FFCP PHASE1:Mm9::chr1:165709766..165709836,+: Difference between revisions
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{{FFCP|EntrezGene=16579|HGNC=|MCL_coexpression_id=1|UniProt=P70188|association_with_transcript=0bp_to_NM_010629,uc007dho.1_5end|description=CAGE_peak_1_at_Kifap3_5end|id=chr1:165709766..165709836,+|ontology_enrichment_celltype=CL:0000117!2.29e-13!23;CL:0000337!2.29e-13!23;CL:0000540!8.49e-10!33;CL:0000047!8.49e-10!33;CL:0000031!8.49e-10!33;CL:0000404!8.49e-10!33;CL:0000393!1.69e-09!39;CL:0000211!1.69e-09!39;CL:0002319!5.39e-08!43;CL:0000221!7.09e-08!44;CL:0000133!7.09e-08!44;CL:0000055!1.53e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-13,23;CL:0000337,2.28e-13,23;CL:0000540,8.47e-10,33;CL:0000047,8.47e-10,33;CL:0000031,8.47e-10,33;CL:0000404,8.47e-10,33;CL:0000393,1.69e-09,39;CL:0000211,1.69e-09,39;CL:0002319,5.38e-08,43;CL:0000221,7.08e-08,44;CL:0000133,7.08e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.82e-23!73;UBERON:0005743!7.82e-23!73;UBERON:0001049!1.22e-22!52;UBERON:0005068!1.22e-22!52;UBERON:0006241!1.22e-22!52;UBERON:0007135!1.22e-22!52;UBERON:0000073!1.79e-22!75;UBERON:0001016!1.79e-22!75;UBERON:0000033!1.41e-21!63;UBERON:0000955!1.62e-21!50;UBERON:0006238!1.62e-21!50;UBERON:0002616!5.70e-21!49;UBERON:0002346!8.02e-20!71;UBERON:0003075!8.02e-20!71;UBERON:0007284!8.02e-20!71;UBERON:0004121!1.30e-19!102;UBERON:0000924!1.30e-19!102;UBERON:0006601!1.30e-19!102;UBERON:0003056!3.76e-19!49;UBERON:0002020!9.76e-19!34;UBERON:0003080!8.87e-18!40;UBERON:0002780!3.68e-17!39;UBERON:0001890!3.68e-17!39;UBERON:0006240!3.68e-17!39;UBERON:0002791!9.90e-16!29;UBERON:0003528!9.90e-16!29;UBERON:0001893!9.90e-16!29;UBERON:0000153!4.58e-12!94;UBERON:0000956!3.52e-11!21;UBERON:0001869!3.52e-11!21;UBERON:0000203!3.52e-11!21;UBERON:0007811!4.38e-11!86;UBERON:0002619!2.90e-09!17;UBERON:0000025!8.70e-09!114;UBERON:0004111!3.82e-08!122;UBERON:0000468!6.65e-08!333;UBERON:0002021!1.08e-07!10;UBERON:0000411!1.08e-07!10;UBERON:0001950!1.08e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.82e-24,54;UBERON:0001017,7.79e-23,73;UBERON:0002346,1.15e-22,64;UBERON:0003075,1.15e-22,64;UBERON:0007284,1.15e-22,64;UBERON:0001049,1.21e-22,52;UBERON:0005068,1.21e-22,52;UBERON:0006241,1.21e-22,52;UBERON:0007135,1.21e-22,52;UBERON:0001016,1.79e-22,75;UBERON:0004121,1.43e-21,95;UBERON:0000924,1.43e-21,95;UBERON:0006601,1.43e-21,95;UBERON:0010371,1.85e-20,73;UBERON:0000955,1.89e-19,47;UBERON:0006238,1.89e-19,47;UBERON:0003056,3.75e-19,49;UBERON:0002616,6.49e-19,46;UBERON:0002020,9.73e-19,34;UBERON:0010314,7.61e-18,92;UBERON:0003080,8.84e-18,40;UBERON:0002780,3.67e-17,39;UBERON:0001890,3.67e-17,39;UBERON:0006240,3.67e-17,39;UBERON:0003528,9.87e-16,29;UBERON:0002791,9.87e-16,29;UBERON:0001893,9.87e-16,29;UBERON:0000956,3.51e-11,21;UBERON:0001869,3.51e-11,21;UBERON:0000203,3.51e-11,21;UBERON:0002619,2.90e-09,17;UBERON:0000025,8.46e-09,114;UBERON:0004111,3.72e-08,122;UBERON:0002021,1.08e-07,10;UBERON:0000411,1.08e-07,10;UBERON:0001950,1.08e-07,10;UBERON:0000922,7.81e-07,320|phase1_expression=13.1322054625931,1.04692622291808,0.909998478779072,0.30246421130683,1.50268718983904,2.01455126294268,2.33612640595526,1.42035655785734,0.140788722151667,0,0,0.239316476986009,1.36960583944965,1.39872643870396,1.66554880907831,1.01237633694913,1.39912375625629,1.57731082679119,0.411343300817216,1.69755860719212,19.9001298953503,2.18440092641948,1.56719873483361,1.11994695955385,1.37645568640302,1.14846392823004,1.7230479846363,1.939241094173,1.71021077510736,3.78045194639896,1.33038306393183,1.27006134691926,0,0,5.19932915552294,2.65975432573588,1.42918549383658,0,0,0.523523743973798,0.588231488031014,0,0,14.1004436132647,15.7134243390248,18.9053154726532,7.04152209913235,9.59310688073965,10.1055644057857,15.1655321277941,13.5786828976602,12.9377307928474,0.838913030288682,2.17608642603403,1.00828139742739,8.48956138918625,12.8940047972441,10.3134418455488,51.793013980057,40.2033144246745,43.1005354384202,11.1818695582814,15.1180115338894,2.2497492932035,0.988866362566974,1.4209602298922,5.99200221036809,11.5265491596466,37.7430188802859,35.776573657898,30.7074443573018,53.1310830991075,42.848496944613,43.4842337213087,36.1337425738751,26.6573448116906,57.2602581196821,87.9765759406943,85.7124455569839,53.2820602429983,56.9053143206988,61.4677777256977,58.3492467912886,50.0858722928195,65.7032465440283,62.1666315349439,72.0400704843461,71.7637866427407,8.63278603998298,14.5097395405028,13.3337664802772,4.30211938490693,0,3.77792234146472,5.19821133958135,4.48026887097336,10.5333315098814,14.3161470965569,11.950156211732,9.18682893726885,11.4083170019111,30.7983545794363,28.028576367731,35.5533351576666,3.89683873820185,4.30711771307668,6.0662933401774,9.1347103775248,7.50919862576798,9.64873903921361,11.1030609130327,9.13396434936424,8.30215790121811,10.0984169170257,7.87844337809222,8.16832843642891,7.91023896749996,12.8693427658721,1.76922110389975,13.9119490954772,10.6003928860989,5.33362778448744,0,53.5788858531131,43.5649150171987,3.0654846625031,2.87556298814209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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16579 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P70188 | |||
|association_with_transcript=0bp_to_NM_010629,uc007dho.1_5end | |||
|cluster_id=chr1:165709766..165709836,+ | |||
|description=CAGE_peak_1_at_Kifap3_5end | |||
|id=chr1:165709766..165709836,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.29e-13!23;CL:0000337!2.29e-13!23;CL:0000540!8.49e-10!33;CL:0000047!8.49e-10!33;CL:0000031!8.49e-10!33;CL:0000404!8.49e-10!33;CL:0000393!1.69e-09!39;CL:0000211!1.69e-09!39;CL:0002319!5.39e-08!43;CL:0000221!7.09e-08!44;CL:0000133!7.09e-08!44;CL:0000055!1.53e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-13,23;CL:0000337,2.28e-13,23;CL:0000540,8.47e-10,33;CL:0000047,8.47e-10,33;CL:0000031,8.47e-10,33;CL:0000404,8.47e-10,33;CL:0000393,1.69e-09,39;CL:0000211,1.69e-09,39;CL:0002319,5.38e-08,43;CL:0000221,7.08e-08,44;CL:0000133,7.08e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.82e-23!73;UBERON:0005743!7.82e-23!73;UBERON:0001049!1.22e-22!52;UBERON:0005068!1.22e-22!52;UBERON:0006241!1.22e-22!52;UBERON:0007135!1.22e-22!52;UBERON:0000073!1.79e-22!75;UBERON:0001016!1.79e-22!75;UBERON:0000033!1.41e-21!63;UBERON:0000955!1.62e-21!50;UBERON:0006238!1.62e-21!50;UBERON:0002616!5.70e-21!49;UBERON:0002346!8.02e-20!71;UBERON:0003075!8.02e-20!71;UBERON:0007284!8.02e-20!71;UBERON:0004121!1.30e-19!102;UBERON:0000924!1.30e-19!102;UBERON:0006601!1.30e-19!102;UBERON:0003056!3.76e-19!49;UBERON:0002020!9.76e-19!34;UBERON:0003080!8.87e-18!40;UBERON:0002780!3.68e-17!39;UBERON:0001890!3.68e-17!39;UBERON:0006240!3.68e-17!39;UBERON:0002791!9.90e-16!29;UBERON:0003528!9.90e-16!29;UBERON:0001893!9.90e-16!29;UBERON:0000153!4.58e-12!94;UBERON:0000956!3.52e-11!21;UBERON:0001869!3.52e-11!21;UBERON:0000203!3.52e-11!21;UBERON:0007811!4.38e-11!86;UBERON:0002619!2.90e-09!17;UBERON:0000025!8.70e-09!114;UBERON:0004111!3.82e-08!122;UBERON:0000468!6.65e-08!333;UBERON:0002021!1.08e-07!10;UBERON:0000411!1.08e-07!10;UBERON:0001950!1.08e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.82e-24,54;UBERON:0001017,7.79e-23,73;UBERON:0002346,1.15e-22,64;UBERON:0003075,1.15e-22,64;UBERON:0007284,1.15e-22,64;UBERON:0001049,1.21e-22,52;UBERON:0005068,1.21e-22,52;UBERON:0006241,1.21e-22,52;UBERON:0007135,1.21e-22,52;UBERON:0001016,1.79e-22,75;UBERON:0004121,1.43e-21,95;UBERON:0000924,1.43e-21,95;UBERON:0006601,1.43e-21,95;UBERON:0010371,1.85e-20,73;UBERON:0000955,1.89e-19,47;UBERON:0006238,1.89e-19,47;UBERON:0003056,3.75e-19,49;UBERON:0002616,6.49e-19,46;UBERON:0002020,9.73e-19,34;UBERON:0010314,7.61e-18,92;UBERON:0003080,8.84e-18,40;UBERON:0002780,3.67e-17,39;UBERON:0001890,3.67e-17,39;UBERON:0006240,3.67e-17,39;UBERON:0003528,9.87e-16,29;UBERON:0002791,9.87e-16,29;UBERON:0001893,9.87e-16,29;UBERON:0000956,3.51e-11,21;UBERON:0001869,3.51e-11,21;UBERON:0000203,3.51e-11,21;UBERON:0002619,2.90e-09,17;UBERON:0000025,8.46e-09,114;UBERON:0004111,3.72e-08,122;UBERON:0002021,1.08e-07,10;UBERON:0000411,1.08e-07,10;UBERON:0001950,1.08e-07,10;UBERON:0000922,7.81e-07,320 | |||
|phase1_expression=13.1322054625931,1.04692622291808,0.909998478779072,0.30246421130683,1.50268718983904,2.01455126294268,2.33612640595526,1.42035655785734,0.140788722151667,0,0,0.239316476986009,1.36960583944965,1.39872643870396,1.66554880907831,1.01237633694913,1.39912375625629,1.57731082679119,0.411343300817216,1.69755860719212,19.9001298953503,2.18440092641948,1.56719873483361,1.11994695955385,1.37645568640302,1.14846392823004,1.7230479846363,1.939241094173,1.71021077510736,3.78045194639896,1.33038306393183,1.27006134691926,0,0,5.19932915552294,2.65975432573588,1.42918549383658,0,0,0.523523743973798,0.588231488031014,0,0,14.1004436132647,15.7134243390248,18.9053154726532,7.04152209913235,9.59310688073965,10.1055644057857,15.1655321277941,13.5786828976602,12.9377307928474,0.838913030288682,2.17608642603403,1.00828139742739,8.48956138918625,12.8940047972441,10.3134418455488,51.793013980057,40.2033144246745,43.1005354384202,11.1818695582814,15.1180115338894,2.2497492932035,0.988866362566974,1.4209602298922,5.99200221036809,11.5265491596466,37.7430188802859,35.776573657898,30.7074443573018,53.1310830991075,42.848496944613,43.4842337213087,36.1337425738751,26.6573448116906,57.2602581196821,87.9765759406943,85.7124455569839,53.2820602429983,56.9053143206988,61.4677777256977,58.3492467912886,50.0858722928195,65.7032465440283,62.1666315349439,72.0400704843461,71.7637866427407,8.63278603998298,14.5097395405028,13.3337664802772,4.30211938490693,0,3.77792234146472,5.19821133958135,4.48026887097336,10.5333315098814,14.3161470965569,11.950156211732,9.18682893726885,11.4083170019111,30.7983545794363,28.028576367731,35.5533351576666,3.89683873820185,4.30711771307668,6.0662933401774,9.1347103775248,7.50919862576798,9.64873903921361,11.1030609130327,9.13396434936424,8.30215790121811,10.0984169170257,7.87844337809222,8.16832843642891,7.91023896749996,12.8693427658721,1.76922110389975,13.9119490954772,10.6003928860989,5.33362778448744,0,53.5788858531131,43.5649150171987,3.0654846625031,2.87556298814209,3.59941638596045,3.30382590389968,64.2601843046689,52.612569324142,74.13606774659,69.0082551163338,81.8289463457058,60.2585329222724,69.2770193299325,19.1458004038595,7.83763914843586,6.57079171927554,10.7325346502102,14.8337304977482,13.3343220571414,16.7457780718975,17.3310540511072,20.0707672496417,22.0355598889942,26.2364828767241,17.3331258395141,12.5029435901048,19.2888201771176,20.9381837755099,16.2204841996405,18.6291656981151,11.8405736617537,16.4625709126355,15.325638545024,2.80885274925294,4.88961023517959,3.6941254921427,11.1847917169171,8.67746421930056,12.7844063637321,8.99629995223799,12.199382368339,14.1925743856388,13.0219009060228,14.2184902741798,10.5088808130453,10.6963902443762,12.3125598059321,14.4302480991623,16.0819986167866,11.1970558798436,14.7627060636409,53.2033569867242,48.2622632058844,2.97376904685418,2.3800550999719,12.3707185310436,15.3276203427889,13.5310834388198,6.45387278794696,5.78182913996663,7.22857379227725,5.21981967698963,5.10566759644434,5.27803938480566,5.76973768919337,5.8489226135736,8.08937467788799,5.18731319699266,3.98282546508734,7.2073802362171,11.6533482861923,9.01661885384643,15.0701982605533,9.69762435838129,12.2737684808057,15.492951595443,14.465794502001,17.4268587903926,12.7099078839455,3.55743152504579,4.33797274861845,4.32429789249047,1.57403478669398,2.63718157805054,3.37648023653384,2.5462585178142,3.74004978686054,1.45921704097532,1.92192989231657,2.87536413054709,4.09355042435354,3.43241440426017,4.54641980304801,3.76734568396016,3.85954817090694,12.5632169313291,15.9172785887207,12.0594082567099,12.3913912615887,10.3263709246941,19.2632196058088,12.6163129669587,12.4885534628991,14.5024332577696,9.08005227559977,16.1049316344062,11.4704320301017,10.0157289482219,9.83613598354279,3.01582567878545,3.26343410291226,3.44234991113325,6.07060841870411,56.9954594456661,71.7335521944283,21.1476079535911,14.895784705058,9.78075480190396,7.41833614163613,8.61693590931196,11.9484398976276,11.1399337041197,15.8522857241746,9.31064613852257,7.3063964477828,13.4397844501818,48.5195187796929,12.3487874131194,16.9162323483892,17.1031307321255,17.8167732810338,5.30980553359851,13.110154352369,9.37203026590728,10.1846743068185,10.335566250827,10.4527950300935,9.56184684722418,6.5436071305951,8.55593708123331,6.63677191665214,4.21674434299995,8.25084345985495,14.2984634416591,16.3855595568492,9.83125996748934,15.2179294872431,15.7832807941623,26.0418473699023,19.087686389846,13.3964577610424,8.21350978222986,10.1679394014634,8.38007912608855,12.366468970611,11.3025098687134,15.078231232039,12.6534684643325,12.3105674808796,5.53813589596716,60.0777978514051,1.87957968877638,13.8279201535359,5.74103034846106,1.88368457004691,1.77702496037333,2.74533807847827,4.9293744698218,5.59805809294632,3.45499934511059,3.81868247206045,14.5514557047322,15.2489600345137,14.0406943068342,15.0543573130417,11.1364907510551,11.4634694427098,8.34799902825893,6.80565449158477,5.31421390496351,4.3493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| |||
|short_description=p1@Kifap3 | |||
}} |
Revision as of 03:36, 5 August 2015
Short description: | p1@Kifap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kifap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_010629, uc007dho.1_5end |
EntrezGene: | 16579 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.28e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.28e-13 | 23 |
neuron | 8.47e-10 | 33 |
neuronal stem cell | 8.47e-10 | 33 |
neuroblast | 8.47e-10 | 33 |
electrically signaling cell | 8.47e-10 | 33 |
electrically responsive cell | 1.69e-09 | 39 |
electrically active cell | 1.69e-09 | 39 |
neural cell | 5.38e-08 | 43 |
ectodermal cell | 7.08e-08 | 44 |
neurectodermal cell | 7.08e-08 | 44 |