FFCP PHASE1:Mm9::chr12:81619994..81620074,+: Difference between revisions
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{{FFCP|EntrezGene=108760|HGNC=|MCL_coexpression_id=1|UniProt=Q9JJ61|association_with_transcript=17bp_to_ENSMUST00000021558,NM_001081421,uc007oay.1_5end|description=CAGE_peak_1_at_Galntl1_5end|id=chr12:81619994..81620074,+|ontology_enrichment_celltype=CL:0000117!1.99e-10!23;CL:0000337!1.99e-10!23;CL:0000221!3.29e-07!44;CL:0000133!3.29e-07!44;CL:0002319!3.80e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-10,23;CL:0000337,1.71e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.66e-22!52;UBERON:0005068!1.66e-22!52;UBERON:0006241!1.66e-22!52;UBERON:0007135!1.66e-22!52;UBERON:0001017!3.48e-22!73;UBERON:0005743!3.48e-22!73;UBERON:0000955!1.18e-21!50;UBERON:0006238!1.18e-21!50;UBERON:0004121!2.01e-21!102;UBERON:0000924!2.01e-21!102;UBERON:0006601!2.01e-21!102;UBERON:0000073!3.80e-21!75;UBERON:0001016!3.80e-21!75;UBERON:0002616!4.37e-21!49;UBERON:0000033!6.85e-21!63;UBERON:0002346!7.04e-20!71;UBERON:0003075!7.04e-20!71;UBERON:0007284!7.04e-20!71;UBERON:0003080!2.62e-17!40;UBERON:0003056!5.72e-17!49;UBERON:0002780!1.28e-16!39;UBERON:0001890!1.28e-16!39;UBERON:0006240!1.28e-16!39;UBERON:0002020!3.73e-16!34;UBERON:0002791!1.85e-13!29;UBERON:0003528!1.85e-13!29;UBERON:0001893!1.85e-13!29;UBERON:0000468!2.67e-11!333;UBERON:0000153!3.62e-10!94;UBERON:0007811!2.78e-09!86;UBERON:0000956!2.79e-09!21;UBERON:0001869!2.79e-09!21;UBERON:0000203!2.79e-09!21;UBERON:0000025!9.03e-09!114;UBERON:0004111!9.05e-09!122;UBERON:0002619!9.31e-09!17;UBERON:0000922!2.09e-07!328;UBERON:0000479!2.99e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.49e-24,54;UBERON:0001049,1.16e-22,52;UBERON:0005068,1.16e-22,52;UBERON:0006241,1.16e-22,52;UBERON:0007135,1.16e-22,52;UBERON:0001017,2.50e-21,73;UBERON:0004121,1.43e-20,95;UBERON:0000924,1.43e-20,95;UBERON:0006601,1.43e-20,95;UBERON:0010371,2.07e-20,73;UBERON:0001016,2.56e-20,75;UBERON:0002346,3.69e-20,64;UBERON:0003075,3.69e-20,64;UBERON:0007284,3.69e-20,64;UBERON:0000955,1.17e-19,47;UBERON:0006238,1.17e-19,47;UBERON:0002616,4.24e-19,46;UBERON:0010314,2.00e-17,92;UBERON:0003080,2.00e-17,40;UBERON:0003056,4.40e-17,49;UBERON:0002780,9.90e-17,39;UBERON:0001890,9.90e-17,39;UBERON:0006240,9.90e-17,39;UBERON:0002020,2.90e-16,34;UBERON:0003528,1.51e-13,29;UBERON:0002791,1.51e-13,29;UBERON:0001893,1.51e-13,29;UBERON:0000956,2.44e-09,21;UBERON:0001869,2.44e-09,21;UBERON:0000203,2.44e-09,21;UBERON:0002619,8.23e-09,17;UBERON:0000025,1.63e-08,114;UBERON:0004111,1.97e-08,122;UBERON:0000479,8.01e-07,349|phase1_expression=21.9403920533568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.008658030214,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6255545165808,14.0913934395125,8.62669735159903,2.34717403304412,109.884678815745,63.7089929929968,88.6600339778732,32.7568226603348,80.5014360443841,0,0,0,4.11615097657515,29.5129443136919,3.6097046459421,42.0818238587963,62.4209355540999,55.1433321050376,9.14880236586657,7.11435836888911,0,0.988866362566974,0,66.5112245350858,136.397498389152,17.1087860308988,22.1409738863973,17.8776217148675,76.8401148046232,68.6901162359518,16.6587486932338,17.1563393122643,34.0110951045708,154.162233399144,89.3811366596314,89.8598219549024,52.7545150920775,59.0095301235542,48.4449434617787,87.942644685435,122.119486376875,137.365624751352,76.3088036376799,55.8096988732484,50.3278503728312,2.80186915332781,2.04043212288321,1.73918693221007,0,0,0.539703191637817,0,0,4.63466586434781,0,0,0,17.7462708918617,0,0,0,0,0,0,2.74041311325744,4.91981978929626,13.6566767939639,11.9704875468634,20.0947215686013,15.912469310668,11.7563659631046,21.518733405834,8.79666139307728,5.19109432242185,35.2822430884584,0,28.1474318908492,5.96272099843063,5.33362778448744,1.86391761218122,27.814175716097,21.5730108017859,1.02182822083437,0,0,0,100.209937761826,69.0825910256126,28.1465748732816,91.4315924211374,74.9246289977868,91.0111635170873,87.1235582673859,47.3553041903971,3.98102305952298,0.505445516867349,4.8401626853889,16.3951758133007,15.8632452059096,25.9289466919703,23.2085419467001,19.5264752564311,20.8825364064305,18.7403449119458,11.9003550539947,4.52692785158969,10.7790465695657,15.8356011747554,28.4954452155847,25.8583941779806,37.611233984394,41.9795558272205,5.9710280045548,0,0,0,2.27838349789052,2.57978665979206,4.32148947506436,6.15536312521547,10.8220327461072,11.1072321278912,7.44108623201305,10.9992094573844,7.94004328096752,17.9370236405694,23.4759473633106,14.1059728609789,11.2573990317506,10.3188554186794,9.26024289446565,163.185000085763,34.5759497594396,0,2.3800550999719,14.9301775374664,19.5078804362768,13.5310834388198,8.67239155880373,12.008414367623,11.7939888189787,5.21981967698963,9.22314146454461,12.8180956488137,10.9426059622633,13.2575579241002,2.69645822596266,3.45820879799511,1.99141273254367,8.72472344384176,8.68288695833939,7.88954149711563,10.386217720111,10.2794818198842,5.6810014111158,3.98390183882821,1.03327103585722,1.72698600625512,0.987177311374404,0.296452627087149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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108760 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JJ61 | |||
|association_with_transcript=17bp_to_ENSMUST00000021558,NM_001081421,uc007oay.1_5end | |||
|cluster_id=chr12:81619994..81620074,+ | |||
|description=CAGE_peak_1_at_Galntl1_5end | |||
|id=chr12:81619994..81620074,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.99e-10!23;CL:0000337!1.99e-10!23;CL:0000221!3.29e-07!44;CL:0000133!3.29e-07!44;CL:0002319!3.80e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-10,23;CL:0000337,1.71e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.66e-22!52;UBERON:0005068!1.66e-22!52;UBERON:0006241!1.66e-22!52;UBERON:0007135!1.66e-22!52;UBERON:0001017!3.48e-22!73;UBERON:0005743!3.48e-22!73;UBERON:0000955!1.18e-21!50;UBERON:0006238!1.18e-21!50;UBERON:0004121!2.01e-21!102;UBERON:0000924!2.01e-21!102;UBERON:0006601!2.01e-21!102;UBERON:0000073!3.80e-21!75;UBERON:0001016!3.80e-21!75;UBERON:0002616!4.37e-21!49;UBERON:0000033!6.85e-21!63;UBERON:0002346!7.04e-20!71;UBERON:0003075!7.04e-20!71;UBERON:0007284!7.04e-20!71;UBERON:0003080!2.62e-17!40;UBERON:0003056!5.72e-17!49;UBERON:0002780!1.28e-16!39;UBERON:0001890!1.28e-16!39;UBERON:0006240!1.28e-16!39;UBERON:0002020!3.73e-16!34;UBERON:0002791!1.85e-13!29;UBERON:0003528!1.85e-13!29;UBERON:0001893!1.85e-13!29;UBERON:0000468!2.67e-11!333;UBERON:0000153!3.62e-10!94;UBERON:0007811!2.78e-09!86;UBERON:0000956!2.79e-09!21;UBERON:0001869!2.79e-09!21;UBERON:0000203!2.79e-09!21;UBERON:0000025!9.03e-09!114;UBERON:0004111!9.05e-09!122;UBERON:0002619!9.31e-09!17;UBERON:0000922!2.09e-07!328;UBERON:0000479!2.99e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.49e-24,54;UBERON:0001049,1.16e-22,52;UBERON:0005068,1.16e-22,52;UBERON:0006241,1.16e-22,52;UBERON:0007135,1.16e-22,52;UBERON:0001017,2.50e-21,73;UBERON:0004121,1.43e-20,95;UBERON:0000924,1.43e-20,95;UBERON:0006601,1.43e-20,95;UBERON:0010371,2.07e-20,73;UBERON:0001016,2.56e-20,75;UBERON:0002346,3.69e-20,64;UBERON:0003075,3.69e-20,64;UBERON:0007284,3.69e-20,64;UBERON:0000955,1.17e-19,47;UBERON:0006238,1.17e-19,47;UBERON:0002616,4.24e-19,46;UBERON:0010314,2.00e-17,92;UBERON:0003080,2.00e-17,40;UBERON:0003056,4.40e-17,49;UBERON:0002780,9.90e-17,39;UBERON:0001890,9.90e-17,39;UBERON:0006240,9.90e-17,39;UBERON:0002020,2.90e-16,34;UBERON:0003528,1.51e-13,29;UBERON:0002791,1.51e-13,29;UBERON:0001893,1.51e-13,29;UBERON:0000956,2.44e-09,21;UBERON:0001869,2.44e-09,21;UBERON:0000203,2.44e-09,21;UBERON:0002619,8.23e-09,17;UBERON:0000025,1.63e-08,114;UBERON:0004111,1.97e-08,122;UBERON:0000479,8.01e-07,349 | |||
|phase1_expression=21.9403920533568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.008658030214,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6255545165808,14.0913934395125,8.62669735159903,2.34717403304412,109.884678815745,63.7089929929968,88.6600339778732,32.7568226603348,80.5014360443841,0,0,0,4.11615097657515,29.5129443136919,3.6097046459421,42.0818238587963,62.4209355540999,55.1433321050376,9.14880236586657,7.11435836888911,0,0.988866362566974,0,66.5112245350858,136.397498389152,17.1087860308988,22.1409738863973,17.8776217148675,76.8401148046232,68.6901162359518,16.6587486932338,17.1563393122643,34.0110951045708,154.162233399144,89.3811366596314,89.8598219549024,52.7545150920775,59.0095301235542,48.4449434617787,87.942644685435,122.119486376875,137.365624751352,76.3088036376799,55.8096988732484,50.3278503728312,2.80186915332781,2.04043212288321,1.73918693221007,0,0,0.539703191637817,0,0,4.63466586434781,0,0,0,17.7462708918617,0,0,0,0,0,0,2.74041311325744,4.91981978929626,13.6566767939639,11.9704875468634,20.0947215686013,15.912469310668,11.7563659631046,21.518733405834,8.79666139307728,5.19109432242185,35.2822430884584,0,28.1474318908492,5.96272099843063,5.33362778448744,1.86391761218122,27.814175716097,21.5730108017859,1.02182822083437,0,0,0,100.209937761826,69.0825910256126,28.1465748732816,91.4315924211374,74.9246289977868,91.0111635170873,87.1235582673859,47.3553041903971,3.98102305952298,0.505445516867349,4.8401626853889,16.3951758133007,15.8632452059096,25.9289466919703,23.2085419467001,19.5264752564311,20.8825364064305,18.7403449119458,11.9003550539947,4.52692785158969,10.7790465695657,15.8356011747554,28.4954452155847,25.8583941779806,37.611233984394,41.9795558272205,5.9710280045548,0,0,0,2.27838349789052,2.57978665979206,4.32148947506436,6.15536312521547,10.8220327461072,11.1072321278912,7.44108623201305,10.9992094573844,7.94004328096752,17.9370236405694,23.4759473633106,14.1059728609789,11.2573990317506,10.3188554186794,9.26024289446565,163.185000085763,34.5759497594396,0,2.3800550999719,14.9301775374664,19.5078804362768,13.5310834388198,8.67239155880373,12.008414367623,11.7939888189787,5.21981967698963,9.22314146454461,12.8180956488137,10.9426059622633,13.2575579241002,2.69645822596266,3.45820879799511,1.99141273254367,8.72472344384176,8.68288695833939,7.88954149711563,10.386217720111,10.2794818198842,5.6810014111158,3.98390183882821,1.03327103585722,1.72698600625512,0.987177311374404,0.296452627087149,1.00107063429656,2.75182593158484,1.12431056192427,1.21716072833102,0.72353147925725,1.01850340712568,1.72617682470486,0.324270453550071,1.64736847912849,1.43768206527355,2.60498663367952,1.5601883655728,0,1.07638448113147,0,2.21703828199926,10.2325362356062,9.28900365719548,14.7678224624414,15.4895563870411,18.9282070909252,14.0445748122748,12.6836871107569,31.0541233889196,34.5484915852089,25.9911272911704,9.83179888294428,4.66249451037918,4.05017364028232,0,0,4.91764273019036,7.45029215022778,82.8441044337007,78.4146183301839,0,17.9254358315105,2.2085575359138,1.95219372148319,0.861693590931196,0.955875191810208,1.33679204449436,0.849229592366497,0,0.584511715822624,0.790575555893047,64.2642632843614,9.9358059645788,55.0222715331819,58.802192326641,27.2200702904683,5.30980553359851,13.8384962608339,13.9068836203785,16.597247018519,24.5100571091041,24.9022469834581,25.0675444373175,22.5390912276053,27.0938007572388,9.16506598013866,4.21674434299995,9.28219889233682,34.3844001811326,19.0864759673189,22.8964870295475,13.5032332069903,16.847322196016,61.1805044375102,68.7814906116866,80.9876764644834,1.40803024838226,5.2958017715955,1.98475558249466,14.5099902588502,45.6944327549413,25.5123672446099,19.4576920725112,13.7878355785851,4.08073171281791,85.851914830866,0.341741761595705,20.8450736642855,9.63011542322501,2.0720530270516,0.820165366326151,2.74533807847827,0,0,0,3.81868247206045,22.6180235410512,20.5352661798117,14.148699647656,17.7725051612298,18.5608179184251,24.0058536564981,19.0102948168273,5.23511883968059,4.53652406521275,3.10669656543463,0,2.8408143748356,6.783798108741,6.22243802700952,10.2036260547408,8.78571852552046,9.27122185301456,9.11430693907651,5.34782656571125,1.20792060413003,1.72818003754719,1.89606672376907,8.10900861160657,12.2226039026144,4.93699127315621,5.19177417435696,2.98022032171897,3.60586348559907,2.36303243479324,2.22126189885925,2.057583779685,2.31900225814733,1.36441033035653,0.384847366561318,0.584384510907845,13.8305534005279,0,0.0897138566094757,0,49.6497256662729,51.8003632245262,28.7548050099606,16.5063651890881,0.501572104035363,55.3456805764725,52.4770769618182,55.5708648036215,87.1295634482496,66.4530044177523,67.2300568676833,64.8021600222534,67.9985016868573,74.7684974823938,77.664046762773,5.60451676954554,16.7590446828433,19.2928974502172,25.2830985751026,12.7864029203069,14.5236371675511,30.8922951644245,24.9302419259062,24.7107791385698,23.753537905797,27.3757643881459,28.6712038906836,25.8450560616875,25.6100609619477,24.23776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| |||
|short_description=p1@Galntl1 | |||
}} |
Revision as of 08:04, 5 August 2015
Short description: | p1@Galntl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Galntl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 17bp_to_ENSMUST00000021558, NM_001081421, uc007oay.1_5end |
EntrezGene: | 108760 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.71e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.71e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.49e-24 | 54 |
neural tube | 1.16e-22 | 52 |
neural rod | 1.16e-22 | 52 |
future spinal cord | 1.16e-22 | 52 |
neural keel | 1.16e-22 | 52 |
central nervous system | 2.50e-21 | 73 |
ectoderm-derived structure | 1.43e-20 | 95 |
ectoderm | 1.43e-20 | 95 |
presumptive ectoderm | 1.43e-20 | 95 |
ecto-epithelium | 2.07e-20 | 73 |
nervous system | 2.56e-20 | 75 |
neurectoderm | 3.69e-20 | 64 |
neural plate | 3.69e-20 | 64 |
presumptive neural plate | 3.69e-20 | 64 |
brain | 1.17e-19 | 47 |
future brain | 1.17e-19 | 47 |
regional part of brain | 4.24e-19 | 46 |
structure with developmental contribution from neural crest | 2.00e-17 | 92 |
anterior neural tube | 2.00e-17 | 40 |
pre-chordal neural plate | 4.40e-17 | 49 |
regional part of forebrain | 9.90e-17 | 39 |
forebrain | 9.90e-17 | 39 |
future forebrain | 9.90e-17 | 39 |
gray matter | 2.90e-16 | 34 |
brain grey matter | 1.51e-13 | 29 |
regional part of telencephalon | 1.51e-13 | 29 |
telencephalon | 1.51e-13 | 29 |
cerebral cortex | 2.44e-09 | 21 |
cerebral hemisphere | 2.44e-09 | 21 |
pallium | 2.44e-09 | 21 |
regional part of cerebral cortex | 8.23e-09 | 17 |
tube | 1.63e-08 | 114 |
anatomical conduit | 1.97e-08 | 122 |
tissue | 8.01e-07 | 349 |