FFCP PHASE1:Mm9::chr6:124668826..124668853,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=849 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000143765_5end | |association_with_transcript=0bp_to_ENSMUST00000143765_5end | ||
|cluster_id=chr6:124668826..124668853,- | |||
|description=CAGE_peak_2_at_ENSMUST00000143765_5end | |description=CAGE_peak_2_at_ENSMUST00000143765_5end | ||
|id=chr6:124668826..124668853,- | |id=chr6:124668826..124668853,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.80e-08,9;CL:0002251,2.80e-08,9;CL:0000075,5.28e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.58e-25!59;UBERON:0000160!6.63e-25!43;UBERON:0004119!7.38e-16!130;UBERON:0000925!7.38e-16!130;UBERON:0006595!7.38e-16!130;UBERON:0001007!1.07e-15!128;UBERON:0001555!1.07e-15!128;UBERON:0007026!1.07e-15!128;UBERON:0004921!1.51e-14!126;UBERON:0004185!1.51e-14!126;UBERON:0002108!3.61e-11!16;UBERON:0000344!5.74e-11!15;UBERON:0001242!1.35e-09!13;UBERON:0000060!1.35e-09!13;UBERON:0001262!1.35e-09!13;UBERON:0004786!1.35e-09!13;UBERON:0001045!3.53e-09!13;UBERON:0001264!2.01e-08!12;UBERON:0003922!2.01e-08!12;UBERON:0002114!2.01e-08!12;UBERON:0003923!2.01e-08!12;UBERON:0003924!2.01e-08!12;UBERON:0003921!2.01e-08!12;UBERON:0000485!5.89e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.72e-22,31;UBERON:0005409,3.32e-22,47;UBERON:0000344,5.85e-14,15;UBERON:0001242,3.74e-12,13;UBERON:0001262,3.74e-12,13;UBERON:0004786,3.74e-12,13;UBERON:0001264,1.31e-10,12;UBERON:0001007,2.16e-09,116;UBERON:0001555,2.16e-09,116;UBERON:0007026,2.16e-09,116;UBERON:0004119,5.88e-09,118;UBERON:0000925,5.88e-09,118;UBERON:0006595,5.88e-09,118;UBERON:0004921,2.29e-08,114;UBERON:0003350,2.80e-08,9;UBERON:0004808,2.80e-08,9;UBERON:0001277,2.80e-08,9;UBERON:0000485,1.40e-07,11;UBERON:0004923,1.86e-07,24;UBERON:0007023,4.68e-07,51 | |||
|phase1_expression=0.960893082628764,6.97950815278722,6.3699893514535,16.3330674105688,13.5241847085514,10.2406355866253,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,7.03966660290989,9.40578052375397,5.7423196411502,8.61523992318149,6.46413698057667,7.60093677825496,9.32511480111744,24.1686256614282,0,0,0,2.59966457776147,3.98963148860382,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,2.39433813620357,0,0,0,1.29894624606728,1.52015919285059,3.0331466700887,1.1418387971906,0,0,0.346970653532272,0,0,0,0,0,1.23597483867187,0,0,0,0,0,13.0474232852686,0,0,8.43008282188352,0,0,0,0,0,0,0,0,0,0,0.305518091550949,2.36373244159177,6.31806896084187,2.94618598241064,0,0,0,0.452114453507145,0.204109497453984,0.384341160854549,0.0937017245597288,0.776110112217047,0,0,0.527853372491847,0,0.834141747676794,0.696504333044333,1.23469281844766,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,6.61126416658861,0,1.39342003116263,2.44848176511977,1.21010114774006,6.44896327150124,3.61428689613862,5.21981967698963,3.62337700392824,7.28872105520782,3.78017296878187,5.06906626509712,2.69645822596266,8.42938394511308,10.1562049359727,0,0.571242563048644,0,0.203651327845314,1.16371492300575,0.420814919341911,0.885311519739602,0.738050739898011,0.470996183524124,0.493588655687202,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.757965647081939,0.325929952884052,1.01847051465113,3.28566347603903,2.01007508930179,0.952174563544055,0.780534591431195,0.788175720530955,0.221464689648775,0.956728611944923,1.96635977658886,2.59027472798843,2.16973587872267,0,0,9.83528546038072,4.96686143348518,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0.178065603667255,0.325773918707152,4.28922319728592,2.65490276679926,3.8844901784797,4.83717691143602,6.97838795096823,7.38254732201932,6.7635732547664,6.71913562237375,6.5436071305951,4.9909632973861,9.16506598013866,8.4334886859999,13.4076206222643,7.83011093233712,0.900305470156551,2.8458910432206,3.85806663056866,1.77340233642274,3.92411398724555,3.29098041204242,2.74018454203139,0.23467170806371,0.63549621259146,16.3191014560672,2.96795255294664,0.322928853391811,1.38719727334758,2.14870219205646,2.46211349617592,6.41257840585672,0,0,0.82554747185289,0,0,0,0,0,0,0,3.81868247206045,0.632671987162271,1.62655573701479,4.10420295122845,3.97267762427491,6.98760203987768,2.96701562046606,3.14083131756277,6.02038666563268,11.6653475962614,8.07741107013003,0,0,0,0.194451188344048,0.387479470433193,0,0,0.13020438484395,0,0,0,0,1.82452693761148,0.924398614483445,0.389762468933385,0.358053391334963,0,0,0.147689527174577,0.504832249740738,0.228620419965,0.302478555410522,0.0974578807397524,0.577271049841977,0.233753804363138,1.58711268530648,0,0,0,2.70465431645067,2.25218970541418,3.11357761254351,2.35805216986972,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0.209613162627982,1.10306105070008,0.666740183404846,0.824140228955577,0.962757628775446,1.26348605881899,2.28131369901216,1.88626341386076,0.936415074698824,1.15245274328765,0.918967503289812,0.476293691283074,0.811190281613988,1.73618298417335,1.64834360321323,1.32479028120958,1.71434626192708,1.24233064311536,0.238436189947321,0.726732083161643,0.752875043322645,1.26921911837515,0.73171189149109,1.31534855718921,0.950628796921032,0,1.06771516311757,0.886540341380071,2.04615521584845,1.39443157067369,1.15743966588685,0.749431733813838,1.16965804222704,1.07435527024149,0,0.441182838239031,0 | |phase1_expression=0.960893082628764,6.97950815278722,6.3699893514535,16.3330674105688,13.5241847085514,10.2406355866253,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,7.03966660290989,9.40578052375397,5.7423196411502,8.61523992318149,6.46413698057667,7.60093677825496,9.32511480111744,24.1686256614282,0,0,0,2.59966457776147,3.98963148860382,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,2.39433813620357,0,0,0,1.29894624606728,1.52015919285059,3.0331466700887,1.1418387971906,0,0,0.346970653532272,0,0,0,0,0,1.23597483867187,0,0,0,0,0,13.0474232852686,0,0,8.43008282188352,0,0,0,0,0,0,0,0,0,0,0.305518091550949,2.36373244159177,6.31806896084187,2.94618598241064,0,0,0,0.452114453507145,0.204109497453984,0.384341160854549,0.0937017245597288,0.776110112217047,0,0,0.527853372491847,0,0.834141747676794,0.696504333044333,1.23469281844766,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,6.61126416658861,0,1.39342003116263,2.44848176511977,1.21010114774006,6.44896327150124,3.61428689613862,5.21981967698963,3.62337700392824,7.28872105520782,3.78017296878187,5.06906626509712,2.69645822596266,8.42938394511308,10.1562049359727,0,0.571242563048644,0,0.203651327845314,1.16371492300575,0.420814919341911,0.885311519739602,0.738050739898011,0.470996183524124,0.493588655687202,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.757965647081939,0.325929952884052,1.01847051465113,3.28566347603903,2.01007508930179,0.952174563544055,0.780534591431195,0.788175720530955,0.221464689648775,0.956728611944923,1.96635977658886,2.59027472798843,2.16973587872267,0,0,9.83528546038072,4.96686143348518,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0.178065603667255,0.325773918707152,4.28922319728592,2.65490276679926,3.8844901784797,4.83717691143602,6.97838795096823,7.38254732201932,6.7635732547664,6.71913562237375,6.5436071305951,4.9909632973861,9.16506598013866,8.4334886859999,13.4076206222643,7.83011093233712,0.900305470156551,2.8458910432206,3.85806663056866,1.77340233642274,3.92411398724555,3.29098041204242,2.74018454203139,0.23467170806371,0.63549621259146,16.3191014560672,2.96795255294664,0.322928853391811,1.38719727334758,2.14870219205646,2.46211349617592,6.41257840585672,0,0,0.82554747185289,0,0,0,0,0,0,0,3.81868247206045,0.632671987162271,1.62655573701479,4.10420295122845,3.97267762427491,6.98760203987768,2.96701562046606,3.14083131756277,6.02038666563268,11.6653475962614,8.07741107013003,0,0,0,0.194451188344048,0.387479470433193,0,0,0.13020438484395,0,0,0,0,1.82452693761148,0.924398614483445,0.389762468933385,0.358053391334963,0,0,0.147689527174577,0.504832249740738,0.228620419965,0.302478555410522,0.0974578807397524,0.577271049841977,0.233753804363138,1.58711268530648,0,0,0,2.70465431645067,2.25218970541418,3.11357761254351,2.35805216986972,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0.209613162627982,1.10306105070008,0.666740183404846,0.824140228955577,0.962757628775446,1.26348605881899,2.28131369901216,1.88626341386076,0.936415074698824,1.15245274328765,0.918967503289812,0.476293691283074,0.811190281613988,1.73618298417335,1.64834360321323,1.32479028120958,1.71434626192708,1.24233064311536,0.238436189947321,0.726732083161643,0.752875043322645,1.26921911837515,0.73171189149109,1.31534855718921,0.950628796921032,0,1.06771516311757,0.886540341380071,2.04615521584845,1.39443157067369,1.15743966588685,0.749431733813838,1.16965804222704,1.07435527024149,0,0.441182838239031,0 | ||
|short_description=p2@ENSMUST00000143765 | |short_description=p2@ENSMUST00000143765 | ||
}} | }} |
Latest revision as of 03:03, 5 August 2015
Short description: | p2@ENSMUST00000143765 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000143765_5end |
Coexpression cluster: | MCL_coexpression_mm9:849 |
Association with transcript: | 0bp_to_ENSMUST00000143765_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.80e-08 | 9 |
epithelial cell of alimentary canal | 2.80e-08 | 9 |
columnar/cuboidal epithelial cell | 5.28e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.72e-22 | 31 |
gastrointestinal system | 3.32e-22 | 47 |
mucosa | 5.85e-14 | 15 |
intestinal mucosa | 3.74e-12 | 13 |
wall of intestine | 3.74e-12 | 13 |
gastrointestinal system mucosa | 3.74e-12 | 13 |
pancreas | 1.31e-10 | 12 |
digestive system | 2.16e-09 | 116 |
digestive tract | 2.16e-09 | 116 |
primitive gut | 2.16e-09 | 116 |
endoderm-derived structure | 5.88e-09 | 118 |
endoderm | 5.88e-09 | 118 |
presumptive endoderm | 5.88e-09 | 118 |
subdivision of digestive tract | 2.29e-08 | 114 |
epithelium of mucosa | 2.80e-08 | 9 |
gastrointestinal system epithelium | 2.80e-08 | 9 |
intestinal epithelium | 2.80e-08 | 9 |
simple columnar epithelium | 1.40e-07 | 11 |
organ component layer | 1.86e-07 | 24 |
adult organism | 4.68e-07 | 51 |