FFCP PHASE1:Mm9::chr10:85810296..85810311,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=323 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:85810296..85810311,+ | |||
|description=CAGE_peak_at_chr10:85810296..85810311,+ | |description=CAGE_peak_at_chr10:85810296..85810311,+ | ||
|id=chr10:85810296..85810311,+ | |id=chr10:85810296..85810311,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.36e-13,2;CL:0002604,6.36e-13,2;CL:0000680,6.12e-10,6;CL:0000187,6.12e-10,6;CL:0000056,6.12e-10,6;CL:0000192,2.36e-09,3;CL:0000359,2.36e-09,3;CL:0002539,2.36e-09,3;CL:0000514,2.36e-09,3;CL:0000222,1.37e-08,7;CL:0000355,8.81e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.36e-09,3;UBERON:0004237,2.36e-09,3;UBERON:0004695,2.36e-09,3;UBERON:0002111,2.36e-09,3;UBERON:0004178,2.36e-09,3;UBERON:0000947,3.21e-07,4;UBERON:0001637,3.21e-07,4;UBERON:0004573,3.21e-07,4;UBERON:0003509,3.21e-07,4;UBERON:0004571,3.21e-07,4;UBERON:0010191,3.21e-07,4;UBERON:0004572,3.21e-07,4;UBERON:0001134,8.81e-07,9;UBERON:0002036,8.81e-07,9;UBERON:0002385,8.81e-07,9;UBERON:0000486,8.81e-07,9;UBERON:0007503,8.81e-07,9;UBERON:0001015,8.81e-07,9;UBERON:0002329,8.81e-07,9;UBERON:0003082,8.81e-07,9;UBERON:0003059,8.81e-07,9;UBERON:0007282,8.81e-07,9;UBERON:0004290,8.81e-07,9;UBERON:0009618,8.81e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77690453926732,2.43304634926835,0.367093504323363,0,0.65407546914134,1.75748946187577,1.1665793944457,0.139986421625363,0,0,0,0,0,0.286533439938757,1.54701627683233,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.45839474333043,0.589257170947335,0.142371680799103,0,0.37863096666592,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.60289056221049,0,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.878342391034642,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0,0.407357455401265,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0.512454881139399,0,1.03481348295606,0,0.378212160335639,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,1.31333971263276,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,1.1270773567308,0.407302655690628,0.193952487167626,0.49095073923223,0.126473074248515,1.03327103585722,1.72698600625512,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.476087281772027,1.17080188714679,0.315270288212382,0.8858587585951,0.159454768657487,1.14704320301017,0.863424909329478,1.44649058581512,0,0,0,0,0,0.35163505977661,0.491804836130026,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0.35613120733451,0,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0,0.120625849856312,0.358117032009409,0,0,0.18542530201051,0,0,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0.168956125490778,0.234714477291508,0,0.314578033277133,0,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0.214368379079066,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77690453926732,2.43304634926835,0.367093504323363,0,0.65407546914134,1.75748946187577,1.1665793944457,0.139986421625363,0,0,0,0,0,0.286533439938757,1.54701627683233,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.45839474333043,0.589257170947335,0.142371680799103,0,0.37863096666592,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.60289056221049,0,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.878342391034642,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0,0.407357455401265,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0.512454881139399,0,1.03481348295606,0,0.378212160335639,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,1.31333971263276,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,1.1270773567308,0.407302655690628,0.193952487167626,0.49095073923223,0.126473074248515,1.03327103585722,1.72698600625512,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0.476087281772027,1.17080188714679,0.315270288212382,0.8858587585951,0.159454768657487,1.14704320301017,0.863424909329478,1.44649058581512,0,0,0,0,0,0.35163505977661,0.491804836130026,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0.35613120733451,0,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0,0.120625849856312,0.358117032009409,0,0,0.18542530201051,0,0,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0.168956125490778,0.234714477291508,0,0.314578033277133,0,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0.214368379079066,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr10:85810296..85810311,+ | |short_description=p@chr10:85810296..85810311,+ | ||
}} | }} |
Latest revision as of 23:09, 4 August 2015
Short description: | p@chr10:85810296..85810311, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85810296..85810311, + |
Coexpression cluster: | MCL_coexpression_mm9:323 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.36e-13 | 2 |
astrocyte of the hippocampus | 6.36e-13 | 2 |
muscle precursor cell | 6.12e-10 | 6 |
muscle cell | 6.12e-10 | 6 |
myoblast | 6.12e-10 | 6 |
smooth muscle cell | 2.36e-09 | 3 |
vascular associated smooth muscle cell | 2.36e-09 | 3 |
aortic smooth muscle cell | 2.36e-09 | 3 |
smooth muscle myoblast | 2.36e-09 | 3 |
mesodermal cell | 1.37e-08 | 7 |
multi-potent skeletal muscle stem cell | 8.81e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.36e-09 | 3 |
blood vessel smooth muscle | 2.36e-09 | 3 |
arterial system smooth muscle | 2.36e-09 | 3 |
artery smooth muscle tissue | 2.36e-09 | 3 |
aorta smooth muscle tissue | 2.36e-09 | 3 |
aorta | 3.21e-07 | 4 |
artery | 3.21e-07 | 4 |
systemic artery | 3.21e-07 | 4 |
arterial blood vessel | 3.21e-07 | 4 |
systemic arterial system | 3.21e-07 | 4 |
aortic system | 3.21e-07 | 4 |
arterial system | 3.21e-07 | 4 |
skeletal muscle tissue | 8.81e-07 | 9 |
striated muscle tissue | 8.81e-07 | 9 |
muscle tissue | 8.81e-07 | 9 |
multilaminar epithelium | 8.81e-07 | 9 |
epithelial vesicle | 8.81e-07 | 9 |
musculature | 8.81e-07 | 9 |
somite | 8.81e-07 | 9 |
myotome | 8.81e-07 | 9 |
presomitic mesoderm | 8.81e-07 | 9 |
presumptive segmental plate | 8.81e-07 | 9 |
dermomyotome | 8.81e-07 | 9 |
trunk paraxial mesoderm | 8.81e-07 | 9 |