FFCP PHASE1:Mm9::chr12:28026549..28026562,-: Difference between revisions
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|id=chr12:28026549..28026562,-
|short_description=p@chr12:28026549..28026562,-
|description=CAGE_peak_at_chr12:28026549..28026562,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:28026549..28026562,- | |||
|description=CAGE_peak_at_chr12:28026549..28026562,- | |||
|id=chr12:28026549..28026562,- | |||
|ontology_enrichment_celltype=CL:0000540!2.27e-14!33;CL:0000047!2.27e-14!33;CL:0000031!2.27e-14!33;CL:0000404!2.27e-14!33;CL:0000117!1.43e-11!23;CL:0000337!1.43e-11!23;CL:0002319!5.02e-11!43;CL:0000393!6.17e-11!39;CL:0000211!6.17e-11!39;CL:0000221!1.37e-10!44;CL:0000133!1.37e-10!44;CL:0002609!1.22e-08!6;CL:0000055!2.28e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.77e-48,6;CL:0002608,1.13e-24,3;CL:0000117,5.48e-22,23;CL:0000337,5.48e-22,23;CL:0000540,3.38e-15,33;CL:0000047,3.38e-15,33;CL:0000031,3.38e-15,33;CL:0000404,3.38e-15,33;CL:0000393,8.74e-13,39;CL:0000211,8.74e-13,39;CL:0002319,1.51e-11,43;CL:0000221,2.84e-11,44;CL:0000133,2.84e-11,44;CL:0002321,7.27e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.97e-15!73;UBERON:0005743!4.97e-15!73;UBERON:0000073!2.79e-14!75;UBERON:0001016!2.79e-14!75;UBERON:0003056!1.25e-12!49;UBERON:0002780!1.57e-12!39;UBERON:0001890!1.57e-12!39;UBERON:0006240!1.57e-12!39;UBERON:0004121!3.19e-12!102;UBERON:0000924!3.19e-12!102;UBERON:0006601!3.19e-12!102;UBERON:0003080!5.22e-12!40;UBERON:0002346!1.77e-11!71;UBERON:0003075!1.77e-11!71;UBERON:0007284!1.77e-11!71;UBERON:0002020!1.87e-11!34;UBERON:0002791!6.01e-11!29;UBERON:0003528!6.01e-11!29;UBERON:0001893!6.01e-11!29;UBERON:0001049!1.15e-10!52;UBERON:0005068!1.15e-10!52;UBERON:0006241!1.15e-10!52;UBERON:0007135!1.15e-10!52;UBERON:0002616!2.52e-10!49;UBERON:0000033!3.14e-10!63;UBERON:0000955!6.02e-10!50;UBERON:0006238!6.02e-10!50;UBERON:0000956!5.33e-09!21;UBERON:0001869!5.33e-09!21;UBERON:0000203!5.33e-09!21;UBERON:0000153!5.47e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.34e-18,21;UBERON:0001869,1.34e-18,21;UBERON:0000203,1.34e-18,21;UBERON:0003528,2.19e-13,29;UBERON:0002791,2.19e-13,29;UBERON:0001893,2.19e-13,29;UBERON:0002020,2.30e-11,34;UBERON:0001954,5.82e-11,7;UBERON:0003022,5.82e-11,7;UBERON:0002421,5.82e-11,7;UBERON:0000349,5.82e-11,7;UBERON:0002600,5.82e-11,7;UBERON:0002780,7.39e-10,39;UBERON:0001890,7.39e-10,39;UBERON:0006240,7.39e-10,39;UBERON:0003080,1.33e-09,40;UBERON:0000073,4.78e-09,54;UBERON:0001017,2.49e-08,73;UBERON:0002616,2.71e-08,46;UBERON:0000955,4.16e-08,47;UBERON:0006238,4.16e-08,47;UBERON:0001016,4.35e-08,75;UBERON:0002619,7.43e-08,17;UBERON:0003056,9.29e-08,49;UBERON:0001049,2.77e-07,52;UBERON:0005068,2.77e-07,52;UBERON:0006241,2.77e-07,52;UBERON:0007135,2.77e-07,52 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,2.17748185847803,4.86021377994086,4.41682418837902,0.285650984403804,0,1.34739879136449,2.58782771749238,1.83843757322004,1.10115880999389,0,0,0.923204014111357,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0,0,0.260240885925407,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0.646703978798527,1.32374256117473,1.23165786914764,0.657587197282725,0.834141747676794,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517434735131018,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,1.37016503954128,0.755393897389701,0,0.45032120322422,0,0,0.31136204275253,0.798049746802062,0.682934423016537,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0.249810577937946,0,0.859484216193193,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,2.17748185847803,4.86021377994086,4.41682418837902,0.285650984403804,0,1.34739879136449,2.58782771749238,1.83843757322004,1.10115880999389,0,0,0.923204014111357,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0,0,0.260240885925407,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0.646703978798527,1.32374256117473,1.23165786914764,0.657587197282725,0.834141747676794,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517434735131018,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,1.37016503954128,0.755393897389701,0,0.45032120322422,0,0,0.31136204275253,0.798049746802062,0.682934423016537,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0.249810577937946,0,0.859484216193193,0,0,0 | ||
|short_description=p@chr12:28026549..28026562,- | |||
}} | }} |
Latest revision as of 22:55, 4 August 2015
Short description: | p@chr12:28026549..28026562, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28026549..28026562, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.77e-48 | 6 |
hippocampal neuron | 1.13e-24 | 3 |
CNS neuron (sensu Vertebrata) | 5.48e-22 | 23 |
neuroblast (sensu Vertebrata) | 5.48e-22 | 23 |
neuron | 3.38e-15 | 33 |
neuronal stem cell | 3.38e-15 | 33 |
neuroblast | 3.38e-15 | 33 |
electrically signaling cell | 3.38e-15 | 33 |
electrically responsive cell | 8.74e-13 | 39 |
electrically active cell | 8.74e-13 | 39 |
neural cell | 1.51e-11 | 43 |
ectodermal cell | 2.84e-11 | 44 |
neurectodermal cell | 2.84e-11 | 44 |
embryonic cell | 7.27e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.34e-18 | 21 |
cerebral hemisphere | 1.34e-18 | 21 |
pallium | 1.34e-18 | 21 |
brain grey matter | 2.19e-13 | 29 |
regional part of telencephalon | 2.19e-13 | 29 |
telencephalon | 2.19e-13 | 29 |
gray matter | 2.30e-11 | 34 |
Ammon's horn | 5.82e-11 | 7 |
lobe parts of cerebral cortex | 5.82e-11 | 7 |
hippocampal formation | 5.82e-11 | 7 |
limbic system | 5.82e-11 | 7 |
limbic lobe | 5.82e-11 | 7 |
regional part of forebrain | 7.39e-10 | 39 |
forebrain | 7.39e-10 | 39 |
future forebrain | 7.39e-10 | 39 |
anterior neural tube | 1.33e-09 | 40 |
regional part of nervous system | 4.78e-09 | 54 |
central nervous system | 2.49e-08 | 73 |
regional part of brain | 2.71e-08 | 46 |
brain | 4.16e-08 | 47 |
future brain | 4.16e-08 | 47 |
nervous system | 4.35e-08 | 75 |
regional part of cerebral cortex | 7.43e-08 | 17 |
pre-chordal neural plate | 9.29e-08 | 49 |
neural tube | 2.77e-07 | 52 |
neural rod | 2.77e-07 | 52 |
future spinal cord | 2.77e-07 | 52 |
neural keel | 2.77e-07 | 52 |