FFCP PHASE1:Mm9::chr5:99703670..99703683,+: Difference between revisions
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|id=chr5:99703670..99703683,+
|short_description=p@chr5:99703670..99703683,+
|description=CAGE_peak_at_chr5:99703670..99703683,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:99703670..99703683,+ | |||
|description=CAGE_peak_at_chr5:99703670..99703683,+ | |||
|id=chr5:99703670..99703683,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.60e-38!23;CL:0000337!1.60e-38!23;CL:0000540!8.46e-26!33;CL:0000047!8.46e-26!33;CL:0000031!8.46e-26!33;CL:0000404!8.46e-26!33;CL:0000393!2.71e-21!39;CL:0000211!2.71e-21!39;CL:0002609!3.32e-21!6;CL:0002319!5.50e-19!43;CL:0000221!1.78e-18!44;CL:0000133!1.78e-18!44;CL:0000055!7.75e-16!50;CL:0002608!2.44e-11!3;CL:0000120!1.39e-10!3;CL:0002321!2.60e-10!70;CL:0000220!2.60e-10!70;CL:0002613!6.01e-10!3;CL:0000034!1.92e-07!97;CL:0000723!3.93e-07!91;CL:0000048!3.93e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.01e-74,6;CL:0002608,8.86e-38,3;CL:0000117,1.06e-26,23;CL:0000337,1.06e-26,23;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0000393,7.07e-16,39;CL:0000211,7.07e-16,39;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002321,6.38e-09,70;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!7.55e-20!29;UBERON:0003528!7.55e-20!29;UBERON:0001893!7.55e-20!29;UBERON:0002020!4.54e-19!34;UBERON:0003056!4.10e-16!49;UBERON:0000033!4.86e-15!63;UBERON:0001017!3.61e-14!73;UBERON:0005743!3.61e-14!73;UBERON:0002616!4.65e-14!49;UBERON:0002780!5.02e-14!39;UBERON:0001890!5.02e-14!39;UBERON:0006240!5.02e-14!39;UBERON:0002420!7.61e-14!8;UBERON:0007245!7.61e-14!8;UBERON:0010009!7.61e-14!8;UBERON:0010011!7.61e-14!8;UBERON:0000454!7.61e-14!8;UBERON:0000955!1.03e-13!50;UBERON:0006238!1.03e-13!50;UBERON:0000073!1.10e-13!75;UBERON:0001016!1.10e-13!75;UBERON:0003080!1.33e-13!40;UBERON:0004121!1.05e-12!102;UBERON:0000924!1.05e-12!102;UBERON:0006601!1.05e-12!102;UBERON:0002346!1.87e-11!71;UBERON:0003075!1.87e-11!71;UBERON:0007284!1.87e-11!71;UBERON:0001049!2.11e-11!52;UBERON:0005068!2.11e-11!52;UBERON:0006241!2.11e-11!52;UBERON:0007135!2.11e-11!52;UBERON:0000369!2.74e-10!5;UBERON:0002435!2.74e-10!5;UBERON:0000204!2.74e-10!5;UBERON:0010082!2.74e-10!5;UBERON:0007811!5.53e-10!86;UBERON:0000956!2.16e-09!21;UBERON:0001869!2.16e-09!21;UBERON:0000203!2.16e-09!21;UBERON:0000153!8.34e-09!94;UBERON:0001954!6.18e-08!7;UBERON:0003022!6.18e-08!7;UBERON:0002421!6.18e-08!7;UBERON:0000349!6.18e-08!7;UBERON:0002600!6.18e-08!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.07e-21,21;UBERON:0001869,1.07e-21,21;UBERON:0000203,1.07e-21,21;UBERON:0003528,2.99e-21,29;UBERON:0002791,2.99e-21,29;UBERON:0001893,2.99e-21,29;UBERON:0002020,3.59e-18,34;UBERON:0001954,1.08e-16,7;UBERON:0003022,1.08e-16,7;UBERON:0002421,1.08e-16,7;UBERON:0000349,1.08e-16,7;UBERON:0002600,1.08e-16,7;UBERON:0002780,7.07e-16,39;UBERON:0001890,7.07e-16,39;UBERON:0006240,7.07e-16,39;UBERON:0003080,1.74e-15,40;UBERON:0002616,1.70e-13,46;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0003056,1.11e-12,49;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0000073,1.59e-11,54;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002619,2.79e-07,17;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,3.94020526772215,4.72520784160917,3.57552434297349,0,0,2.44981598429908,2.1086003624012,4.5960939330501,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,1.04182674111352,0.558365998002762,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0,0,0,0,0.130120442962704,0.689706313300419,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,3.94020526772215,4.72520784160917,3.57552434297349,0,0,2.44981598429908,2.1086003624012,4.5960939330501,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,1.04182674111352,0.558365998002762,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0,0,0,0,0.130120442962704,0.689706313300419,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:99703670..99703683,+ | |||
}} | }} |
Latest revision as of 20:38, 4 August 2015
Short description: | p@chr5:99703670..99703683, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:99703670..99703683, + |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.01e-74 | 6 |
hippocampal neuron | 8.86e-38 | 3 |
CNS neuron (sensu Vertebrata) | 1.06e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-26 | 23 |
neuron | 1.03e-18 | 33 |
neuronal stem cell | 1.03e-18 | 33 |
neuroblast | 1.03e-18 | 33 |
electrically signaling cell | 1.03e-18 | 33 |
electrically responsive cell | 7.07e-16 | 39 |
electrically active cell | 7.07e-16 | 39 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
embryonic cell | 6.38e-09 | 70 |
somatic stem cell | 7.08e-07 | 91 |
multi fate stem cell | 7.08e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.07e-21 | 21 |
cerebral hemisphere | 1.07e-21 | 21 |
pallium | 1.07e-21 | 21 |
brain grey matter | 2.99e-21 | 29 |
regional part of telencephalon | 2.99e-21 | 29 |
telencephalon | 2.99e-21 | 29 |
gray matter | 3.59e-18 | 34 |
Ammon's horn | 1.08e-16 | 7 |
lobe parts of cerebral cortex | 1.08e-16 | 7 |
hippocampal formation | 1.08e-16 | 7 |
limbic system | 1.08e-16 | 7 |
limbic lobe | 1.08e-16 | 7 |
regional part of forebrain | 7.07e-16 | 39 |
forebrain | 7.07e-16 | 39 |
future forebrain | 7.07e-16 | 39 |
anterior neural tube | 1.74e-15 | 40 |
regional part of brain | 1.70e-13 | 46 |
brain | 3.25e-13 | 47 |
future brain | 3.25e-13 | 47 |
pre-chordal neural plate | 1.11e-12 | 49 |
neural tube | 5.81e-12 | 52 |
neural rod | 5.81e-12 | 52 |
future spinal cord | 5.81e-12 | 52 |
neural keel | 5.81e-12 | 52 |
regional part of nervous system | 1.59e-11 | 54 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
ecto-epithelium | 1.47e-08 | 73 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
regional part of cerebral cortex | 2.79e-07 | 17 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |