10 |
neuron associated cell | 2.58e-12 | 10 |
glial cell (sensu Vertebrata) | 2.58e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 2.58e-12 | 10 |
glial cell | 2.58e-12 | 10 |
glioblast | 2.58e-12 | 10 |
glioblast (sensu Vertebrata) | 2.58e-12 | 10 |
oligodendrocyte | 5.76e-12 | 6 |
macroglial cell | 5.76e-12 | 6 |
astrocyte | 5.76e-12 | 6 |
muscle precursor cell | 8.78e-12 | 6 |
muscle cell | 8.78e-12 | 6 |
myoblast | 8.78e-12 | 6 |
smooth muscle cell | 4.61e-11 | 3 |
vascular associated smooth muscle cell | 4.61e-11 | 3 |
aortic smooth muscle cell | 4.61e-11 | 3 |
smooth muscle myoblast | 4.61e-11 | 3 |
mesodermal cell | 3.49e-10 | 7 |
multi-potent skeletal muscle stem cell | 4.85e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
aorta | 3.43e-17 | 4 |
artery | 3.43e-17 | 4 |
systemic artery | 3.43e-17 | 4 |
arterial blood vessel | 3.43e-17 | 4 |
systemic arterial system | 3.43e-17 | 4 |
aortic system | 3.43e-17 | 4 |
arterial system | 3.43e-17 | 4 |
vessel | 6.94e-14 | 5 |
epithelial tube open at both ends | 6.94e-14 | 5 |
blood vessel | 6.94e-14 | 5 |
vasculature | 6.94e-14 | 5 |
vascular system | 6.94e-14 | 5 |
blood vasculature | 6.94e-14 | 5 |
vascular cord | 6.94e-14 | 5 |
smooth muscle tissue | 4.61e-11 | 3 |
blood vessel smooth muscle | 4.61e-11 | 3 |
arterial system smooth muscle | 4.61e-11 | 3 |
artery smooth muscle tissue | 4.61e-11 | 3 |
aorta smooth muscle tissue | 4.61e-11 | 3 |
skeletal muscle tissue | 4.85e-08 | 9 |
striated muscle tissue | 4.85e-08 | 9 |
muscle tissue | 4.85e-08 | 9 |
multilaminar epithelium | 4.85e-08 | 9 |
epithelial vesicle | 4.85e-08 | 9 |
musculature | 4.85e-08 | 9 |
somite | 4.85e-08 | 9 |
myotome | 4.85e-08 | 9 |
presomitic mesoderm | 4.85e-08 | 9 |
presumptive segmental plate | 4.85e-08 | 9 |
dermomyotome | 4.85e-08 | 9 |
trunk paraxial mesoderm | 4.85e-08 | 9 |
musculature of body | 2.75e-07 | 10 |