FFCP PHASE1:Mm9::chr9:4796160..4796195,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14802|HGNC=|MCL_coexpression_id=281|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069|association_with_transcript=38bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end|description=CAGE_peak_2_at_Gria4_5end|id=chr9:4796160..4796195,-|ontology_enrichment_celltype=CL:0000540!6.20e-17!33;CL:0000047!6.20e-17!33;CL:0000031!6.20e-17!33;CL:0000404!6.20e-17!33;CL:0000393!6.71e-16!39;CL:0000211!6.71e-16!39;CL:0000221!6.72e-11!44;CL:0000133!6.72e-11!44;CL:0000117!1.35e-10!23;CL:0000337!1.35e-10!23;CL:0002319!1.51e-10!43;CL:0000055!9.29e-10!50;CL:0000107!9.43e-08!9|ontology_enrichment_celltype_v019_2=CL:0000540,2.94e-19,33;CL:0000047,2.94e-19,33;CL:0000031,2.94e-19,33;CL:0000404,2.94e-19,33;CL:0000393,2.67e-18,39;CL:0000211,2.67e-18,39;CL:0000117,5.83e-12,23;CL:0000337,5.83e-12,23;CL:0000221,1.11e-11,44;CL:0000133,1.11e-11,44;CL:0002319,2.78e-11,43;CL:0000107,1.09e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.69e-28!102;UBERON:0000924!2.69e-28!102;UBERON:0006601!2.69e-28!102;UBERON:0001017!1.23e-26!73;UBERON:0005743!1.23e-26!73;UBERON:0000073!9.60e-26!75;UBERON:0001016!9.60e-26!75;UBERON:0002346!1.96e-25!71;UBERON:0003075!1.96e-25!71;UBERON:0007284!1.96e-25!71;UBERON:0000033!1.68e-20!63;UBERON:0001049!5.94e-19!52;UBERON:0005068!5.94e-19!52;UBERON:0006241!5.94e-19!52;UBERON:0007135!5.94e-19!52;UBERON:0000955!8.39e-18!50;UBERON:0006238!8.39e-18!50;UBERON:0002616!3.96e-17!49;UBERON:0003056!4.61e-17!49;UBERON:0002020!1.27e-14!34;UBERON:0003080!3.97e-14!40;UBERON:0002780!1.60e-13!39;UBERON:0001890!1.60e-13!39;UBERON:0006240!1.60e-13!39;UBERON:0002791!7.14e-12!29;UBERON:0003528!7.14e-12!29;UBERON:0001893!7.14e-12!29;UBERON:0000956!3.14e-08!21;UBERON:0001869!3.14e-08!21;UBERON:0000203!3.14e-08!21;UBERON:0002410!9.43e-08!9;UBERON:0000468!1.26e-07!333;UBERON:0007811!1.39e-07!86;UBERON:0002619!2.48e-07!17;UBERON:0002021!3.06e-07!10;UBERON:0000411!3.06e-07!10;UBERON:0001950!3.06e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.22e-28,73;UBERON:0004121,2.00e-27,95;UBERON:0000924,2.00e-27,95;UBERON:0006601,2.00e-27,95;UBERON:0001016,7.89e-27,75;UBERON:0002346,9.89e-26,64;UBERON:0003075,9.89e-26,64;UBERON:0007284,9.89e-26,64;UBERON:0010371,1.84e-23,73;UBERON:0000073,9.07e-21,54;UBERON:0001049,1.47e-19,52;UBERON:0005068,1.47e-19,52;UBERON:0006241,1.47e-19,52;UBERON:0007135,1.47e-19,52;UBERON:0003056,1.60e-17,49;UBERON:0010314,2.10e-16,92;UBERON:0002020,2.21e-16,34;UBERON:0000955,2.28e-16,47;UBERON:0006238,2.28e-16,47;UBERON:0002616,1.22e-15,46;UBERON:0003080,3.50e-14,40;UBERON:0002780,1.64e-13,39;UBERON:0001890,1.64e-13,39;UBERON:0006240,1.64e-13,39;UBERON:0003528,3.18e-13,29;UBERON:0002791,3.18e-13,29;UBERON:0001893,3.18e-13,29;UBERON:0000956,4.79e-09,21;UBERON:0001869,4.79e-09,21;UBERON:0000203,4.79e-09,21;UBERON:0002410,1.09e-08,9;UBERON:0002021,4.20e-08,10;UBERON:0000411,4.20e-08,10;UBERON:0001950,4.20e-08,10;UBERON:0002619,5.23e-08,17|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.04130793658544,3.30384153891027,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,1.14613375975503,1.54701627683233,5.46254444320914,7.93486468908049,3.80298842103708,0.338844532069132,0,0,0,0,0,0.768436610643109,2.69592992002042,2.29510095163874,3.57552434297349,11.1403883917483,14.5773237028065,6.1245399607477,3.92966431174769,3.67687514644008,18.7196997698961,19.1531007127782,18.279177457493,6.59431438650969,6.86157327018072,8.33461392890816,21.217907924105,8.4414391504752,12.071061574368,21.5078867395777,21.9252388430619,17.5215479075783,0.302904773332736,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,5.35204995151386,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,6.7659277438793,2.13125834818499,4.15107895060905,2.86373017049983,3.76283862834255,0.628332956648377,0,1.15679485535929,0,0.323533699894818,0,0.484875253135222,0,74.9518840349561,64.9284791121711,0.766371165625774,0,0,0,23.2175491077475,10.980014467647,5.02617408451458,20.8589184230732,25.8272611903634,17.2464076984435,18.9822277789276,4.58277137326423,0.124406970610093,0.252722758433675,2.73574412652416,1.17108398666433,3.90833577536904,5.94205028357652,6.17889753126432,6.87168641428411,7.94305065766069,5.99691037182265,5.69147415625834,0.431135985865684,0.567318240503458,0.703804496655795,0.219195732427575,1.11218899690239,0,0.411564272815887,2.7864797354589,0,0,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,7.36014819974445,7.71784592844633,0,0,1.70630600428187,3.48355007790658,2.57734922644187,1.00841762311671,1.77902435075896,1.52180500890047,0,0.494096864172033,1.25667604400135,0.994782360205754,0.58489226135736,0,0.216138049874694,0.199141273254367,3.41402221715547,6.28366819353509,5.63538678365402,6.51684249105006,8.92181440971078,6.38235961001899,7.46191138066236,1.91893192373483,1.255989822731,0.987177311374404,0.296452627087149,0.333690211432188,0,0.674586337154561,0,0,0.25462585178142,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0.325929952884052,0.678980343100753,0.704070744865506,0.335012514883631,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,22.3165320083031,25.2005126173237,0,0.504941854408746,59.00003703084,57.0040566673092,60.3185513651837,47.7937595905104,47.2333189054675,49.2553163572568,46.5532306926128,45.007402118342,55.7355766904598,43.6996990333658,0.283880170416537,4.09550888434687,3.4206261464251,4.45419332025846,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,1.06949213515416,0.632073515871632,0,0,8.85142974959849,1.26042765821917,0.646793418913773,0.857348140126369,2.6601035046341,5.70780216326626,5.75921572107423,0.913394847343798,0,0,0.882113592219848,1.97863503529776,1.77610869365496,0.72375509913787,1.43246812803764,0.984845398470368,0.874442509889552,28.370071207608,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,2.53068794864908,3.45643094115643,4.64422965533745,3.3454127362315,1.31017538247707,1.48350781023303,1.48776220305605,1.04702376793612,0.518459893167171,1.24267862617385,0,1.19613236835183,0.992750942742586,5.05573089694524,1.80823752868824,3.21016638432478,3.87278887530988,1.5624526181274,0.629156066554265,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89784391048286,0.563047426353546,2.19781949120718,0.428736758158132,0,22.5900737046827,16.5717085142584,22.9158205375759,9.79563139359019,23.9778881919725,25.6833925112498,19.5756525067224,20.7147753483141,24.9228324941313,25.3702552758392,0.830298780673413,3.19219898720825,2.39027048055788,2.67417388775123,2.72497111416377,1.47074806760011,2.889207461421,3.09052585858341,2.88827288632634,2.52697211763797,2.28131369901216,3.39527414494937,2.71560371662659,2.68905640100451,3.27382173046996,2.38146845641537,4.40360438590451,2.12200142510076,2.06042950401653,4.12156976376312,4.11443102862498,5.32427418478012,2.38436189947321,3.34296758254356,3.48204707536723,3.04612588410035,3.47563148458268,3.41990624869196,2.98769050460896,2.80571135828869,1.89816028998679,4.33419722452479,1.63692417267876,2.94379998253335,1.54325288784913,3.49734809113124,1.63752125911786,2.14871054048298,1.72159498861959,0.441182838239031,1.15933917810211|short_description=p2@Gria4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14802 | |||
|HGNC= | |||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E863,uniprot:Q9Z2W8,uniprot:E9PX01,uniprot:Q8C069 | |||
|association_with_transcript=38bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end | |||
|cluster_id=chr9:4796160..4796195,- | |||
|description=CAGE_peak_2_at_Gria4_5end | |||
|id=chr9:4796160..4796195,- | |||
|ontology_enrichment_celltype=CL:0000540!6.20e-17!33;CL:0000047!6.20e-17!33;CL:0000031!6.20e-17!33;CL:0000404!6.20e-17!33;CL:0000393!6.71e-16!39;CL:0000211!6.71e-16!39;CL:0000221!6.72e-11!44;CL:0000133!6.72e-11!44;CL:0000117!1.35e-10!23;CL:0000337!1.35e-10!23;CL:0002319!1.51e-10!43;CL:0000055!9.29e-10!50;CL:0000107!9.43e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.94e-19,33;CL:0000047,2.94e-19,33;CL:0000031,2.94e-19,33;CL:0000404,2.94e-19,33;CL:0000393,2.67e-18,39;CL:0000211,2.67e-18,39;CL:0000117,5.83e-12,23;CL:0000337,5.83e-12,23;CL:0000221,1.11e-11,44;CL:0000133,1.11e-11,44;CL:0002319,2.78e-11,43;CL:0000107,1.09e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.69e-28!102;UBERON:0000924!2.69e-28!102;UBERON:0006601!2.69e-28!102;UBERON:0001017!1.23e-26!73;UBERON:0005743!1.23e-26!73;UBERON:0000073!9.60e-26!75;UBERON:0001016!9.60e-26!75;UBERON:0002346!1.96e-25!71;UBERON:0003075!1.96e-25!71;UBERON:0007284!1.96e-25!71;UBERON:0000033!1.68e-20!63;UBERON:0001049!5.94e-19!52;UBERON:0005068!5.94e-19!52;UBERON:0006241!5.94e-19!52;UBERON:0007135!5.94e-19!52;UBERON:0000955!8.39e-18!50;UBERON:0006238!8.39e-18!50;UBERON:0002616!3.96e-17!49;UBERON:0003056!4.61e-17!49;UBERON:0002020!1.27e-14!34;UBERON:0003080!3.97e-14!40;UBERON:0002780!1.60e-13!39;UBERON:0001890!1.60e-13!39;UBERON:0006240!1.60e-13!39;UBERON:0002791!7.14e-12!29;UBERON:0003528!7.14e-12!29;UBERON:0001893!7.14e-12!29;UBERON:0000956!3.14e-08!21;UBERON:0001869!3.14e-08!21;UBERON:0000203!3.14e-08!21;UBERON:0002410!9.43e-08!9;UBERON:0000468!1.26e-07!333;UBERON:0007811!1.39e-07!86;UBERON:0002619!2.48e-07!17;UBERON:0002021!3.06e-07!10;UBERON:0000411!3.06e-07!10;UBERON:0001950!3.06e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.22e-28,73;UBERON:0004121,2.00e-27,95;UBERON:0000924,2.00e-27,95;UBERON:0006601,2.00e-27,95;UBERON:0001016,7.89e-27,75;UBERON:0002346,9.89e-26,64;UBERON:0003075,9.89e-26,64;UBERON:0007284,9.89e-26,64;UBERON:0010371,1.84e-23,73;UBERON:0000073,9.07e-21,54;UBERON:0001049,1.47e-19,52;UBERON:0005068,1.47e-19,52;UBERON:0006241,1.47e-19,52;UBERON:0007135,1.47e-19,52;UBERON:0003056,1.60e-17,49;UBERON:0010314,2.10e-16,92;UBERON:0002020,2.21e-16,34;UBERON:0000955,2.28e-16,47;UBERON:0006238,2.28e-16,47;UBERON:0002616,1.22e-15,46;UBERON:0003080,3.50e-14,40;UBERON:0002780,1.64e-13,39;UBERON:0001890,1.64e-13,39;UBERON:0006240,1.64e-13,39;UBERON:0003528,3.18e-13,29;UBERON:0002791,3.18e-13,29;UBERON:0001893,3.18e-13,29;UBERON:0000956,4.79e-09,21;UBERON:0001869,4.79e-09,21;UBERON:0000203,4.79e-09,21;UBERON:0002410,1.09e-08,9;UBERON:0002021,4.20e-08,10;UBERON:0000411,4.20e-08,10;UBERON:0001950,4.20e-08,10;UBERON:0002619,5.23e-08,17 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.04130793658544,3.30384153891027,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,1.14613375975503,1.54701627683233,5.46254444320914,7.93486468908049,3.80298842103708,0.338844532069132,0,0,0,0,0,0.768436610643109,2.69592992002042,2.29510095163874,3.57552434297349,11.1403883917483,14.5773237028065,6.1245399607477,3.92966431174769,3.67687514644008,18.7196997698961,19.1531007127782,18.279177457493,6.59431438650969,6.86157327018072,8.33461392890816,21.217907924105,8.4414391504752,12.071061574368,21.5078867395777,21.9252388430619,17.5215479075783,0.302904773332736,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,5.35204995151386,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,6.7659277438793,2.13125834818499,4.15107895060905,2.86373017049983,3.76283862834255,0.628332956648377,0,1.15679485535929,0,0.323533699894818,0,0.484875253135222,0,74.9518840349561,64.9284791121711,0.766371165625774,0,0,0,23.2175491077475,10.980014467647,5.02617408451458,20.8589184230732,25.8272611903634,17.2464076984435,18.9822277789276,4.58277137326423,0.124406970610093,0.252722758433675,2.73574412652416,1.17108398666433,3.90833577536904,5.94205028357652,6.17889753126432,6.87168641428411,7.94305065766069,5.99691037182265,5.69147415625834,0.431135985865684,0.567318240503458,0.703804496655795,0.219195732427575,1.11218899690239,0,0.411564272815887,2.7864797354589,0,0,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,7.36014819974445,7.71784592844633,0,0,1.70630600428187,3.48355007790658,2.57734922644187,1.00841762311671,1.77902435075896,1.52180500890047,0,0.494096864172033,1.25667604400135,0.994782360205754,0.58489226135736,0,0.216138049874694,0.199141273254367,3.41402221715547,6.28366819353509,5.63538678365402,6.51684249105006,8.92181440971078,6.38235961001899,7.46191138066236,1.91893192373483,1.255989822731,0.987177311374404,0.296452627087149,0.333690211432188,0,0.674586337154561,0,0,0.25462585178142,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0.325929952884052,0.678980343100753,0.704070744865506,0.335012514883631,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,22.3165320083031,25.2005126173237,0,0.504941854408746,59.00003703084,57.0040566673092,60.3185513651837,47.7937595905104,47.2333189054675,49.2553163572568,46.5532306926128,45.007402118342,55.7355766904598,43.6996990333658,0.283880170416537,4.09550888434687,3.4206261464251,4.45419332025846,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,1.06949213515416,0.632073515871632,0,0,8.85142974959849,1.26042765821917,0.646793418913773,0.857348140126369,2.6601035046341,5.70780216326626,5.75921572107423,0.913394847343798,0,0,0.882113592219848,1.97863503529776,1.77610869365496,0.72375509913787,1.43246812803764,0.984845398470368,0.874442509889552,28.370071207608,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,2.53068794864908,3.45643094115643,4.64422965533745,3.3454127362315,1.31017538247707,1.48350781023303,1.48776220305605,1.04702376793612,0.518459893167171,1.24267862617385,0,1.19613236835183,0.992750942742586,5.05573089694524,1.80823752868824,3.21016638432478,3.87278887530988,1.5624526181274,0.629156066554265,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89784391048286,0.563047426353546,2.19781949120718,0.428736758158132,0,22.5900737046827,16.5717085142584,22.9158205375759,9.79563139359019,23.9778881919725,25.6833925112498,19.5756525067224,20.7147753483141,24.9228324941313,25.3702552758392,0.830298780673413,3.19219898720825,2.39027048055788,2.67417388775123,2.72497111416377,1.47074806760011,2.889207461421,3.09052585858341,2.88827288632634,2.52697211763797,2.28131369901216,3.39527414494937,2.71560371662659,2.68905640100451,3.27382173046996,2.38146845641537,4.40360438590451,2.12200142510076,2.06042950401653,4.12156976376312,4.11443102862498,5.32427418478012,2.38436189947321,3.34296758254356,3.48204707536723,3.04612588410035,3.47563148458268,3.41990624869196,2.98769050460896,2.80571135828869,1.89816028998679,4.33419722452479,1.63692417267876,2.94379998253335,1.54325288784913,3.49734809113124,1.63752125911786,2.14871054048298,1.72159498861959,0.441182838239031,1.15933917810211 | |||
|short_description=p2@Gria4 | |||
}} |
Revision as of 06:04, 5 August 2015
Short description: | p2@Gria4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gria4_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 38bp_to_ENSMUST00000027020, ENSMUST00000063508, ENSMUST00000163309, NM_001113180, NM_001113181, NM_019691, uc009obp.2, uc009obq.2, uc012gnm.1_5end |
EntrezGene: | 14802 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.94e-19 | 33 |
neuronal stem cell | 2.94e-19 | 33 |
neuroblast | 2.94e-19 | 33 |
electrically signaling cell | 2.94e-19 | 33 |
electrically responsive cell | 2.67e-18 | 39 |
electrically active cell | 2.67e-18 | 39 |
CNS neuron (sensu Vertebrata) | 5.83e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.83e-12 | 23 |
ectodermal cell | 1.11e-11 | 44 |
neurectodermal cell | 1.11e-11 | 44 |
neural cell | 2.78e-11 | 43 |
autonomic neuron | 1.09e-08 | 9 |