FFCP PHASE1:Mm9::chr11:100334086..100334102,-: Difference between revisions
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{{FFCP|EntrezGene=217194|HGNC=|MCL_coexpression_id=1520|UniProt=Q14DU1,Q8CE33|association_with_transcript=0bp_to_NM_172565,uc007llj.1_5end|description=CAGE_peak_1_at_Klhl11_5end|id=chr11:100334086..100334102,-|ontology_enrichment_celltype=CL:0000540!1.67e-12!33;CL:0000047!1.67e-12!33;CL:0000031!1.67e-12!33;CL:0000404!1.67e-12!33;CL:0000393!3.69e-12!39;CL:0000211!3.69e-12!39;CL:0000117!3.49e-10!23;CL:0000337!3.49e-10!23;CL:0000221!6.77e-08!44;CL:0000133!6.77e-08!44;CL:0002321!8.74e-08!70;CL:0000220!8.74e-08!70;CL:0002319!1.38e-07!43;CL:0000055!4.55e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.67e-12,33;CL:0000047,1.67e-12,33;CL:0000031,1.67e-12,33;CL:0000404,1.67e-12,33;CL:0000393,3.69e-12,39;CL:0000211,3.69e-12,39;CL:0000117,3.49e-10,23;CL:0000337,3.49e-10,23;CL:0000221,6.77e-08,44;CL:0000133,6.77e-08,44;CL:0002321,8.74e-08,70;CL:0002319,1.38e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.63e-19!73;UBERON:0005743!5.63e-19!73;UBERON:0000073!3.62e-18!75;UBERON:0001016!3.62e-18!75;UBERON:0004121!4.93e-18!102;UBERON:0000924!4.93e-18!102;UBERON:0006601!4.93e-18!102;UBERON:0002346!2.47e-16!71;UBERON:0003075!2.47e-16!71;UBERON:0007284!2.47e-16!71;UBERON:0001049!1.34e-14!52;UBERON:0005068!1.34e-14!52;UBERON:0006241!1.34e-14!52;UBERON:0007135!1.34e-14!52;UBERON:0000955!1.74e-14!50;UBERON:0006238!1.74e-14!50;UBERON:0000033!1.87e-14!63;UBERON:0000153!4.74e-14!94;UBERON:0002616!5.88e-14!49;UBERON:0007811!2.02e-13!86;UBERON:0002020!1.51e-12!34;UBERON:0003056!2.32e-11!49;UBERON:0003080!5.49e-11!40;UBERON:0002791!1.09e-10!29;UBERON:0003528!1.09e-10!29;UBERON:0001893!1.09e-10!29;UBERON:0002780!2.06e-10!39;UBERON:0001890!2.06e-10!39;UBERON:0006240!2.06e-10!39;UBERON:0000956!2.08e-07!21;UBERON:0001869!2.08e-07!21;UBERON:0000203!2.08e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.63e-19,73;UBERON:0001016,3.62e-18,75;UBERON:0004121,6.39e-17,95;UBERON:0000924,6.39e-17,95;UBERON:0006601,6.39e-17,95;UBERON:0000073,6.39e-16,54;UBERON:0002346,1.79e-15,64;UBERON:0003075,1.79e-15,64;UBERON:0007284,1.79e-15,64;UBERON:0010371,3.40e-15,73;UBERON:0001049,1.34e-14,52;UBERON:0005068,1.34e-14,52;UBERON:0006241,1.34e-14,52;UBERON:0007135,1.34e-14,52;UBERON:0000955,1.38e-12,47;UBERON:0006238,1.38e-12,47;UBERON:0002020,1.51e-12,34;UBERON:0002616,4.47e-12,46;UBERON:0003056,2.32e-11,49;UBERON:0003080,5.49e-11,40;UBERON:0003528,1.09e-10,29;UBERON:0002791,1.09e-10,29;UBERON:0001893,1.09e-10,29;UBERON:0002780,2.06e-10,39;UBERON:0001890,2.06e-10,39;UBERON:0006240,2.06e-10,39;UBERON:0010314,2.20e-08,92;UBERON:0000956,2.08e-07,21;UBERON:0001869,2.08e-07,21;UBERON:0000203,2.08e-07,21|phase1_expression=13.4525031568027,4.53668029931169,6.3699893514535,15.1232105653415,14.5259761684441,6.71517087647559,4.20502753071946,5.29405626110463,19.42884365693,22.4701945269114,3.93801326918661,6.30200056063158,5.30722262786738,5.94458736449182,3.99731714178795,5.06188168474565,2.09868563438444,4.10100814965709,2.87940310572051,5.51706547337439,14.1171861650776,4.76596565764249,4.17919662622297,1.75991665072747,2.75291137280604,5.16808767703518,3.87685796543167,4.74036711908956,2.47030445293286,3.2763916868791,1.99557459589774,4.44521471421742,6.76571266343027,0,3.75507105676657,5.98444723290572,7.14592746918292,9.20769587621197,3.1253413780952,8.89990364755457,10.5881667845583,9.56263678941824,4.85510353031154,8.93867407626599,9.7321853970734,8.07605709511399,3.9119567217402,4.57852828398938,2.63623419281366,6.22175677037707,4.05960622713551,5.75010257459886,5.70460860596304,9.42970784614748,11.0910953717013,5.40244815675489,3.15186783932632,9.7977697532714,8.9019242778223,14.2827564403449,14.5781222806421,3.38844532069132,1.77858959222228,0.449949858640699,0,2.8419204597844,4.19440154725767,2.68952813725088,12.9612015385597,11.0704869431986,10.9368979902719,8.56952953211411,9.27647871996777,11.2691535277758,11.6931474642248,6.43453150627015,45.1475112097494,36.9016407066192,36.8655679814984,10.0233578674947,11.2529801630964,7.8137005583514,28.7558488971422,25.8870800614573,24.90611438762,22.9810296669461,16.3727432918968,12.4887628702951,4.39211921332468,4.98772296704784,13.9134954576805,1.72084775396277,10.1995700056163,2.15881276655127,3.24888208723835,5.82434953226536,6.17955448579708,3.2381761289831,3.11743205523443,2.82671659608272,11.2674735821344,8.98285341900225,10.1922095882658,14.2213340630666,3.24736561516821,5.06719730950197,7.58286667522175,5.02409070763864,2.84831672011889,19.7428044956217,6.24547176358089,4.87144765299426,5.76538743140146,7.23468674652588,8.11362079236363,16.2109902815281,4.44950941921873,5.35017620603673,5.30766331169925,2.75003644910596,4.19598885074748,3.87900202508178,3.72783522436244,19.0307518057506,13.823482649688,2.29911349687732,6.82946209683746,3.59941638596045,6.22644112658017,26.3631525352488,17.3850229071078,10.9319286338192,16.339486098074,14.5757810678288,23.8956251243494,23.2005006186893,4.9901288286655,5.47390670684409,10.867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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217194 | |||
|HGNC= | |||
|MCL_coexpression_id=1520 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q14DU1,uniprot:Q8CE33 | |||
|association_with_transcript=0bp_to_NM_172565,uc007llj.1_5end | |||
|cluster_id=chr11:100334086..100334102,- | |||
|description=CAGE_peak_1_at_Klhl11_5end | |||
|id=chr11:100334086..100334102,- | |||
|ontology_enrichment_celltype=CL:0000540!1.67e-12!33;CL:0000047!1.67e-12!33;CL:0000031!1.67e-12!33;CL:0000404!1.67e-12!33;CL:0000393!3.69e-12!39;CL:0000211!3.69e-12!39;CL:0000117!3.49e-10!23;CL:0000337!3.49e-10!23;CL:0000221!6.77e-08!44;CL:0000133!6.77e-08!44;CL:0002321!8.74e-08!70;CL:0000220!8.74e-08!70;CL:0002319!1.38e-07!43;CL:0000055!4.55e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.67e-12,33;CL:0000047,1.67e-12,33;CL:0000031,1.67e-12,33;CL:0000404,1.67e-12,33;CL:0000393,3.69e-12,39;CL:0000211,3.69e-12,39;CL:0000117,3.49e-10,23;CL:0000337,3.49e-10,23;CL:0000221,6.77e-08,44;CL:0000133,6.77e-08,44;CL:0002321,8.74e-08,70;CL:0002319,1.38e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.63e-19!73;UBERON:0005743!5.63e-19!73;UBERON:0000073!3.62e-18!75;UBERON:0001016!3.62e-18!75;UBERON:0004121!4.93e-18!102;UBERON:0000924!4.93e-18!102;UBERON:0006601!4.93e-18!102;UBERON:0002346!2.47e-16!71;UBERON:0003075!2.47e-16!71;UBERON:0007284!2.47e-16!71;UBERON:0001049!1.34e-14!52;UBERON:0005068!1.34e-14!52;UBERON:0006241!1.34e-14!52;UBERON:0007135!1.34e-14!52;UBERON:0000955!1.74e-14!50;UBERON:0006238!1.74e-14!50;UBERON:0000033!1.87e-14!63;UBERON:0000153!4.74e-14!94;UBERON:0002616!5.88e-14!49;UBERON:0007811!2.02e-13!86;UBERON:0002020!1.51e-12!34;UBERON:0003056!2.32e-11!49;UBERON:0003080!5.49e-11!40;UBERON:0002791!1.09e-10!29;UBERON:0003528!1.09e-10!29;UBERON:0001893!1.09e-10!29;UBERON:0002780!2.06e-10!39;UBERON:0001890!2.06e-10!39;UBERON:0006240!2.06e-10!39;UBERON:0000956!2.08e-07!21;UBERON:0001869!2.08e-07!21;UBERON:0000203!2.08e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.63e-19,73;UBERON:0001016,3.62e-18,75;UBERON:0004121,6.39e-17,95;UBERON:0000924,6.39e-17,95;UBERON:0006601,6.39e-17,95;UBERON:0000073,6.39e-16,54;UBERON:0002346,1.79e-15,64;UBERON:0003075,1.79e-15,64;UBERON:0007284,1.79e-15,64;UBERON:0010371,3.40e-15,73;UBERON:0001049,1.34e-14,52;UBERON:0005068,1.34e-14,52;UBERON:0006241,1.34e-14,52;UBERON:0007135,1.34e-14,52;UBERON:0000955,1.38e-12,47;UBERON:0006238,1.38e-12,47;UBERON:0002020,1.51e-12,34;UBERON:0002616,4.47e-12,46;UBERON:0003056,2.32e-11,49;UBERON:0003080,5.49e-11,40;UBERON:0003528,1.09e-10,29;UBERON:0002791,1.09e-10,29;UBERON:0001893,1.09e-10,29;UBERON:0002780,2.06e-10,39;UBERON:0001890,2.06e-10,39;UBERON:0006240,2.06e-10,39;UBERON:0010314,2.20e-08,92;UBERON:0000956,2.08e-07,21;UBERON:0001869,2.08e-07,21;UBERON:0000203,2.08e-07,21 | |||
|phase1_expression=13.4525031568027,4.53668029931169,6.3699893514535,15.1232105653415,14.5259761684441,6.71517087647559,4.20502753071946,5.29405626110463,19.42884365693,22.4701945269114,3.93801326918661,6.30200056063158,5.30722262786738,5.94458736449182,3.99731714178795,5.06188168474565,2.09868563438444,4.10100814965709,2.87940310572051,5.51706547337439,14.1171861650776,4.76596565764249,4.17919662622297,1.75991665072747,2.75291137280604,5.16808767703518,3.87685796543167,4.74036711908956,2.47030445293286,3.2763916868791,1.99557459589774,4.44521471421742,6.76571266343027,0,3.75507105676657,5.98444723290572,7.14592746918292,9.20769587621197,3.1253413780952,8.89990364755457,10.5881667845583,9.56263678941824,4.85510353031154,8.93867407626599,9.7321853970734,8.07605709511399,3.9119567217402,4.57852828398938,2.63623419281366,6.22175677037707,4.05960622713551,5.75010257459886,5.70460860596304,9.42970784614748,11.0910953717013,5.40244815675489,3.15186783932632,9.7977697532714,8.9019242778223,14.2827564403449,14.5781222806421,3.38844532069132,1.77858959222228,0.449949858640699,0,2.8419204597844,4.19440154725767,2.68952813725088,12.9612015385597,11.0704869431986,10.9368979902719,8.56952953211411,9.27647871996777,11.2691535277758,11.6931474642248,6.43453150627015,45.1475112097494,36.9016407066192,36.8655679814984,10.0233578674947,11.2529801630964,7.8137005583514,28.7558488971422,25.8870800614573,24.90611438762,22.9810296669461,16.3727432918968,12.4887628702951,4.39211921332468,4.98772296704784,13.9134954576805,1.72084775396277,10.1995700056163,2.15881276655127,3.24888208723835,5.82434953226536,6.17955448579708,3.2381761289831,3.11743205523443,2.82671659608272,11.2674735821344,8.98285341900225,10.1922095882658,14.2213340630666,3.24736561516821,5.06719730950197,7.58286667522175,5.02409070763864,2.84831672011889,19.7428044956217,6.24547176358089,4.87144765299426,5.76538743140146,7.23468674652588,8.11362079236363,16.2109902815281,4.44950941921873,5.35017620603673,5.30766331169925,2.75003644910596,4.19598885074748,3.87900202508178,3.72783522436244,19.0307518057506,13.823482649688,2.29911349687732,6.82946209683746,3.59941638596045,6.22644112658017,26.3631525352488,17.3850229071078,10.9319286338192,16.339486098074,14.5757810678288,23.8956251243494,23.2005006186893,4.9901288286655,5.47390670684409,10.867078612648,6.52369753248069,5.59517904739626,9.19608417733892,6.48223667299257,5.87748789559289,7.89223390155403,6.79002717509704,9.46387418053261,6.46758426847539,8.191583731448,8.50977360755187,8.62160508403349,6.57587197282724,7.50727572909114,8.00979983000983,7.61393904709391,6.36909653819178,2.80885274925294,6.43369767786788,3.12579849335152,2.89976081549703,2.57978665979206,4.50155153652537,3.55117103377815,2.36117078096885,3.5481435964097,3.25547522650571,3.21928081679543,2.10177616260905,2.63295759861569,3.11918181750281,4.78305976320549,4.38599962275997,3.51280184465681,3.89198614405078,20.8187049078486,8.84979666461846,1.98251269790279,3.70230793328962,4.69234151177515,5.57368012465052,5.28356591420583,4.84040459096022,6.0042071838115,4.37518940058886,6.64340686162316,3.29397909448022,4.52403375840485,3.38226002469956,3.31438948102504,4.49409704327111,3.24207074812041,3.18626037206988,4.55202962287396,5.25543158004753,3.38123207019241,3.66572390121566,3.68509725618489,5.33032231166421,4.23684798732524,4.42830443938806,3.45397201251025,5.05928372079382,7.41131567717872,5.33904338291501,2.75182593158484,2.47348323623339,3.44862206360455,1.92941727801933,3.31013607315846,4.31544206176216,2.10775794807546,1.64736847912849,2.87536413054709,2.23284568601102,1.5601883655728,2.77836765741823,2.69096120282868,4.3419916922703,6.65111484599777,6.253216588426,6.35563408123901,5.09235257325564,5.63256595892405,7.03526281255626,6.18913466303636,6.43941037930736,5.35959489961049,4.87222317227305,7.01600982092943,6.06294264448231,5.35323443784276,5.49666422609744,9.04747703635634,2.17562273527484,7.37646409528554,4.69092468718045,32.9128709474974,28.4824398419054,10.1639666133539,2.01976741763498,5.67914794949262,8.19921363022941,11.6328634775711,9.31978312014953,10.0259403337077,8.20921939287614,12.9539424535966,9.35218745316198,13.4397844501818,17.9939937196212,12.6326675835359,5.1639025063504,9.28455668315384,7.4236555337641,2.65490276679926,4.12727081463468,4.23252979750651,2.45186603682668,4.13422650033082,4.30409207121498,4.13485269069154,4.72593848320757,3.92147116223193,9.48110273807448,6.32511651449993,4.12542172992747,12.9367050186439,3.24109969256358,4.39819524861365,7.93047029616891,6.38424841112185,11.5939731441346,7.40470592709544,3.04464949114599,6.10146440965647,6.35496212591461,9.92377791247329,3.62749756471256,5.16686165426898,6.33285711745637,6.68485126417564,6.40149509005739,3.78925087618806,32.6348531538497,2.9048049735635,7.84270098260245,5.18544676635193,3.20226376907975,3.55404992074665,3.43167259809784,4.41943917984024,9.6566502103324,6.90999869022119,4.77335309007557,6.95939185878498,4.06638934253697,5.184256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| |||
|short_description=p1@Klhl11 | |||
}} |
Revision as of 03:19, 5 August 2015
Short description: | p1@Klhl11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Klhl11_5end |
Coexpression cluster: | MCL_coexpression_mm9:1520 |
Association with transcript: | 0bp_to_NM_172565, uc007llj.1_5end |
EntrezGene: | 217194 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.67e-12 | 33 |
neuronal stem cell | 1.67e-12 | 33 |
neuroblast | 1.67e-12 | 33 |
electrically signaling cell | 1.67e-12 | 33 |
electrically responsive cell | 3.69e-12 | 39 |
electrically active cell | 3.69e-12 | 39 |
CNS neuron (sensu Vertebrata) | 3.49e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.49e-10 | 23 |
ectodermal cell | 6.77e-08 | 44 |
neurectodermal cell | 6.77e-08 | 44 |
embryonic cell | 8.74e-08 | 70 |
neural cell | 1.38e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.63e-19 | 73 |
nervous system | 3.62e-18 | 75 |
ectoderm-derived structure | 6.39e-17 | 95 |
ectoderm | 6.39e-17 | 95 |
presumptive ectoderm | 6.39e-17 | 95 |
regional part of nervous system | 6.39e-16 | 54 |
neurectoderm | 1.79e-15 | 64 |
neural plate | 1.79e-15 | 64 |
presumptive neural plate | 1.79e-15 | 64 |
ecto-epithelium | 3.40e-15 | 73 |
neural tube | 1.34e-14 | 52 |
neural rod | 1.34e-14 | 52 |
future spinal cord | 1.34e-14 | 52 |
neural keel | 1.34e-14 | 52 |
brain | 1.38e-12 | 47 |
future brain | 1.38e-12 | 47 |
gray matter | 1.51e-12 | 34 |
regional part of brain | 4.47e-12 | 46 |
pre-chordal neural plate | 2.32e-11 | 49 |
anterior neural tube | 5.49e-11 | 40 |
brain grey matter | 1.09e-10 | 29 |
regional part of telencephalon | 1.09e-10 | 29 |
telencephalon | 1.09e-10 | 29 |
regional part of forebrain | 2.06e-10 | 39 |
forebrain | 2.06e-10 | 39 |
future forebrain | 2.06e-10 | 39 |
structure with developmental contribution from neural crest | 2.20e-08 | 92 |
cerebral cortex | 2.08e-07 | 21 |
cerebral hemisphere | 2.08e-07 | 21 |
pallium | 2.08e-07 | 21 |