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FFCP PHASE1:Mm9::chr2:31325808..31325830,+: Difference between revisions

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{{FFCP|EntrezGene=11898|HGNC=|MCL_coexpression_id=120|UniProt=P16460,Q3UJ34|association_with_transcript=18bp_to_NM_007494,uc008jdu.1_5end|description=CAGE_peak_1_at_Ass1_5end|id=chr2:31325808..31325830,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.44e-11!22;UBERON:0007499!1.44e-11!22;UBERON:0006925!1.44e-11!22;UBERON:0009497!1.44e-11!22;UBERON:0000015!1.44e-11!22;UBERON:0002423!1.44e-11!22;UBERON:0006235!1.44e-11!22;UBERON:0008835!1.44e-11!22;UBERON:0003894!1.44e-11!22;UBERON:0004161!1.44e-11!22;UBERON:0008836!1.44e-11!22;UBERON:0009854!2.93e-11!23;UBERON:0009856!2.93e-11!23;UBERON:0002365!4.90e-11!25;UBERON:0002330!4.90e-11!25;UBERON:0005172!4.77e-09!49;UBERON:0005173!4.77e-09!49;UBERON:0002417!4.77e-09!49;UBERON:0000916!4.77e-09!49;UBERON:0009569!3.50e-07!66;UBERON:0005256!4.22e-07!47;UBERON:0005177!4.81e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.35e-11,22;UBERON:0007499,1.35e-11,22;UBERON:0006925,1.35e-11,22;UBERON:0009497,1.35e-11,22;UBERON:0000015,1.35e-11,22;UBERON:0002423,1.35e-11,22;UBERON:0006235,1.35e-11,22;UBERON:0008835,1.35e-11,22;UBERON:0003894,1.35e-11,22;UBERON:0004161,1.35e-11,22;UBERON:0008836,1.35e-11,22;UBERON:0009854,2.74e-11,23;UBERON:0009856,2.74e-11,23;UBERON:0002365,4.58e-11,25;UBERON:0002330,4.58e-11,25;UBERON:0002100,2.74e-09,90;UBERON:0005172,4.53e-09,49;UBERON:0005173,4.53e-09,49;UBERON:0002417,4.53e-09,49;UBERON:0000916,4.53e-09,49;UBERON:0005177,5.10e-09,79;UBERON:0005256,1.55e-08,45;UBERON:0003104,4.07e-08,61;UBERON:0009142,4.07e-08,61;UBERON:0009569,3.37e-07,66|phase1_expression=0,0,0.454999239389536,0.30246421130683,1.50268718983904,0.671517087647559,0.700837921786577,32.6682008307188,22.5261955442667,16.1504523162175,6.33506482434368,6.94017783259427,35.0961496358972,27.0129043474702,0.999329285446988,1.82227740650843,0.699561878128147,5.67831897644828,5.07323404341233,2.12194825899015,83.7676407988037,20.8510997521859,10.9703911438353,2.87986361028132,3.44113921600755,0.57423196411502,0.430761996159075,0.215471232685889,0.570070258369122,0.756090389279792,0.221730510655305,0,0.61506478758457,0,1.1554064790051,2.32728503501889,2.6542016314108,2.51118978442145,10.1573594788094,5.75876118371178,0,0,0.971020706062307,39.2798072083801,45.6196190487816,15.6014739337429,42.2491325947941,14.171635164729,15.378032791413,13.4156630361256,4.75953833526233,15.8127820801469,3.52343472721246,23.211588544363,12.0993767691287,5.14518872071894,3.72493471920384,8.25075347643908,1.01158230429799,0,0,31.1736969503602,14.2287167377782,26.0970918011606,14.8329954385046,14.209602298922,8.08920298399693,12.2949857702897,0,0,0,2.85650984403804,2.42955395046775,0.122490799214954,0.0958454710182364,0,4.40463523997555,7.40586560894089,8.44835932909339,0.395658863190582,0.548925861614458,0.52091337055676,4.74611098302348,10.1297269805702,9.77908785771585,0.883885756421003,1.13897344639282,0.559198337475902,1.06016670666458,2.34271836331035,5.79728977403356,1210.61639491281,472.580076926887,726.440495944502,1220.92988838417,1152.77318050144,314.595501095124,1.36344258062446,1.81850203222008,0.70667914902068,0.14084341977668,0,0,0,14.2884087067401,17.2284708523067,15.6712577954583,504.806932237964,17.3488382043605,12.9144660986398,1.90833859442749,8.52503339273995,13.1450833435953,7.23468674652588,21.2835559915626,7.41432888845085,70.6977607720309,3.61498392299779,12.3845477272982,0.808834249737046,1.54589062922275,3.39412677194655,9.31958806090611,2.63502717310392,1.67557365450764,4.34276993854605,14.3778149407104,11.3981518888747,16.6461997465715,15.7280171375064,10.0650132620098,0.628271760564322,7.12679712788333,2.81287003063364,16.6230435647648,7.78758062725237,2.64782346010822,5.10068579501381,10.867078612648,4.62972082950243,1.56144531555244,1.60931473103431,4.32149111532838,7.83665052745718,10.8178033650611,11.5302348256365,15.9292931751539,10.8655415710387,1.07783996466421,0.945530400839096,1.58356011747554,3.28793598641362,1.66828349535359,5.2237824978325,5.35033554660653,2.58744546864041,18.9597560574573,14.9261786126535,19.6072814582959,2.27838349789052,1.87620847984877,0.720248245844059,2.13070262026689,0.983821158737019,2.00547246753592,1.16266972375204,1.07309360559848,1.05088808130453,0.822799249567402,0.985004784474571,0.972825714550269,1.16959989940266,1.75640092232841,1.20785776884335,8.62188789112922,1.54356918568927,0,3.17340679996253,1.70630600428187,3.0190767341857,11.5980715189884,65.5471455025863,116.303716930867,229.792556343971,5.21981967698963,170.298719184627,124.913598773734,125.342577385925,96.3122590368453,1.79763881730844,5.18731319699266,4.58024928485045,2.65535061334314,4.68418901699888,12.3978509240388,23.0126000465205,38.0146874848546,96.0860732497364,200.712768832393,415.67017671056,357.48610329481,573.550017908529,1124.44481454156,8.67594549723689,24.3733153940372,20.9121764517914,50.5121702257372,113.594442243388,174.9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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11898
|HGNC=
|MCL_coexpression_id=120
|TSSclassifier=NA
|UniProt=uniprot:P16460,uniprot:Q3UJ34
|association_with_transcript=18bp_to_NM_007494,uc008jdu.1_5end
|cluster_id=chr2:31325808..31325830,+
|description=CAGE_peak_1_at_Ass1_5end
|id=chr2:31325808..31325830,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.35e-11,22;UBERON:0007499,1.35e-11,22;UBERON:0006925,1.35e-11,22;UBERON:0009497,1.35e-11,22;UBERON:0000015,1.35e-11,22;UBERON:0002423,1.35e-11,22;UBERON:0006235,1.35e-11,22;UBERON:0008835,1.35e-11,22;UBERON:0003894,1.35e-11,22;UBERON:0004161,1.35e-11,22;UBERON:0008836,1.35e-11,22;UBERON:0009854,2.74e-11,23;UBERON:0009856,2.74e-11,23;UBERON:0002365,4.58e-11,25;UBERON:0002330,4.58e-11,25;UBERON:0002100,2.74e-09,90;UBERON:0005172,4.53e-09,49;UBERON:0005173,4.53e-09,49;UBERON:0002417,4.53e-09,49;UBERON:0000916,4.53e-09,49;UBERON:0005177,5.10e-09,79;UBERON:0005256,1.55e-08,45;UBERON:0003104,4.07e-08,61;UBERON:0009142,4.07e-08,61;UBERON:0009569,3.37e-07,66
|phase1_expression=0,0,0.454999239389536,0.30246421130683,1.50268718983904,0.671517087647559,0.700837921786577,32.6682008307188,22.5261955442667,16.1504523162175,6.33506482434368,6.94017783259427,35.0961496358972,27.0129043474702,0.999329285446988,1.82227740650843,0.699561878128147,5.67831897644828,5.07323404341233,2.12194825899015,83.7676407988037,20.8510997521859,10.9703911438353,2.87986361028132,3.44113921600755,0.57423196411502,0.430761996159075,0.215471232685889,0.570070258369122,0.756090389279792,0.221730510655305,0,0.61506478758457,0,1.1554064790051,2.32728503501889,2.6542016314108,2.51118978442145,10.1573594788094,5.75876118371178,0,0,0.971020706062307,39.2798072083801,45.6196190487816,15.6014739337429,42.2491325947941,14.171635164729,15.378032791413,13.4156630361256,4.75953833526233,15.8127820801469,3.52343472721246,23.211588544363,12.0993767691287,5.14518872071894,3.72493471920384,8.25075347643908,1.01158230429799,0,0,31.1736969503602,14.2287167377782,26.0970918011606,14.8329954385046,14.209602298922,8.08920298399693,12.2949857702897,0,0,0,2.85650984403804,2.42955395046775,0.122490799214954,0.0958454710182364,0,4.40463523997555,7.40586560894089,8.44835932909339,0.395658863190582,0.548925861614458,0.52091337055676,4.74611098302348,10.1297269805702,9.77908785771585,0.883885756421003,1.13897344639282,0.559198337475902,1.06016670666458,2.34271836331035,5.79728977403356,1210.61639491281,472.580076926887,726.440495944502,1220.92988838417,1152.77318050144,314.595501095124,1.36344258062446,1.81850203222008,0.70667914902068,0.14084341977668,0,0,0,14.2884087067401,17.2284708523067,15.6712577954583,504.806932237964,17.3488382043605,12.9144660986398,1.90833859442749,8.52503339273995,13.1450833435953,7.23468674652588,21.2835559915626,7.41432888845085,70.6977607720309,3.61498392299779,12.3845477272982,0.808834249737046,1.54589062922275,3.39412677194655,9.31958806090611,2.63502717310392,1.67557365450764,4.34276993854605,14.3778149407104,11.3981518888747,16.6461997465715,15.7280171375064,10.0650132620098,0.628271760564322,7.12679712788333,2.81287003063364,16.6230435647648,7.78758062725237,2.64782346010822,5.10068579501381,10.867078612648,4.62972082950243,1.56144531555244,1.60931473103431,4.32149111532838,7.83665052745718,10.8178033650611,11.5302348256365,15.9292931751539,10.8655415710387,1.07783996466421,0.945530400839096,1.58356011747554,3.28793598641362,1.66828349535359,5.2237824978325,5.35033554660653,2.58744546864041,18.9597560574573,14.9261786126535,19.6072814582959,2.27838349789052,1.87620847984877,0.720248245844059,2.13070262026689,0.983821158737019,2.00547246753592,1.16266972375204,1.07309360559848,1.05088808130453,0.822799249567402,0.985004784474571,0.972825714550269,1.16959989940266,1.75640092232841,1.20785776884335,8.62188789112922,1.54356918568927,0,3.17340679996253,1.70630600428187,3.0190767341857,11.5980715189884,65.5471455025863,116.303716930867,229.792556343971,5.21981967698963,170.298719184627,124.913598773734,125.342577385925,96.3122590368453,1.79763881730844,5.18731319699266,4.58024928485045,2.65535061334314,4.68418901699888,12.3978509240388,23.0126000465205,38.0146874848546,96.0860732497364,200.712768832393,415.67017671056,357.48610329481,573.550017908529,1124.44481454156,8.67594549723689,24.3733153940372,20.9121764517914,50.5121702257372,113.594442243388,174.927960173835,237.63700953437,584.173222070453,189.172813686588,79.072513590045,229.983105659135,302.052467574895,686.256811382303,1511.96140116268,2790.45332756572,10.7156850296631,1.32643988239339,2.77040459951444,2.20668611507745,5.63256595892405,20.7707759227852,30.9456733151818,10.7323506321789,3.15270288212382,7.9727288273559,3.50800491046472,3.60499292374624,4.31712454664739,5.49666422609744,4.52373851817817,39.1612092349471,16.7199852826472,11.0374698521893,10.2752377592187,7.73597131508541,2.62295912602681,0.757412781613119,271.652576917397,278.382824683503,229.210495187698,148.87756112444,86.2230868698865,52.9353112575117,303.608026256171,211.008729411967,224.918745651572,8.03303291054518,7.09700426041343,9.08134578703002,2.11753047159649,7.75359577970917,5.30980553359851,1.94224508923985,27.2091201268276,124.290747559137,172.751607335252,153.41013882402,72.3599220871019,9.81541069589265,23.5288269733916,20.542389265828,8.4334886859999,15.470331487228,34.3844001811326,0.900305470156551,0.646793418913773,0.857348140126369,0.532020700926821,1.42695054081656,3.1264313914403,39.8849083340125,53.2704777304622,44.4847348814022,22.4938966016061,16.3237390412065,8.39615018818709,9.52944213864862,24.3519581766398,36.1109979439135,13.9910801582328,7.6024373824309,5.98048082792484,7.01715351074956,1.66675074632741,3.01389531207506,2.05041341581538,5.71945433016307,8.15896463970505,10.9162132812453,13.1289975114203,10.5013767981662,1.73984796469624,12.8091264289915,17.38885987231,17.1452402731864,29.478946105734,11.5983337890946,22.4817399572914,9.42321391142507,2.98114438571124,7.45607175704311,11.837551712368,5.38259565758324,4.30192075188454,7.19469396872976,8.78286799648571,10.1373675294467,7.3935060346825,13.150642869239,7.02557607652263,2.17425708743405,7.4887801627045,4.4241556887945,2.8381530140623,5.34096977257102,4.02754551231165,3.93858730468459,3.17890167650024,4.80781798079875,3.83992770653901,5.14928894735553,5.25826965919499,7.66279007039988,6.33476224808391,3.94468550725351,6.19447581562315,7.70883304291719,72.3674207999451,117.973721441461,115.336731442122,11.7845652359636,1.31377732815827,12.0880072016395,15.0057865355346,27.0848936179096,1.6942555278512,0.920650473014354,0,0.68741272937475,2.74033007908257,1.5107877947794,0.675022500231806,2.70192721934532,2.71885445390523,0.51776031175182,1.55681021376265,1.59609949360412,3.24393850932855,10.6966955510049,17.8171188233785,24.6350301323019,27.1141007917971,27.6086976700118,17.0087181083662,25.2697211763797,22.3061783903411,20.3716448696962,23.5040183749405,22.9850297133481,24.7546871198693,28.1013277857013,23.5245181668057,16.7831021803423,31.3185284610513,12.8063060516926,13.0290315906458,15.795346748181,20.028639955575,16.4241450794531,11.387235030255,13.7075664784516,19.7562210702594,28.411528835287,24.7163487199468,24.6902599529405,24.2015436973315,22.1635085345018,6.54769669071503,20.2967261953615,27.7785519812844,4.24677982494508,40.9380314779465,44.2634371339495,2.48674831689496,5.7353768971074,3.01428186306548
|short_description=p1@Ass1
}}

Revision as of 00:43, 5 August 2015

Short description:p1@Ass1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ass1_5end
Coexpression cluster:MCL_coexpression_mm9:120
Association with transcript: 18bp_to_NM_007494, uc008jdu.1_5end
EntrezGene:11898
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ass1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.94
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E827.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A383.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.97
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D839.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D945.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.60
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B742.25
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.17
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C631.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C726.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E812.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71210.62
Mouse hepatocyte, donor1.CNhs13078.11714-123C4472.58
Mouse hepatocyte, donor3.CNhs12615.11637-122C8726.44
Mouse hepatocyte, donor6.CNhs13090.11822-124F41220.93
Mouse hepatocyte, donor8.CNhs13091.11824-124F61152.77
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7314.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6504.81
accessory axillary lymph node, adult.CNhs10475.1063-29H917.35
adrenal gland, adult.CNhs10508.49-24D712.91
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I113.15
adrenal gland, embryo E18.CNhs11026.1262-18F57.23
adrenal gland, neonate N00.CNhs11191.1311-23C121.28
adrenal gland, neonate N25.CNhs11223.1377-27I37.41
amnion, adult pregnant day17.5.CNhs10488.583-22A870.70
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.38
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.65
corpora quadrigemina, adult.CNhs10501.16-22A415.73
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F216.62
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B210.87
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C610.82
eyeball, neonate N01.CNhs11140.1532-43E711.53
eyeball, neonate N02.CNhs11205.1551-44G815.93
eyeball, neonate N16.CNhs11188.777-19A210.87
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.93
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.61
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E88.62
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D811.60
intestine, embryo E16.CNhs10585.463-22H465.55
intestine, embryo E17.CNhs10582.482-18D3116.30
intestine, embryo E18.CNhs10526.1289-20F7229.79
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E9170.30
intestine, neonate N06.CNhs11102.688-20B8124.91
intestine, neonate N07.CNhs11095.720-20F2125.34
intestine, neonate N10.CNhs11098.755-23A596.31
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I223.01
kidney, embryo E18.CNhs11001.1288-20C738.01
kidney, neonate N00.CNhs11214.646-21G796.09
kidney, neonate N10.CNhs11206.758-6D5200.71
kidney, neonate N20.CNhs11113.832-19I1415.67
kidney, neonate N25.CNhs11122.1353-25F3357.49
kidney, neonate N30.CNhs11203.1385-42H1573.55
liver, adult pregnant day01.CNhs10466.508-5B21124.44
liver, embryo E12.CNhs10601.355-15F88.68
liver, embryo E13.CNhs10524.378-3H624.37
liver, embryo E14.CNhs10594.409-16E120.91
liver, embryo E15.CNhs10520.433-16D750.51
liver, embryo E16.CNhs10523.462-17F5113.59
liver, embryo E17.CNhs10510.481-18A3174.93
liver, embryo E18.CNhs10579.499-43G4237.64
liver, neonate N00.CNhs11117.641-24F4584.17
liver, neonate N03.CNhs11123.1345-25G2189.17
liver, neonate N06.CNhs11101.684-20A879.07
liver, neonate N07.CNhs11103.716-20H2229.98
liver, neonate N10.CNhs11115.751-24B9302.05
liver, neonate N20.CNhs11220.823-25A3686.26
liver, neonate N25.CNhs11198.1368-26H11511.96
liver, neonate N30.CNhs11106.1382-42D12790.45
lung, adult.CNhs10474.28-22B110.72
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A620.77
lung, embryo E18.CNhs10583.1287-20I630.95
lung, neonate N00.CNhs11224.640-42C610.73
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A37.97
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A139.16
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1271.65
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2278.38
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3229.21
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7148.88
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D886.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D952.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4303.61
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5211.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6224.92
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I77.10
ovary, embryo E18.CNhs11040.505-44H79.08
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G67.75
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F227.21
pancreas, embryo E16.CNhs11003.460-26E5124.29
pancreas, embryo E17.CNhs10599.1558-45G3172.75
pancreas, embryo E18.CNhs10580.1535-43I7153.41
pancreas, neonate N00.CNhs11105.645-26G972.36
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D823.53
pancreas, neonate N16.CNhs11136.787-43B620.54
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G834.38
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E939.88
placenta, adult pregnant day10.CNhs10472.539-13I753.27
placenta, adult pregnant day17.CNhs10464.577-18G344.48
prostate, adult.CNhs10470.859-1F822.49
skin, adult.CNhs10492.30-1C316.32
skin, neonate N00.CNhs11124.650-25G48.40
skin, neonate N03.CNhs11215.662-22H39.53
skin, neonate N06.CNhs11097.693-20I524.35
skin, neonate N10.CNhs11108.762-6C436.11
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.13
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G812.81
stomach, embryo E16.CNhs11022.459-17D417.39
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C629.48
stomach, neonate N03.CNhs11193.1340-24B811.60
stomach, neonate N07.CNhs11210.718-18A922.48
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G511.84
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I58.78
testis, embryo E18.CNhs11027.503-18G510.14
testis, neonate N00.CNhs11189.1300-22B77.39
testis, neonate N07.CNhs11222.726-26I413.15
testis, neonate N10.CNhs11204.763-44D97.03
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C45.15
thymus, neonate N07.CNhs11211.713-19D35.26
thymus, neonate N10.CNhs11194.748-24E47.66
thymus, neonate N20.CNhs11186.820-7A26.33
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G26.19
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H372.37
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7117.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5115.34
urinary bladder, adult.CNhs10481.879-12E411.78
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D515.01
vesicular gland, adult.CNhs10491.51-27F827.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B117.82
whole body, embryo E16.CNhs10514.453-14F224.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G524.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G531.32
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.03
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.42
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G528.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.30
whole body, embryo E17.5.CNhs10513.490-9F927.78
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B340.94
whole body, neonate N00.CNhs10525.657-19C244.26
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver1.35e-1122
epithelial sac1.35e-1122
digestive gland1.35e-1122
epithelium of foregut-midgut junction1.35e-1122
anatomical boundary1.35e-1122
hepatobiliary system1.35e-1122
foregut-midgut junction1.35e-1122
hepatic diverticulum1.35e-1122
liver primordium1.35e-1122
septum transversum1.35e-1122
liver bud1.35e-1122
digestive tract diverticulum2.74e-1123
sac2.74e-1123
exocrine gland4.58e-1125
exocrine system4.58e-1125
trunk2.74e-0990
abdomen element4.53e-0949
abdominal segment element4.53e-0949
abdominal segment of trunk4.53e-0949
abdomen4.53e-0949
trunk region element5.10e-0979
trunk mesenchyme1.55e-0845
mesenchyme4.07e-0861
entire embryonic mesenchyme4.07e-0861
subdivision of trunk3.37e-0766
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