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FFCP PHASE1:Mm9::chr7:3390971..3391049,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=708
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr7:3390971..3391049,+
|description=CAGE_peak_at_chr7:3390971..3391049,+
|description=CAGE_peak_at_chr7:3390971..3391049,+
|id=chr7:3390971..3391049,+
|id=chr7:3390971..3391049,+
|ontology_enrichment_celltype=CL:0000117!3.10e-14!23;CL:0000337!3.10e-14!23;CL:0000540!8.53e-09!33;CL:0000047!8.53e-09!33;CL:0000031!8.53e-09!33;CL:0000404!8.53e-09!33;CL:0002319!2.42e-08!43;CL:0000221!3.63e-08!44;CL:0000133!3.63e-08!44
|ontology_enrichment_celltype=CL:0000117!3.10e-14!23;CL:0000337!3.10e-14!23;CL:0000540!8.53e-09!33;CL:0000047!8.53e-09!33;CL:0000031!8.53e-09!33;CL:0000404!8.53e-09!33;CL:0002319!2.42e-08!43;CL:0000221!3.63e-08!44;CL:0000133!3.63e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-16,23;CL:0000337,1.08e-16,23;CL:0000540,1.11e-08,33;CL:0000047,1.11e-08,33;CL:0000031,1.11e-08,33;CL:0000404,1.11e-08,33;CL:0002319,1.59e-07,43;CL:0000221,3.87e-07,44;CL:0000133,3.87e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.03e-24!71;UBERON:0003075!6.03e-24!71;UBERON:0007284!6.03e-24!71;UBERON:0001017!2.15e-23!73;UBERON:0005743!2.15e-23!73;UBERON:0001049!2.36e-23!52;UBERON:0005068!2.36e-23!52;UBERON:0006241!2.36e-23!52;UBERON:0007135!2.36e-23!52;UBERON:0000073!2.53e-22!75;UBERON:0001016!2.53e-22!75;UBERON:0000033!3.28e-22!63;UBERON:0003056!3.76e-22!49;UBERON:0000955!3.99e-22!50;UBERON:0006238!3.99e-22!50;UBERON:0002616!2.27e-21!49;UBERON:0002020!4.38e-21!34;UBERON:0003080!5.01e-20!40;UBERON:0002780!1.35e-19!39;UBERON:0001890!1.35e-19!39;UBERON:0006240!1.35e-19!39;UBERON:0004121!1.33e-18!102;UBERON:0000924!1.33e-18!102;UBERON:0006601!1.33e-18!102;UBERON:0002791!7.02e-18!29;UBERON:0003528!7.02e-18!29;UBERON:0001893!7.02e-18!29;UBERON:0000956!1.11e-13!21;UBERON:0001869!1.11e-13!21;UBERON:0000203!1.11e-13!21;UBERON:0000153!1.11e-11!94;UBERON:0002619!4.34e-11!17;UBERON:0007811!5.88e-11!86;UBERON:0002021!6.06e-08!10;UBERON:0000411!6.06e-08!10;UBERON:0001950!6.06e-08!10
|ontology_enrichment_uberon=UBERON:0002346!6.03e-24!71;UBERON:0003075!6.03e-24!71;UBERON:0007284!6.03e-24!71;UBERON:0001017!2.15e-23!73;UBERON:0005743!2.15e-23!73;UBERON:0001049!2.36e-23!52;UBERON:0005068!2.36e-23!52;UBERON:0006241!2.36e-23!52;UBERON:0007135!2.36e-23!52;UBERON:0000073!2.53e-22!75;UBERON:0001016!2.53e-22!75;UBERON:0000033!3.28e-22!63;UBERON:0003056!3.76e-22!49;UBERON:0000955!3.99e-22!50;UBERON:0006238!3.99e-22!50;UBERON:0002616!2.27e-21!49;UBERON:0002020!4.38e-21!34;UBERON:0003080!5.01e-20!40;UBERON:0002780!1.35e-19!39;UBERON:0001890!1.35e-19!39;UBERON:0006240!1.35e-19!39;UBERON:0004121!1.33e-18!102;UBERON:0000924!1.33e-18!102;UBERON:0006601!1.33e-18!102;UBERON:0002791!7.02e-18!29;UBERON:0003528!7.02e-18!29;UBERON:0001893!7.02e-18!29;UBERON:0000956!1.11e-13!21;UBERON:0001869!1.11e-13!21;UBERON:0000203!1.11e-13!21;UBERON:0000153!1.11e-11!94;UBERON:0002619!4.34e-11!17;UBERON:0007811!5.88e-11!86;UBERON:0002021!6.06e-08!10;UBERON:0000411!6.06e-08!10;UBERON:0001950!6.06e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-27,54;UBERON:0001049,1.99e-25,52;UBERON:0005068,1.99e-25,52;UBERON:0006241,1.99e-25,52;UBERON:0007135,1.99e-25,52;UBERON:0002346,2.02e-25,64;UBERON:0003075,2.02e-25,64;UBERON:0007284,2.02e-25,64;UBERON:0002020,6.46e-24,34;UBERON:0001017,2.60e-23,73;UBERON:0003056,2.91e-23,49;UBERON:0001016,4.66e-22,75;UBERON:0000955,5.31e-22,47;UBERON:0006238,5.31e-22,47;UBERON:0003080,3.69e-21,40;UBERON:0002616,3.88e-21,46;UBERON:0002780,1.20e-20,39;UBERON:0001890,1.20e-20,39;UBERON:0006240,1.20e-20,39;UBERON:0003528,4.21e-20,29;UBERON:0002791,4.21e-20,29;UBERON:0001893,4.21e-20,29;UBERON:0010371,1.64e-19,73;UBERON:0004121,5.31e-19,95;UBERON:0000924,5.31e-19,95;UBERON:0006601,5.31e-19,95;UBERON:0000956,4.36e-15,21;UBERON:0001869,4.36e-15,21;UBERON:0000203,4.36e-15,21;UBERON:0010314,6.28e-15,92;UBERON:0002619,5.17e-12,17;UBERON:0002021,3.49e-09,10;UBERON:0000411,3.49e-09,10;UBERON:0001950,3.49e-09,10
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,1.74420125104357,0.878744730937887,1.55543919259427,0.55994568650145,1.43752564364972,0,0,0,0,0,0.515672092277442,6.87875966922632,7.40587370980846,7.60597684207415,0,0,0,0,0,3.29560121570245,2.68952813725088,7.77672092313582,11.2054928815303,8.41299845405528,6.85562362569129,5.74258206474195,9.79926393719632,7.95517409451362,11.0306254393203,5.50579404996943,6.00130489000382,4.45458946443106,9.10015385338338,13.8146341839639,17.1901412283731,1.67509799400829,3.37657566019008,3.36156145108982,10.0173719061047,11.6744778255264,5.59198337475902,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0.890652834388949,2.08182392119363,0.913396434936424,1.84492397804847,1.20578112442098,0.587943535678524,0,0,0,0,0,0.441683036920787,0,0,2.34224637609238,1.46612694769419,0,0,0,0,3.44518470631092,6.40500843946077,19.6020789296068,8.8650403298061,9.2057564638919,8.3115217823824,5.84068547043927,0.611036183101898,0,0,0.210441855886474,5.46505860443356,3.21862946206862,2.16074555766419,3.46621081022145,2.58538696775046,2.562274405697,2.52994656311268,1.29351685369508,1.5089759505299,4.53854592402766,4.75068035242662,2.6303487891309,3.89266148915837,0,0.205782136407943,8.16040493955822,0,0,0,2.27838349789052,3.04883877975425,0.720248245844059,1.89395788468168,0.196764231747404,0.308534225774757,0,0.804820204198858,0.116765342367169,0,0.164167464079095,0,0,0,0,34.4875515645169,31.9004298375782,0,0,3.62590025909898,2.32236671860439,1.9330119198314,1.00841762311671,1.33426826306922,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0,0,0,0,2.0863469104839,1.5994791765362,2.25415471346161,1.22190796707189,0.581857461502877,0.420814919341911,0.252946148497029,0,0,0,0,0.667380422864376,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.89491411770485,2.28150967018836,1.35796068620151,0.469380496577004,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,2.0871576698413,1.87538698547525,0,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0,0,0.876767573733936,0,11.8888887076069,0.425820255624806,2.49291845134157,1.46598263418218,0,0,3.15614827001476,1.209294227859,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0,0,0,0,0,0.680879211507576,4.86164953884538,3.36332577835162,1.71469628025274,1.24138163549592,0.713475270408282,1.48094118541909,1.8267896946876,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0.188368457004691,0,0,0,0,0,0,3.63786392618306,0.813277868507395,0.972048067396211,1.25452977608681,0.218362563746178,0.134864346384821,0,0,0,0,1.69107881605257,5.38259565758324,4.30192075188454,4.083474955225,3.22899558694328,4.73077151374179,3.40335992072686,0.5208175393758,0.524296722128554,1.93267296660805,2.01621004380506,0,0.405450430580328,0.410843828659309,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,24.2843292325339,21.1749608793301,18.9055519435001,28.5276282690521,9.59115527678899,10.5755145634558,6.75022500231806,4.95353323546643,7.70342095273148,7.7664046762773,3.94391920819871,5.58634822761443,4.78054096111576,4.37592090722929,2.09613162627982,1.65459157605013,1.55572709461131,3.09052585858341,0.320919209591815,3.28506375292937,3.04175159868288,2.26351609663291,3.55837728385553,2.43295579138503,2.5845961030026,2.38146845641537,1.85414921511769,2.12200142510076,2.47251540481984,3.09117732282234,5.48590803816665,4.08194354166476,2.14592570952589,2.76158191601424,2.25862512996793,2.5384382367503,2.0122077016005,2.36762740294059,2.71608227691724,1.68342681497322,2.25406534435931,2.06859412988683,3.27384834535751,2.94379998253335,1.54325288784913,9.242991383704,1.16965804222704,1.50409737833809,0.765153328275374,1.10295709559758,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,1.74420125104357,0.878744730937887,1.55543919259427,0.55994568650145,1.43752564364972,0,0,0,0,0,0.515672092277442,6.87875966922632,7.40587370980846,7.60597684207415,0,0,0,0,0,3.29560121570245,2.68952813725088,7.77672092313582,11.2054928815303,8.41299845405528,6.85562362569129,5.74258206474195,9.79926393719632,7.95517409451362,11.0306254393203,5.50579404996943,6.00130489000382,4.45458946443106,9.10015385338338,13.8146341839639,17.1901412283731,1.67509799400829,3.37657566019008,3.36156145108982,10.0173719061047,11.6744778255264,5.59198337475902,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0.890652834388949,2.08182392119363,0.913396434936424,1.84492397804847,1.20578112442098,0.587943535678524,0,0,0,0,0,0.441683036920787,0,0,2.34224637609238,1.46612694769419,0,0,0,0,3.44518470631092,6.40500843946077,19.6020789296068,8.8650403298061,9.2057564638919,8.3115217823824,5.84068547043927,0.611036183101898,0,0,0.210441855886474,5.46505860443356,3.21862946206862,2.16074555766419,3.46621081022145,2.58538696775046,2.562274405697,2.52994656311268,1.29351685369508,1.5089759505299,4.53854592402766,4.75068035242662,2.6303487891309,3.89266148915837,0,0.205782136407943,8.16040493955822,0,0,0,2.27838349789052,3.04883877975425,0.720248245844059,1.89395788468168,0.196764231747404,0.308534225774757,0,0.804820204198858,0.116765342367169,0,0.164167464079095,0,0,0,0,34.4875515645169,31.9004298375782,0,0,3.62590025909898,2.32236671860439,1.9330119198314,1.00841762311671,1.33426826306922,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0,0,0,0,2.0863469104839,1.5994791765362,2.25415471346161,1.22190796707189,0.581857461502877,0.420814919341911,0.252946148497029,0,0,0,0,0.667380422864376,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.89491411770485,2.28150967018836,1.35796068620151,0.469380496577004,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,2.0871576698413,1.87538698547525,0,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0,0,0.876767573733936,0,11.8888887076069,0.425820255624806,2.49291845134157,1.46598263418218,0,0,3.15614827001476,1.209294227859,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0,0,0,0,0,0.680879211507576,4.86164953884538,3.36332577835162,1.71469628025274,1.24138163549592,0.713475270408282,1.48094118541909,1.8267896946876,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0.188368457004691,0,0,0,0,0,0,3.63786392618306,0.813277868507395,0.972048067396211,1.25452977608681,0.218362563746178,0.134864346384821,0,0,0,0,1.69107881605257,5.38259565758324,4.30192075188454,4.083474955225,3.22899558694328,4.73077151374179,3.40335992072686,0.5208175393758,0.524296722128554,1.93267296660805,2.01621004380506,0,0.405450430580328,0.410843828659309,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,24.2843292325339,21.1749608793301,18.9055519435001,28.5276282690521,9.59115527678899,10.5755145634558,6.75022500231806,4.95353323546643,7.70342095273148,7.7664046762773,3.94391920819871,5.58634822761443,4.78054096111576,4.37592090722929,2.09613162627982,1.65459157605013,1.55572709461131,3.09052585858341,0.320919209591815,3.28506375292937,3.04175159868288,2.26351609663291,3.55837728385553,2.43295579138503,2.5845961030026,2.38146845641537,1.85414921511769,2.12200142510076,2.47251540481984,3.09117732282234,5.48590803816665,4.08194354166476,2.14592570952589,2.76158191601424,2.25862512996793,2.5384382367503,2.0122077016005,2.36762740294059,2.71608227691724,1.68342681497322,2.25406534435931,2.06859412988683,3.27384834535751,2.94379998253335,1.54325288784913,9.242991383704,1.16965804222704,1.50409737833809,0.765153328275374,1.10295709559758,0
|short_description=p@chr7:3390971..3391049,+
|short_description=p@chr7:3390971..3391049,+
}}
}}

Latest revision as of 02:45, 5 August 2015

Short description:p@chr7:3390971..3391049, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr7:3390971..3391049, +
Coexpression cluster:MCL_coexpression_mm9:708
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr7:3390971..3391049+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C36.88
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F119.60
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C65.47
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I68.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E834.49
hippocampus, neonate N00.CNhs11228.627-43G131.90
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G54.73
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I83.94
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I59.24
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.08e-1623
neuroblast (sensu Vertebrata)1.08e-1623
neuron1.11e-0833
neuronal stem cell1.11e-0833
neuroblast1.11e-0833
electrically signaling cell1.11e-0833
neural cell1.59e-0743
ectodermal cell3.87e-0744
neurectodermal cell3.87e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.27e-2754
neural tube1.99e-2552
neural rod1.99e-2552
future spinal cord1.99e-2552
neural keel1.99e-2552
neurectoderm2.02e-2564
neural plate2.02e-2564
presumptive neural plate2.02e-2564
gray matter6.46e-2434
central nervous system2.60e-2373
pre-chordal neural plate2.91e-2349
nervous system4.66e-2275
brain5.31e-2247
future brain5.31e-2247
anterior neural tube3.69e-2140
regional part of brain3.88e-2146
regional part of forebrain1.20e-2039
forebrain1.20e-2039
future forebrain1.20e-2039
brain grey matter4.21e-2029
regional part of telencephalon4.21e-2029
telencephalon4.21e-2029
ecto-epithelium1.64e-1973
ectoderm-derived structure5.31e-1995
ectoderm5.31e-1995
presumptive ectoderm5.31e-1995
cerebral cortex4.36e-1521
cerebral hemisphere4.36e-1521
pallium4.36e-1521
structure with developmental contribution from neural crest6.28e-1592
regional part of cerebral cortex5.17e-1217
occipital lobe3.49e-0910
visual cortex3.49e-0910
neocortex3.49e-0910
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