FFCP PHASE1:Mm9::chr7:25857420..25857434,-: Difference between revisions
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{{FFCP|EntrezGene=14809|HGNC=|MCL_coexpression_id=2|UniProt=G5E822,Q80WU3,Q2TAX1|association_with_transcript=-32bp_to_ENSMUST00000003468,NM_008168,uc009frh.2,uc009fri.2_5end|description=CAGE_peak_7_at_Grik5_5end|id=chr7:25857420..25857434,-|ontology_enrichment_celltype=CL:0000117!5.82e-12!23;CL:0000337!5.82e-12!23;CL:0000221!3.44e-11!44;CL:0000133!3.44e-11!44;CL:0002319!3.89e-11!43;CL:0000540!2.44e-09!33;CL:0000047!2.44e-09!33;CL:0000031!2.44e-09!33;CL:0000404!2.44e-09!33;CL:0000055!1.67e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.89e-28,23;CL:0000337,8.89e-28,23;CL:0000540,5.58e-22,33;CL:0000047,5.58e-22,33;CL:0000031,5.58e-22,33;CL:0000404,5.58e-22,33;CL:0002319,4.12e-21,43;CL:0000221,1.71e-20,44;CL:0000133,1.71e-20,44;CL:0000393,9.10e-18,39;CL:0000211,9.10e-18,39;CL:0002321,1.17e-10,70;CL:0002609,2.88e-08,6;CL:0002613,8.57e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.79e-26!73;UBERON:0005743!3.79e-26!73;UBERON:0000073!1.02e-25!75;UBERON:0001016!1.02e-25!75;UBERON:0001049!4.59e-23!52;UBERON:0005068!4.59e-23!52;UBERON:0006241!4.59e-23!52;UBERON:0007135!4.59e-23!52;UBERON:0002346!1.35e-21!71;UBERON:0003075!1.35e-21!71;UBERON:0007284!1.35e-21!71;UBERON:0000033!7.04e-21!63;UBERON:0000955!1.26e-20!50;UBERON:0006238!1.26e-20!50;UBERON:0004121!1.74e-20!102;UBERON:0000924!1.74e-20!102;UBERON:0006601!1.74e-20!102;UBERON:0002616!7.26e-20!49;UBERON:0003056!3.72e-19!49;UBERON:0003080!8.75e-18!40;UBERON:0002780!2.45e-17!39;UBERON:0001890!2.45e-17!39;UBERON:0006240!2.45e-17!39;UBERON:0002020!5.67e-17!34;UBERON:0002791!1.13e-13!29;UBERON:0003528!1.13e-13!29;UBERON:0001893!1.13e-13!29;UBERON:0000025!2.35e-12!114;UBERON:0000153!2.66e-12!94;UBERON:0004111!3.89e-11!122;UBERON:0000956!9.04e-11!21;UBERON:0001869!9.04e-11!21;UBERON:0000203!9.04e-11!21;UBERON:0007811!1.14e-10!86;UBERON:0002619!1.52e-08!17;UBERON:0002021!9.53e-07!10;UBERON:0000411!9.53e-07!10;UBERON:0001950!9.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.26e-37,73;UBERON:0002020,5.48e-36,34;UBERON:0001016,8.88e-36,75;UBERON:0000073,3.05e-32,54;UBERON:0001049,5.94e-29,52;UBERON:0005068,5.94e-29,52;UBERON:0006241,5.94e-29,52;UBERON:0007135,5.94e-29,52;UBERON:0003528,2.59e-27,29;UBERON:0002791,2.59e-27,29;UBERON:0001893,2.59e-27,29;UBERON:0004121,2.44e-26,95;UBERON:0000924,2.44e-26,95;UBERON:0006601,2.44e-26,95;UBERON:0002346,8.15e-24,64;UBERON:0003075,8.15e-24,64;UBERON:0007284,8.15e-24,64;UBERON:0000955,9.44e-24,47;UBERON:0006238,9.44e-24,47;UBERON:0002780,5.60e-23,39;UBERON:0001890,5.60e-23,39;UBERON:0006240,5.60e-23,39;UBERON:0000956,1.54e-22,21;UBERON:0001869,1.54e-22,21;UBERON:0000203,1.54e-22,21;UBERON:0003080,2.98e-22,40;UBERON:0002616,3.67e-22,46;UBERON:0010371,6.34e-20,73;UBERON:0002619,8.35e-19,17;UBERON:0002021,3.39e-17,10;UBERON:0000411,3.39e-17,10;UBERON:0001950,3.39e-17,10;UBERON:0003056,4.64e-17,49;UBERON:0010314,3.18e-14,92;UBERON:0001948,3.54e-10,5;UBERON:0002315,3.54e-10,5;UBERON:0000025,4.61e-10,114;UBERON:0011216,5.49e-09,194;UBERON:0004111,6.45e-09,122;UBERON:0002240,2.07e-08,6;UBERON:0005174,2.07e-08,6;UBERON:0001137,2.07e-08,6;UBERON:0003076,3.97e-07,12;UBERON:0003057,3.97e-07,12|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,1.1665793944457,0.699932108126813,1.43752564364972,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0.599200221036809,1.53687322128622,1.8664130215526,3.24014251996058,1.05162480675691,1.42825492201902,1.98781686856452,1.10241719293459,2.58782771749238,0,0,2.042997409363,1.84327839907492,1.05509030184155,2.65314166446988,2.08365348222704,0.837548997004143,0.56276261003168,1.98637722109853,1.47314292736834,2.27794689278565,1.3047961207771,0.151452386666368,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0.11981512450592,0,0,0.748953197024114,0,1.25654352112864,0.695297280769106,1.79000820131231,1.24672826735736,0.973447578406546,0.305518091550949,0.124406970610093,0,0.420883711772948,0.910843100738926,0.689706313300419,0.540186389416048,0.753524089178575,0.544291993210623,0.2562274405697,0.562210347358373,0,0.431135985865684,0.567318240503458,1.23165786914764,0.219195732427575,1.66828349535359,0.696504333044333,0.411564272815887,0.59710280045548,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0.710234206755631,0.196764231747404,0.771335564436891,0.465067889500816,0.536546802799238,0.116765342367169,0.16455984991348,0.32833492815819,0,0,0,0,0.841159794256509,1.3377599609307,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0.189667900953082,0.228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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14809 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E822,uniprot:Q80WU3,uniprot:Q2TAX1 | |||
|association_with_transcript=-32bp_to_ENSMUST00000003468,NM_008168,uc009frh.2,uc009fri.2_5end | |||
|cluster_id=chr7:25857420..25857434,- | |||
|description=CAGE_peak_7_at_Grik5_5end | |||
|id=chr7:25857420..25857434,- | |||
|ontology_enrichment_celltype=CL:0000117!5.82e-12!23;CL:0000337!5.82e-12!23;CL:0000221!3.44e-11!44;CL:0000133!3.44e-11!44;CL:0002319!3.89e-11!43;CL:0000540!2.44e-09!33;CL:0000047!2.44e-09!33;CL:0000031!2.44e-09!33;CL:0000404!2.44e-09!33;CL:0000055!1.67e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.89e-28,23;CL:0000337,8.89e-28,23;CL:0000540,5.58e-22,33;CL:0000047,5.58e-22,33;CL:0000031,5.58e-22,33;CL:0000404,5.58e-22,33;CL:0002319,4.12e-21,43;CL:0000221,1.71e-20,44;CL:0000133,1.71e-20,44;CL:0000393,9.10e-18,39;CL:0000211,9.10e-18,39;CL:0002321,1.17e-10,70;CL:0002609,2.88e-08,6;CL:0002613,8.57e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.79e-26!73;UBERON:0005743!3.79e-26!73;UBERON:0000073!1.02e-25!75;UBERON:0001016!1.02e-25!75;UBERON:0001049!4.59e-23!52;UBERON:0005068!4.59e-23!52;UBERON:0006241!4.59e-23!52;UBERON:0007135!4.59e-23!52;UBERON:0002346!1.35e-21!71;UBERON:0003075!1.35e-21!71;UBERON:0007284!1.35e-21!71;UBERON:0000033!7.04e-21!63;UBERON:0000955!1.26e-20!50;UBERON:0006238!1.26e-20!50;UBERON:0004121!1.74e-20!102;UBERON:0000924!1.74e-20!102;UBERON:0006601!1.74e-20!102;UBERON:0002616!7.26e-20!49;UBERON:0003056!3.72e-19!49;UBERON:0003080!8.75e-18!40;UBERON:0002780!2.45e-17!39;UBERON:0001890!2.45e-17!39;UBERON:0006240!2.45e-17!39;UBERON:0002020!5.67e-17!34;UBERON:0002791!1.13e-13!29;UBERON:0003528!1.13e-13!29;UBERON:0001893!1.13e-13!29;UBERON:0000025!2.35e-12!114;UBERON:0000153!2.66e-12!94;UBERON:0004111!3.89e-11!122;UBERON:0000956!9.04e-11!21;UBERON:0001869!9.04e-11!21;UBERON:0000203!9.04e-11!21;UBERON:0007811!1.14e-10!86;UBERON:0002619!1.52e-08!17;UBERON:0002021!9.53e-07!10;UBERON:0000411!9.53e-07!10;UBERON:0001950!9.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.26e-37,73;UBERON:0002020,5.48e-36,34;UBERON:0001016,8.88e-36,75;UBERON:0000073,3.05e-32,54;UBERON:0001049,5.94e-29,52;UBERON:0005068,5.94e-29,52;UBERON:0006241,5.94e-29,52;UBERON:0007135,5.94e-29,52;UBERON:0003528,2.59e-27,29;UBERON:0002791,2.59e-27,29;UBERON:0001893,2.59e-27,29;UBERON:0004121,2.44e-26,95;UBERON:0000924,2.44e-26,95;UBERON:0006601,2.44e-26,95;UBERON:0002346,8.15e-24,64;UBERON:0003075,8.15e-24,64;UBERON:0007284,8.15e-24,64;UBERON:0000955,9.44e-24,47;UBERON:0006238,9.44e-24,47;UBERON:0002780,5.60e-23,39;UBERON:0001890,5.60e-23,39;UBERON:0006240,5.60e-23,39;UBERON:0000956,1.54e-22,21;UBERON:0001869,1.54e-22,21;UBERON:0000203,1.54e-22,21;UBERON:0003080,2.98e-22,40;UBERON:0002616,3.67e-22,46;UBERON:0010371,6.34e-20,73;UBERON:0002619,8.35e-19,17;UBERON:0002021,3.39e-17,10;UBERON:0000411,3.39e-17,10;UBERON:0001950,3.39e-17,10;UBERON:0003056,4.64e-17,49;UBERON:0010314,3.18e-14,92;UBERON:0001948,3.54e-10,5;UBERON:0002315,3.54e-10,5;UBERON:0000025,4.61e-10,114;UBERON:0011216,5.49e-09,194;UBERON:0004111,6.45e-09,122;UBERON:0002240,2.07e-08,6;UBERON:0005174,2.07e-08,6;UBERON:0001137,2.07e-08,6;UBERON:0003076,3.97e-07,12;UBERON:0003057,3.97e-07,12 | |||
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|short_description=p7@Grik5 | |||
}} |
Revision as of 19:59, 4 August 2015
Short description: | p7@Grik5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Grik5_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -32bp_to_ENSMUST00000003468, NM_008168, uc009frh.2, uc009fri.2_5end |
EntrezGene: | 14809 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.89e-28 | 23 |
neuroblast (sensu Vertebrata) | 8.89e-28 | 23 |
neuron | 5.58e-22 | 33 |
neuronal stem cell | 5.58e-22 | 33 |
neuroblast | 5.58e-22 | 33 |
electrically signaling cell | 5.58e-22 | 33 |
neural cell | 4.12e-21 | 43 |
ectodermal cell | 1.71e-20 | 44 |
neurectodermal cell | 1.71e-20 | 44 |
electrically responsive cell | 9.10e-18 | 39 |
electrically active cell | 9.10e-18 | 39 |
embryonic cell | 1.17e-10 | 70 |
neuron of cerebral cortex | 2.88e-08 | 6 |
striatum neuron | 8.57e-07 | 3 |