FFCP PHASE1:Mm9::chr9:41387743..41387752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |MCL_coexpression_id=100 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:41387743..41387752,+ | |||
|description=CAGE_peak_at_chr9:41387743..41387752,+ | |description=CAGE_peak_at_chr9:41387743..41387752,+ | ||
|id=chr9:41387743..41387752,+ | |id=chr9:41387743..41387752,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.24e-17!23;CL:0000337!6.24e-17!23;CL:0000393!4.07e-14!39;CL:0000211!4.07e-14!39;CL:0000540!9.73e-12!33;CL:0000047!9.73e-12!33;CL:0000031!9.73e-12!33;CL:0000404!9.73e-12!33;CL:0002609!4.97e-11!6;CL:0000055!1.49e-10!50;CL:0002319!1.04e-08!43;CL:0000221!2.15e-08!44;CL:0000133!2.15e-08!44 | |ontology_enrichment_celltype=CL:0000117!6.24e-17!23;CL:0000337!6.24e-17!23;CL:0000393!4.07e-14!39;CL:0000211!4.07e-14!39;CL:0000540!9.73e-12!33;CL:0000047!9.73e-12!33;CL:0000031!9.73e-12!33;CL:0000404!9.73e-12!33;CL:0002609!4.97e-11!6;CL:0000055!1.49e-10!50;CL:0002319!1.04e-08!43;CL:0000221!2.15e-08!44;CL:0000133!2.15e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,8.11e-66,6;CL:0002608,1.02e-33,3;CL:0000117,2.34e-23,23;CL:0000337,2.34e-23,23;CL:0000540,2.59e-16,33;CL:0000047,2.59e-16,33;CL:0000031,2.59e-16,33;CL:0000404,2.59e-16,33;CL:0000393,8.25e-14,39;CL:0000211,8.25e-14,39;CL:0002319,1.59e-12,43;CL:0000221,3.05e-12,44;CL:0000133,3.05e-12,44;CL:0002321,1.15e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.57e-09!52;UBERON:0005068!1.57e-09!52;UBERON:0006241!1.57e-09!52;UBERON:0007135!1.57e-09!52;UBERON:0000073!1.84e-09!75;UBERON:0001016!1.84e-09!75;UBERON:0001017!3.65e-09!73;UBERON:0005743!3.65e-09!73;UBERON:0002020!2.64e-08!34 | |ontology_enrichment_uberon=UBERON:0001049!1.57e-09!52;UBERON:0005068!1.57e-09!52;UBERON:0006241!1.57e-09!52;UBERON:0007135!1.57e-09!52;UBERON:0000073!1.84e-09!75;UBERON:0001016!1.84e-09!75;UBERON:0001017!3.65e-09!73;UBERON:0005743!3.65e-09!73;UBERON:0002020!2.64e-08!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.01e-19,21;UBERON:0001869,5.01e-19,21;UBERON:0000203,5.01e-19,21;UBERON:0003528,1.41e-18,29;UBERON:0002791,1.41e-18,29;UBERON:0001893,1.41e-18,29;UBERON:0002020,7.40e-16,34;UBERON:0001954,6.47e-15,7;UBERON:0003022,6.47e-15,7;UBERON:0002421,6.47e-15,7;UBERON:0000349,6.47e-15,7;UBERON:0002600,6.47e-15,7;UBERON:0002780,7.88e-14,39;UBERON:0001890,7.88e-14,39;UBERON:0006240,7.88e-14,39;UBERON:0003080,1.75e-13,40;UBERON:0002616,1.00e-11,46;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0003056,5.25e-11,49;UBERON:0001049,2.28e-10,52;UBERON:0005068,2.28e-10,52;UBERON:0006241,2.28e-10,52;UBERON:0007135,2.28e-10,52;UBERON:0000073,5.55e-10,54;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0010371,2.35e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.55534418462716,2.16009501330705,1.47227472945967,0.285650984403804,0.220868540951614,1.34739879136449,2.87536413054709,1.83843757322004,0,0,0.153606533256243,0.527545150920775,0.457438218012048,0.52091337055676,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,1.13088916901578,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0,0.38581844092741,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.282328141245992,0,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.55534418462716,2.16009501330705,1.47227472945967,0.285650984403804,0.220868540951614,1.34739879136449,2.87536413054709,1.83843757322004,0,0,0.153606533256243,0.527545150920775,0.457438218012048,0.52091337055676,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,1.13088916901578,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0,0.38581844092741,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.282328141245992,0,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p@chr9:41387743..41387752,+ | |short_description=p@chr9:41387743..41387752,+ | ||
}} | }} |
Latest revision as of 02:36, 5 August 2015
Short description: | p@chr9:41387743..41387752, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:41387743..41387752, + |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 8.11e-66 | 6 |
hippocampal neuron | 1.02e-33 | 3 |
CNS neuron (sensu Vertebrata) | 2.34e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.34e-23 | 23 |
neuron | 2.59e-16 | 33 |
neuronal stem cell | 2.59e-16 | 33 |
neuroblast | 2.59e-16 | 33 |
electrically signaling cell | 2.59e-16 | 33 |
electrically responsive cell | 8.25e-14 | 39 |
electrically active cell | 8.25e-14 | 39 |
neural cell | 1.59e-12 | 43 |
ectodermal cell | 3.05e-12 | 44 |
neurectodermal cell | 3.05e-12 | 44 |
embryonic cell | 1.15e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 5.01e-19 | 21 |
cerebral hemisphere | 5.01e-19 | 21 |
pallium | 5.01e-19 | 21 |
brain grey matter | 1.41e-18 | 29 |
regional part of telencephalon | 1.41e-18 | 29 |
telencephalon | 1.41e-18 | 29 |
gray matter | 7.40e-16 | 34 |
Ammon's horn | 6.47e-15 | 7 |
lobe parts of cerebral cortex | 6.47e-15 | 7 |
hippocampal formation | 6.47e-15 | 7 |
limbic system | 6.47e-15 | 7 |
limbic lobe | 6.47e-15 | 7 |
regional part of forebrain | 7.88e-14 | 39 |
forebrain | 7.88e-14 | 39 |
future forebrain | 7.88e-14 | 39 |
anterior neural tube | 1.75e-13 | 40 |
regional part of brain | 1.00e-11 | 46 |
brain | 1.78e-11 | 47 |
future brain | 1.78e-11 | 47 |
pre-chordal neural plate | 5.25e-11 | 49 |
neural tube | 2.28e-10 | 52 |
neural rod | 2.28e-10 | 52 |
future spinal cord | 2.28e-10 | 52 |
neural keel | 2.28e-10 | 52 |
regional part of nervous system | 5.55e-10 | 54 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
neurectoderm | 2.08e-08 | 64 |
neural plate | 2.08e-08 | 64 |
presumptive neural plate | 2.08e-08 | 64 |
ecto-epithelium | 2.35e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |