FFCP PHASE1:Mm9::chr7:25857510..25857552,-: Difference between revisions
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{{FFCP|EntrezGene=14809|HGNC=|MCL_coexpression_id=13|UniProt=G5E822,Q80WU3,Q2TAX1|association_with_transcript=-122bp_to_ENSMUST00000003468,NM_008168,uc009frh.2,uc009fri.2_5end|description=CAGE_peak_3_at_Grik5_5end|id=chr7:25857510..25857552,-|ontology_enrichment_celltype=CL:0002319!4.64e-17!43;CL:0000221!7.97e-17!44;CL:0000133!7.97e-17!44;CL:0000540!1.19e-16!33;CL:0000047!1.19e-16!33;CL:0000031!1.19e-16!33;CL:0000404!1.19e-16!33;CL:0000117!3.67e-14!23;CL:0000337!3.67e-14!23;CL:0000055!3.71e-13!50;CL:0000393!5.20e-13!39;CL:0000211!5.20e-13!39|ontology_enrichment_celltype_v019_2=CL:0002319,7.43e-25,43;CL:0000221,6.11e-24,44;CL:0000133,6.11e-24,44;CL:0000540,5.56e-23,33;CL:0000047,5.56e-23,33;CL:0000031,5.56e-23,33;CL:0000404,5.56e-23,33;CL:0000117,8.21e-20,23;CL:0000337,8.21e-20,23;CL:0000393,1.65e-17,39;CL:0000211,1.65e-17,39;CL:0002321,7.84e-10,70;CL:0002609,5.37e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.66e-36!73;UBERON:0005743!1.66e-36!73;UBERON:0000073!1.55e-34!75;UBERON:0001016!1.55e-34!75;UBERON:0004121!2.72e-28!102;UBERON:0000924!2.72e-28!102;UBERON:0006601!2.72e-28!102;UBERON:0002346!3.12e-28!71;UBERON:0003075!3.12e-28!71;UBERON:0007284!3.12e-28!71;UBERON:0001049!6.86e-28!52;UBERON:0005068!6.86e-28!52;UBERON:0006241!6.86e-28!52;UBERON:0007135!6.86e-28!52;UBERON:0000955!8.24e-27!50;UBERON:0006238!8.24e-27!50;UBERON:0002616!4.29e-26!49;UBERON:0000033!1.06e-24!63;UBERON:0003056!1.46e-21!49;UBERON:0003080!1.55e-21!40;UBERON:0002780!4.38e-21!39;UBERON:0001890!4.38e-21!39;UBERON:0006240!4.38e-21!39;UBERON:0002020!5.79e-20!34;UBERON:0002791!3.64e-17!29;UBERON:0003528!3.64e-17!29;UBERON:0001893!3.64e-17!29;UBERON:0000956!9.13e-13!21;UBERON:0001869!9.13e-13!21;UBERON:0000203!9.13e-13!21;UBERON:0000025!1.35e-11!114;UBERON:0000153!4.29e-11!94;UBERON:0007811!3.17e-10!86;UBERON:0002619!3.48e-10!17;UBERON:0004111!3.57e-10!122;UBERON:0003076!7.81e-07!12;UBERON:0003057!7.81e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.92e-51,73;UBERON:0001016,3.52e-49,75;UBERON:0000073,2.25e-40,54;UBERON:0004121,1.26e-39,95;UBERON:0000924,1.26e-39,95;UBERON:0006601,1.26e-39,95;UBERON:0001049,1.63e-38,52;UBERON:0005068,1.63e-38,52;UBERON:0006241,1.63e-38,52;UBERON:0007135,1.63e-38,52;UBERON:0002346,4.11e-38,64;UBERON:0003075,4.11e-38,64;UBERON:0007284,4.11e-38,64;UBERON:0000955,1.84e-34,47;UBERON:0006238,1.84e-34,47;UBERON:0002616,1.92e-33,46;UBERON:0010371,1.12e-31,73;UBERON:0003080,2.60e-29,40;UBERON:0002780,1.18e-28,39;UBERON:0001890,1.18e-28,39;UBERON:0006240,1.18e-28,39;UBERON:0002020,3.10e-28,34;UBERON:0003056,1.10e-27,49;UBERON:0010314,8.78e-27,92;UBERON:0003528,3.60e-24,29;UBERON:0002791,3.60e-24,29;UBERON:0001893,3.60e-24,29;UBERON:0000956,8.70e-18,21;UBERON:0001869,8.70e-18,21;UBERON:0000203,8.70e-18,21;UBERON:0002619,4.77e-14,17;UBERON:0000025,6.60e-13,114;UBERON:0004111,2.64e-11,122;UBERON:0003076,3.31e-09,12;UBERON:0003057,3.31e-09,12;UBERON:0002021,2.38e-08,10;UBERON:0000411,2.38e-08,10;UBERON:0001950,2.38e-08,10;UBERON:0002420,1.77e-07,8;UBERON:0007245,1.77e-07,8;UBERON:0010009,1.77e-07,8;UBERON:0010011,1.77e-07,8;UBERON:0000454,1.77e-07,8;UBERON:0001954,3.71e-07,7;UBERON:0003022,3.71e-07,7;UBERON:0002421,3.71e-07,7;UBERON:0000349,3.71e-07,7;UBERON:0002600,3.71e-07,7;UBERON:0011216,6.67e-07,194|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.550640256485045,2.34717403304412,3.05235218932625,3.07560655828261,1.74986909166855,1.25987779462826,0,0,0,0,0.257259436035947,0,0,4.24864567805155,3.70293685490423,5.07065122804943,0.677689064138264,0,0,0,0,2.69640099466564,3.07374644257244,4.45865332926454,4.86021377994086,3.15487442027073,4.85606673486466,2.20868540951614,3.55223317723367,3.73797336971122,5.51531271966013,2.20231761998777,2.80912143787413,2.76491759861238,4.2203612073662,4.7573574673253,2.6045668527838,1.67509799400829,2.25105044012672,2.13917546887534,2.65165726926301,2.27794689278565,2.98239113320481,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.890652834388949,0.867426633830679,0.304465478312141,1.15307748628029,0.904335843315735,0.705532242814229,0.502666365318702,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,1.75668478206928,3.56059401582874,0.255457055208591,0.11981512450592,0,0.254140454146129,2.09706895166752,4.57500602818627,4.77486538028885,4.34560800480691,5.11430914660661,2.90903262383384,2.59586020908412,0.81471491080253,0.248813941220186,0.252722758433675,0.631325567659422,1.82168620147785,0,1.62055916824814,0.753524089178575,1.63287597963187,0.896796041993948,2.15513966487376,1.03481348295606,1.29340795759705,2.45837904218165,1.58356011747554,1.31517439456545,1.94633074457919,0,0.205782136407943,1.39323986772945,0,0,0,1.44988040774851,2.34526059981096,0.900310307305074,1.42046841351126,1.77087808572663,1.85120535464854,0.697601834251224,0,0.350296027101508,0.822799249567402,0.32833492815819,0.486412857275134,0.146199987425332,0.439100230582101,0.671032093801859,4.83666881697493,2.88132914661996,0,0,1.70630600428187,0.928946687441754,0.77320476793256,0.605050573870028,1.11189021922435,0,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,1.13800740571849,1.14248512609729,0,1.01825663922657,0,1.26244475802573,0.948548056863859,0.442830443938806,0.941992367048249,0.616985819609003,0,0.333690211432188,0,0,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.814824882210129,1.01847051465113,0.469380496577004,1.50755631697634,0.476087281772027,0.780534591431195,0.315270288212382,0.664394068946325,0.797273843287435,0.983179888294428,0.172684981865896,0.433947175744535,0,0,0,0,2.0871576698413,1.28932855251423,0,0.252470927204373,1.26203287766503,1.56175497718655,1.07711698866399,2.15071918157297,2.22798674082394,3.39691836946599,0.404810701674894,2.63030272120181,1.97643888973262,3.85585579706168,0.567760340833074,1.6025904330053,0.651547837414304,1.15479086080775,0,0.971122544619926,1.209294227859,0,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0.712994756769443,0.948110273807448,0,0,2.7235168460303,1.44048875225048,1.81102157295856,2.35770738534752,1.77340233642274,1.78368817602071,0.987294123612726,1.8267896946876,0,0,0.220528398054962,0,0.645857706783622,0.241251699712623,0.596861720015682,0.328281799490123,0.291480836629851,2.03967832211561,0,0,0.740778109478847,0.188368457004691,0,0.228778173206523,0.849892149969277,0.559805809294632,1.38199973804424,0.954670618015114,0.790839983952838,0.203319467126849,0.324016022465404,0.836353184057875,0.87345025498471,0.404593039154462,1.23980183588004,0.26175594198403,0.388844919875379,0,1.12738587736838,1.34564891439581,0.165458490457098,0.972255941720238,1.29159823477731,1.520605129417,1.64300134104056,0.781226309063701,0.524296722128554,0.966336483304024,0,0,0.202725215290164,0.616265742988964,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.772758376128762,0,0.36630324853453,0.214368379079066,0,3.3885110557024,1.84130094602871,5.72895513439397,10.4830441229649,3.42541259885321,2.2661816921691,2.02506750069542,1.80128481289688,1.35942722695261,3.10656187051092,1.24544817101012,0.798049746802062,1.02440163452481,1.45864030240976,0.838452650511929,0.919217542250071,0.44449345560323,0.824140228955577,0.64183841918363,0.505394423527595,1.01391719956096,1.32038438970253,1.12369808963859,1.02440243847791,0.976402972245426,1.42888107384922,0.463537303779422,0.38581844092741,0,0.735994600671987,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.846984423737976,0.25384382367503,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.711810108745045,1.18205378850676,0,0.77468420592983,0.964533054905707,0.249810577937946,0.935726433781634,0.644613162144895,0.956441660344217,0.220591419119515,0.695603506861264|short_description=p3@Grik5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14809 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E822,uniprot:Q80WU3,uniprot:Q2TAX1 | |||
|association_with_transcript=-122bp_to_ENSMUST00000003468,NM_008168,uc009frh.2,uc009fri.2_5end | |||
|cluster_id=chr7:25857510..25857552,- | |||
|description=CAGE_peak_3_at_Grik5_5end | |||
|id=chr7:25857510..25857552,- | |||
|ontology_enrichment_celltype=CL:0002319!4.64e-17!43;CL:0000221!7.97e-17!44;CL:0000133!7.97e-17!44;CL:0000540!1.19e-16!33;CL:0000047!1.19e-16!33;CL:0000031!1.19e-16!33;CL:0000404!1.19e-16!33;CL:0000117!3.67e-14!23;CL:0000337!3.67e-14!23;CL:0000055!3.71e-13!50;CL:0000393!5.20e-13!39;CL:0000211!5.20e-13!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.43e-25,43;CL:0000221,6.11e-24,44;CL:0000133,6.11e-24,44;CL:0000540,5.56e-23,33;CL:0000047,5.56e-23,33;CL:0000031,5.56e-23,33;CL:0000404,5.56e-23,33;CL:0000117,8.21e-20,23;CL:0000337,8.21e-20,23;CL:0000393,1.65e-17,39;CL:0000211,1.65e-17,39;CL:0002321,7.84e-10,70;CL:0002609,5.37e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.66e-36!73;UBERON:0005743!1.66e-36!73;UBERON:0000073!1.55e-34!75;UBERON:0001016!1.55e-34!75;UBERON:0004121!2.72e-28!102;UBERON:0000924!2.72e-28!102;UBERON:0006601!2.72e-28!102;UBERON:0002346!3.12e-28!71;UBERON:0003075!3.12e-28!71;UBERON:0007284!3.12e-28!71;UBERON:0001049!6.86e-28!52;UBERON:0005068!6.86e-28!52;UBERON:0006241!6.86e-28!52;UBERON:0007135!6.86e-28!52;UBERON:0000955!8.24e-27!50;UBERON:0006238!8.24e-27!50;UBERON:0002616!4.29e-26!49;UBERON:0000033!1.06e-24!63;UBERON:0003056!1.46e-21!49;UBERON:0003080!1.55e-21!40;UBERON:0002780!4.38e-21!39;UBERON:0001890!4.38e-21!39;UBERON:0006240!4.38e-21!39;UBERON:0002020!5.79e-20!34;UBERON:0002791!3.64e-17!29;UBERON:0003528!3.64e-17!29;UBERON:0001893!3.64e-17!29;UBERON:0000956!9.13e-13!21;UBERON:0001869!9.13e-13!21;UBERON:0000203!9.13e-13!21;UBERON:0000025!1.35e-11!114;UBERON:0000153!4.29e-11!94;UBERON:0007811!3.17e-10!86;UBERON:0002619!3.48e-10!17;UBERON:0004111!3.57e-10!122;UBERON:0003076!7.81e-07!12;UBERON:0003057!7.81e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.92e-51,73;UBERON:0001016,3.52e-49,75;UBERON:0000073,2.25e-40,54;UBERON:0004121,1.26e-39,95;UBERON:0000924,1.26e-39,95;UBERON:0006601,1.26e-39,95;UBERON:0001049,1.63e-38,52;UBERON:0005068,1.63e-38,52;UBERON:0006241,1.63e-38,52;UBERON:0007135,1.63e-38,52;UBERON:0002346,4.11e-38,64;UBERON:0003075,4.11e-38,64;UBERON:0007284,4.11e-38,64;UBERON:0000955,1.84e-34,47;UBERON:0006238,1.84e-34,47;UBERON:0002616,1.92e-33,46;UBERON:0010371,1.12e-31,73;UBERON:0003080,2.60e-29,40;UBERON:0002780,1.18e-28,39;UBERON:0001890,1.18e-28,39;UBERON:0006240,1.18e-28,39;UBERON:0002020,3.10e-28,34;UBERON:0003056,1.10e-27,49;UBERON:0010314,8.78e-27,92;UBERON:0003528,3.60e-24,29;UBERON:0002791,3.60e-24,29;UBERON:0001893,3.60e-24,29;UBERON:0000956,8.70e-18,21;UBERON:0001869,8.70e-18,21;UBERON:0000203,8.70e-18,21;UBERON:0002619,4.77e-14,17;UBERON:0000025,6.60e-13,114;UBERON:0004111,2.64e-11,122;UBERON:0003076,3.31e-09,12;UBERON:0003057,3.31e-09,12;UBERON:0002021,2.38e-08,10;UBERON:0000411,2.38e-08,10;UBERON:0001950,2.38e-08,10;UBERON:0002420,1.77e-07,8;UBERON:0007245,1.77e-07,8;UBERON:0010009,1.77e-07,8;UBERON:0010011,1.77e-07,8;UBERON:0000454,1.77e-07,8;UBERON:0001954,3.71e-07,7;UBERON:0003022,3.71e-07,7;UBERON:0002421,3.71e-07,7;UBERON:0000349,3.71e-07,7;UBERON:0002600,3.71e-07,7;UBERON:0011216,6.67e-07,194 | |||
|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.550640256485045,2.34717403304412,3.05235218932625,3.07560655828261,1.74986909166855,1.25987779462826,0,0,0,0,0.257259436035947,0,0,4.24864567805155,3.70293685490423,5.07065122804943,0.677689064138264,0,0,0,0,2.69640099466564,3.07374644257244,4.45865332926454,4.86021377994086,3.15487442027073,4.85606673486466,2.20868540951614,3.55223317723367,3.73797336971122,5.51531271966013,2.20231761998777,2.80912143787413,2.76491759861238,4.2203612073662,4.7573574673253,2.6045668527838,1.67509799400829,2.25105044012672,2.13917546887534,2.65165726926301,2.27794689278565,2.98239113320481,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.890652834388949,0.867426633830679,0.304465478312141,1.15307748628029,0.904335843315735,0.705532242814229,0.502666365318702,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,1.75668478206928,3.56059401582874,0.255457055208591,0.11981512450592,0,0.254140454146129,2.09706895166752,4.57500602818627,4.77486538028885,4.34560800480691,5.11430914660661,2.90903262383384,2.59586020908412,0.81471491080253,0.248813941220186,0.252722758433675,0.631325567659422,1.82168620147785,0,1.62055916824814,0.753524089178575,1.63287597963187,0.896796041993948,2.15513966487376,1.03481348295606,1.29340795759705,2.45837904218165,1.58356011747554,1.31517439456545,1.94633074457919,0,0.205782136407943,1.39323986772945,0,0,0,1.44988040774851,2.34526059981096,0.900310307305074,1.42046841351126,1.77087808572663,1.85120535464854,0.697601834251224,0,0.350296027101508,0.822799249567402,0.32833492815819,0.486412857275134,0.146199987425332,0.439100230582101,0.671032093801859,4.83666881697493,2.88132914661996,0,0,1.70630600428187,0.928946687441754,0.77320476793256,0.605050573870028,1.11189021922435,0,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,1.13800740571849,1.14248512609729,0,1.01825663922657,0,1.26244475802573,0.948548056863859,0.442830443938806,0.941992367048249,0.616985819609003,0,0.333690211432188,0,0,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.814824882210129,1.01847051465113,0.469380496577004,1.50755631697634,0.476087281772027,0.780534591431195,0.315270288212382,0.664394068946325,0.797273843287435,0.983179888294428,0.172684981865896,0.433947175744535,0,0,0,0,2.0871576698413,1.28932855251423,0,0.252470927204373,1.26203287766503,1.56175497718655,1.07711698866399,2.15071918157297,2.22798674082394,3.39691836946599,0.404810701674894,2.63030272120181,1.97643888973262,3.85585579706168,0.567760340833074,1.6025904330053,0.651547837414304,1.15479086080775,0,0.971122544619926,1.209294227859,0,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0.712994756769443,0.948110273807448,0,0,2.7235168460303,1.44048875225048,1.81102157295856,2.35770738534752,1.77340233642274,1.78368817602071,0.987294123612726,1.8267896946876,0,0,0.220528398054962,0,0.645857706783622,0.241251699712623,0.596861720015682,0.328281799490123,0.291480836629851,2.03967832211561,0,0,0.740778109478847,0.188368457004691,0,0.228778173206523,0.849892149969277,0.559805809294632,1.38199973804424,0.954670618015114,0.790839983952838,0.203319467126849,0.324016022465404,0.836353184057875,0.87345025498471,0.404593039154462,1.23980183588004,0.26175594198403,0.388844919875379,0,1.12738587736838,1.34564891439581,0.165458490457098,0.972255941720238,1.29159823477731,1.520605129417,1.64300134104056,0.781226309063701,0.524296722128554,0.966336483304024,0,0,0.202725215290164,0.616265742988964,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.772758376128762,0,0.36630324853453,0.214368379079066,0,3.3885110557024,1.84130094602871,5.72895513439397,10.4830441229649,3.42541259885321,2.2661816921691,2.02506750069542,1.80128481289688,1.35942722695261,3.10656187051092,1.24544817101012,0.798049746802062,1.02440163452481,1.45864030240976,0.838452650511929,0.919217542250071,0.44449345560323,0.824140228955577,0.64183841918363,0.505394423527595,1.01391719956096,1.32038438970253,1.12369808963859,1.02440243847791,0.976402972245426,1.42888107384922,0.463537303779422,0.38581844092741,0,0.735994600671987,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.846984423737976,0.25384382367503,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.711810108745045,1.18205378850676,0,0.77468420592983,0.964533054905707,0.249810577937946,0.935726433781634,0.644613162144895,0.956441660344217,0.220591419119515,0.695603506861264 | |||
|short_description=p3@Grik5 | |||
}} |
Revision as of 19:59, 4 August 2015
Short description: | p3@Grik5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Grik5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -122bp_to_ENSMUST00000003468, NM_008168, uc009frh.2, uc009fri.2_5end |
EntrezGene: | 14809 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.43e-25 | 43 |
ectodermal cell | 6.11e-24 | 44 |
neurectodermal cell | 6.11e-24 | 44 |
neuron | 5.56e-23 | 33 |
neuronal stem cell | 5.56e-23 | 33 |
neuroblast | 5.56e-23 | 33 |
electrically signaling cell | 5.56e-23 | 33 |
CNS neuron (sensu Vertebrata) | 8.21e-20 | 23 |
neuroblast (sensu Vertebrata) | 8.21e-20 | 23 |
electrically responsive cell | 1.65e-17 | 39 |
electrically active cell | 1.65e-17 | 39 |
embryonic cell | 7.84e-10 | 70 |
neuron of cerebral cortex | 5.37e-07 | 6 |