FFCP PHASE1:Mm9::chr2:35960327..35960338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:35960327..35960338,- | |||
|description=CAGE_peak_at_chr2:35960327..35960338,- | |description=CAGE_peak_at_chr2:35960327..35960338,- | ||
|id=chr2:35960327..35960338,- | |id=chr2:35960327..35960338,- | ||
|ontology_enrichment_celltype=CL:0002609!4.87e-13!6;CL:0002608!1.93e-07!3 | |ontology_enrichment_celltype=CL:0002609!4.87e-13!6;CL:0002608!1.93e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.34e-60,6;CL:0002608,1.66e-44,3;CL:0000117,3.15e-16,23;CL:0000337,3.15e-16,23;CL:0000540,1.86e-11,33;CL:0000047,1.86e-11,33;CL:0000031,1.86e-11,33;CL:0000404,1.86e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.89e-09,43;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!2.16e-14!21;UBERON:0001869!2.16e-14!21;UBERON:0000203!2.16e-14!21;UBERON:0002791!3.91e-11!29;UBERON:0003528!3.91e-11!29;UBERON:0001893!3.91e-11!29;UBERON:0002020!5.93e-09!34;UBERON:0002780!1.53e-08!39;UBERON:0001890!1.53e-08!39;UBERON:0006240!1.53e-08!39;UBERON:0002619!1.60e-08!17;UBERON:0003080!3.12e-08!40 | |ontology_enrichment_uberon=UBERON:0000956!2.16e-14!21;UBERON:0001869!2.16e-14!21;UBERON:0000203!2.16e-14!21;UBERON:0002791!3.91e-11!29;UBERON:0003528!3.91e-11!29;UBERON:0001893!3.91e-11!29;UBERON:0002020!5.93e-09!34;UBERON:0002780!1.53e-08!39;UBERON:0001890!1.53e-08!39;UBERON:0006240!1.53e-08!39;UBERON:0002619!1.60e-08!17;UBERON:0003080!3.12e-08!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,6.28e-34,7;UBERON:0003022,6.28e-34,7;UBERON:0002421,6.28e-34,7;UBERON:0000349,6.28e-34,7;UBERON:0002600,6.28e-34,7;UBERON:0000956,3.00e-25,21;UBERON:0001869,3.00e-25,21;UBERON:0000203,3.00e-25,21;UBERON:0003528,1.94e-18,29;UBERON:0002791,1.94e-18,29;UBERON:0001893,1.94e-18,29;UBERON:0002020,8.43e-16,34;UBERON:0002619,2.20e-14,17;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55534418462716,1.35005938331691,0.841299845405528,0,0,2.57230678351403,2.1086003624012,4.5960939330501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.628271760564322,0.695297280769106,0.255715457330331,0,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,2.26390147234426,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.682934423016537,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.448176066834085,0.229741875822453,0,0.115884325944855,0,0.824171801606613,0,0,0.354951612318675,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0.749431733813838,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55534418462716,1.35005938331691,0.841299845405528,0,0,2.57230678351403,2.1086003624012,4.5960939330501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.628271760564322,0.695297280769106,0.255715457330331,0,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,2.26390147234426,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.682934423016537,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.448176066834085,0.229741875822453,0,0.115884325944855,0,0.824171801606613,0,0,0.354951612318675,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0.749431733813838,0,0,0,0,0 | ||
|short_description=p@chr2:35960327..35960338,- | |short_description=p@chr2:35960327..35960338,- | ||
}} | }} |
Latest revision as of 03:19, 5 August 2015
Short description: | p@chr2:35960327..35960338, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:35960327..35960338, - |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.34e-60 | 6 |
hippocampal neuron | 1.66e-44 | 3 |
CNS neuron (sensu Vertebrata) | 3.15e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.15e-16 | 23 |
neuron | 1.86e-11 | 33 |
neuronal stem cell | 1.86e-11 | 33 |
neuroblast | 1.86e-11 | 33 |
electrically signaling cell | 1.86e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.89e-09 | 43 |
ectodermal cell | 1.08e-08 | 44 |
neurectodermal cell | 1.08e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 6.28e-34 | 7 |
lobe parts of cerebral cortex | 6.28e-34 | 7 |
hippocampal formation | 6.28e-34 | 7 |
limbic system | 6.28e-34 | 7 |
limbic lobe | 6.28e-34 | 7 |
cerebral cortex | 3.00e-25 | 21 |
cerebral hemisphere | 3.00e-25 | 21 |
pallium | 3.00e-25 | 21 |
brain grey matter | 1.94e-18 | 29 |
regional part of telencephalon | 1.94e-18 | 29 |
telencephalon | 1.94e-18 | 29 |
gray matter | 8.43e-16 | 34 |
regional part of cerebral cortex | 2.20e-14 | 17 |
regional part of forebrain | 7.80e-14 | 39 |
forebrain | 7.80e-14 | 39 |
future forebrain | 7.80e-14 | 39 |
anterior neural tube | 1.69e-13 | 40 |
regional part of brain | 8.56e-12 | 46 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
pre-chordal neural plate | 4.27e-11 | 49 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |