FFCP PHASE1:Mm9::chr6:144158183..144158210,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20678|HGNC=|MCL_coexpression_id=76|UniProt=Q2TBA9,B2KFM4,P35710,Q8C4K8,B2KFM9|association_with_transcript=-95bp_to_ENSMUST00000150087,NM_001113559,NM_001243163,NM_011444_5end|description=CAGE_peak_11_at_Sox5_5end|id=chr6:144158183..144158210,-|ontology_enrichment_celltype=CL:0000540!6.15e-11!33;CL:0000047!6.15e-11!33;CL:0000031!6.15e-11!33;CL:0000404!6.15e-11!33;CL:0000393!1.79e-08!39;CL:0000211!1.79e-08!39;CL:0000221!3.20e-07!44;CL:0000133!3.20e-07!44;CL:0000107!5.68e-07!9;CL:0002609!7.16e-07!6;CL:0002319!8.94e-07!43|ontology_enrichment_celltype_v019_2=CL:0002609,2.79e-21,6;CL:0002608,4.71e-11,3;CL:0000117,1.13e-10,23;CL:0000337,1.13e-10,23;CL:0000540,1.96e-10,33;CL:0000047,1.96e-10,33;CL:0000031,1.96e-10,33;CL:0000404,1.96e-10,33;CL:0000393,1.61e-08,39;CL:0000211,1.61e-08,39;CL:0002319,1.53e-07,43;CL:0000221,2.52e-07,44;CL:0000133,2.52e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.45e-15!34;UBERON:0002791!5.84e-14!29;UBERON:0003528!5.84e-14!29;UBERON:0001893!5.84e-14!29;UBERON:0000956!2.58e-12!21;UBERON:0001869!2.58e-12!21;UBERON:0000203!2.58e-12!21;UBERON:0001017!6.22e-12!73;UBERON:0005743!6.22e-12!73;UBERON:0000073!1.03e-11!75;UBERON:0001016!1.03e-11!75;UBERON:0002780!1.30e-11!39;UBERON:0001890!1.30e-11!39;UBERON:0006240!1.30e-11!39;UBERON:0003080!4.83e-11!40;UBERON:0001049!3.80e-10!52;UBERON:0005068!3.80e-10!52;UBERON:0006241!3.80e-10!52;UBERON:0007135!3.80e-10!52;UBERON:0002346!1.77e-09!71;UBERON:0003075!1.77e-09!71;UBERON:0007284!1.77e-09!71;UBERON:0003056!1.91e-09!49;UBERON:0004121!2.14e-09!102;UBERON:0000924!2.14e-09!102;UBERON:0006601!2.14e-09!102;UBERON:0002616!3.05e-09!49;UBERON:0002619!5.47e-09!17;UBERON:0000955!7.83e-09!50;UBERON:0006238!7.83e-09!50;UBERON:0000033!2.55e-07!63;UBERON:0002021!3.27e-07!10;UBERON:0000411!3.27e-07!10;UBERON:0001950!3.27e-07!10;UBERON:0002410!5.68e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.01e-27,29;UBERON:0002791,2.01e-27,29;UBERON:0001893,2.01e-27,29;UBERON:0000956,4.10e-26,21;UBERON:0001869,4.10e-26,21;UBERON:0000203,4.10e-26,21;UBERON:0002020,6.94e-26,34;UBERON:0002780,1.45e-19,39;UBERON:0001890,1.45e-19,39;UBERON:0006240,1.45e-19,39;UBERON:0003080,5.38e-19,40;UBERON:0002619,7.71e-19,17;UBERON:0002616,4.27e-16,46;UBERON:0001049,9.63e-16,52;UBERON:0005068,9.63e-16,52;UBERON:0006241,9.63e-16,52;UBERON:0007135,9.63e-16,52;UBERON:0000955,1.10e-15,47;UBERON:0006238,1.10e-15,47;UBERON:0000073,4.94e-15,54;UBERON:0003056,6.53e-15,49;UBERON:0001017,3.73e-13,73;UBERON:0001016,1.06e-12,75;UBERON:0002346,3.79e-12,64;UBERON:0003075,3.79e-12,64;UBERON:0007284,3.79e-12,64;UBERON:0002021,3.81e-12,10;UBERON:0000411,3.81e-12,10;UBERON:0001950,3.81e-12,10;UBERON:0010371,3.15e-10,73;UBERON:0004121,3.14e-09,95;UBERON:0000924,3.14e-09,95;UBERON:0006601,3.14e-09,95;UBERON:0001954,4.19e-08,7;UBERON:0003022,4.19e-08,7;UBERON:0002421,4.19e-08,7;UBERON:0000349,4.19e-08,7;UBERON:0002600,4.19e-08,7;UBERON:0010314,2.07e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,5.59923906465779,3.91517221161903,5.8890989178387,0,1.10434270475807,1.71487118900936,2.20444583341944,2.75765635983006,0,0.127687338085188,0.153606533256243,1.05509030184155,0.731901148819277,1.56274011167028,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0.151143120213571,0,0,0,0.539703191637817,0,1.79210754838934,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,1.00523481690292,0.869121600961382,0.511430914660661,0,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.258703370739016,0,3.02569728268511,1.58356011747554,0.43839146485515,1.11218899690239,0.696504333044333,0.205782136407943,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,1.74937841044784,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0,0,0.295220295959204,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0,0.624075346229121,0.505157755894224,0.358794827043824,0,0,0.37898282354097,0,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0.716906393857656,0.668396022247182,1.41538265394416,1.21443210502468,0.584511715822624,0.790575555893047,0,0,0,0.325773918707152,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,3.95326289831947,2.30162618253588,2.86447756719698,1.71853182343688,0,0.755393897389701,0.675022500231806,2.2516060161211,0.453142408984205,1.55328093525546,0.62272408550506,1.59609949360412,0.341467211508268,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,1.01078884705519,0,0.565879024158229,0.37456602987953,0.512201219238954,0.516919220600519,0.476293691283074,0.463537303779422,0.38581844092741,0,0.147198920134397,1.37147700954166,0.354951612318675,0.238436189947321,0.726732083161643,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,1.12228454331548,0.237270036248348,0.394017929502254,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0,0|short_description=p11@Sox5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20678 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q2TBA9,uniprot:B2KFM4,uniprot:P35710,uniprot:Q8C4K8,uniprot:B2KFM9 | |||
|association_with_transcript=-95bp_to_ENSMUST00000150087,NM_001113559,NM_001243163,NM_011444_5end | |||
|cluster_id=chr6:144158183..144158210,- | |||
|description=CAGE_peak_11_at_Sox5_5end | |||
|id=chr6:144158183..144158210,- | |||
|ontology_enrichment_celltype=CL:0000540!6.15e-11!33;CL:0000047!6.15e-11!33;CL:0000031!6.15e-11!33;CL:0000404!6.15e-11!33;CL:0000393!1.79e-08!39;CL:0000211!1.79e-08!39;CL:0000221!3.20e-07!44;CL:0000133!3.20e-07!44;CL:0000107!5.68e-07!9;CL:0002609!7.16e-07!6;CL:0002319!8.94e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.79e-21,6;CL:0002608,4.71e-11,3;CL:0000117,1.13e-10,23;CL:0000337,1.13e-10,23;CL:0000540,1.96e-10,33;CL:0000047,1.96e-10,33;CL:0000031,1.96e-10,33;CL:0000404,1.96e-10,33;CL:0000393,1.61e-08,39;CL:0000211,1.61e-08,39;CL:0002319,1.53e-07,43;CL:0000221,2.52e-07,44;CL:0000133,2.52e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.45e-15!34;UBERON:0002791!5.84e-14!29;UBERON:0003528!5.84e-14!29;UBERON:0001893!5.84e-14!29;UBERON:0000956!2.58e-12!21;UBERON:0001869!2.58e-12!21;UBERON:0000203!2.58e-12!21;UBERON:0001017!6.22e-12!73;UBERON:0005743!6.22e-12!73;UBERON:0000073!1.03e-11!75;UBERON:0001016!1.03e-11!75;UBERON:0002780!1.30e-11!39;UBERON:0001890!1.30e-11!39;UBERON:0006240!1.30e-11!39;UBERON:0003080!4.83e-11!40;UBERON:0001049!3.80e-10!52;UBERON:0005068!3.80e-10!52;UBERON:0006241!3.80e-10!52;UBERON:0007135!3.80e-10!52;UBERON:0002346!1.77e-09!71;UBERON:0003075!1.77e-09!71;UBERON:0007284!1.77e-09!71;UBERON:0003056!1.91e-09!49;UBERON:0004121!2.14e-09!102;UBERON:0000924!2.14e-09!102;UBERON:0006601!2.14e-09!102;UBERON:0002616!3.05e-09!49;UBERON:0002619!5.47e-09!17;UBERON:0000955!7.83e-09!50;UBERON:0006238!7.83e-09!50;UBERON:0000033!2.55e-07!63;UBERON:0002021!3.27e-07!10;UBERON:0000411!3.27e-07!10;UBERON:0001950!3.27e-07!10;UBERON:0002410!5.68e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.01e-27,29;UBERON:0002791,2.01e-27,29;UBERON:0001893,2.01e-27,29;UBERON:0000956,4.10e-26,21;UBERON:0001869,4.10e-26,21;UBERON:0000203,4.10e-26,21;UBERON:0002020,6.94e-26,34;UBERON:0002780,1.45e-19,39;UBERON:0001890,1.45e-19,39;UBERON:0006240,1.45e-19,39;UBERON:0003080,5.38e-19,40;UBERON:0002619,7.71e-19,17;UBERON:0002616,4.27e-16,46;UBERON:0001049,9.63e-16,52;UBERON:0005068,9.63e-16,52;UBERON:0006241,9.63e-16,52;UBERON:0007135,9.63e-16,52;UBERON:0000955,1.10e-15,47;UBERON:0006238,1.10e-15,47;UBERON:0000073,4.94e-15,54;UBERON:0003056,6.53e-15,49;UBERON:0001017,3.73e-13,73;UBERON:0001016,1.06e-12,75;UBERON:0002346,3.79e-12,64;UBERON:0003075,3.79e-12,64;UBERON:0007284,3.79e-12,64;UBERON:0002021,3.81e-12,10;UBERON:0000411,3.81e-12,10;UBERON:0001950,3.81e-12,10;UBERON:0010371,3.15e-10,73;UBERON:0004121,3.14e-09,95;UBERON:0000924,3.14e-09,95;UBERON:0006601,3.14e-09,95;UBERON:0001954,4.19e-08,7;UBERON:0003022,4.19e-08,7;UBERON:0002421,4.19e-08,7;UBERON:0000349,4.19e-08,7;UBERON:0002600,4.19e-08,7;UBERON:0010314,2.07e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,5.59923906465779,3.91517221161903,5.8890989178387,0,1.10434270475807,1.71487118900936,2.20444583341944,2.75765635983006,0,0.127687338085188,0.153606533256243,1.05509030184155,0.731901148819277,1.56274011167028,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0.151143120213571,0,0,0,0.539703191637817,0,1.79210754838934,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,1.00523481690292,0.869121600961382,0.511430914660661,0,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.258703370739016,0,3.02569728268511,1.58356011747554,0.43839146485515,1.11218899690239,0.696504333044333,0.205782136407943,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,1.74937841044784,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0,0,0.295220295959204,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0,0.624075346229121,0.505157755894224,0.358794827043824,0,0,0.37898282354097,0,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0.716906393857656,0.668396022247182,1.41538265394416,1.21443210502468,0.584511715822624,0.790575555893047,0,0,0,0.325773918707152,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,3.95326289831947,2.30162618253588,2.86447756719698,1.71853182343688,0,0.755393897389701,0.675022500231806,2.2516060161211,0.453142408984205,1.55328093525546,0.62272408550506,1.59609949360412,0.341467211508268,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,1.01078884705519,0,0.565879024158229,0.37456602987953,0.512201219238954,0.516919220600519,0.476293691283074,0.463537303779422,0.38581844092741,0,0.147198920134397,1.37147700954166,0.354951612318675,0.238436189947321,0.726732083161643,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,1.12228454331548,0.237270036248348,0.394017929502254,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p11@Sox5 | |||
}} |
Revision as of 09:36, 5 August 2015
Short description: | p11@Sox5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Sox5_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -95bp_to_ENSMUST00000150087, NM_001113559, NM_001243163, NM_011444_5end |
EntrezGene: | 20678 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.79e-21 | 6 |
hippocampal neuron | 4.71e-11 | 3 |
CNS neuron (sensu Vertebrata) | 1.13e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-10 | 23 |
neuron | 1.96e-10 | 33 |
neuronal stem cell | 1.96e-10 | 33 |
neuroblast | 1.96e-10 | 33 |
electrically signaling cell | 1.96e-10 | 33 |
electrically responsive cell | 1.61e-08 | 39 |
electrically active cell | 1.61e-08 | 39 |
neural cell | 1.53e-07 | 43 |
ectodermal cell | 2.52e-07 | 44 |
neurectodermal cell | 2.52e-07 | 44 |