FFCP PHASE1:Mm9::chr6:147035545..147035559,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=545893|HGNC=|MCL_coexpression_id=11|UniProt=Q3UU94|association_with_transcript=0bp_to_ENSMUST00000100780,NM_001034903,uc009est.1_5end|description=CAGE_peak_2_at_Gm5887_5end|id=chr6:147035545..147035559,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000710,7.32e-08,1;CL:0002077,7.32e-08,1;CL:0005014,7.32e-08,1;CL:0002315,7.32e-08,1;CL:0002490,7.32e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!7.21e-12!18;UBERON:0005564!7.21e-12!18;UBERON:0004176!6.03e-11!17;UBERON:0009196!6.03e-11!17;UBERON:0009117!6.03e-11!17;UBERON:0000473!5.09e-09!14;UBERON:0003133!1.68e-08!24;UBERON:0003135!3.73e-08!15;UBERON:0005156!1.98e-07!26;UBERON:0000990!1.98e-07!26;UBERON:0003101!2.10e-07!16;UBERON:0000079!2.10e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.57e-11,14;UBERON:0003135,3.52e-10,15;UBERON:0003101,1.53e-09,16;UBERON:0000079,1.53e-09,16;UBERON:0004176,5.61e-09,17;UBERON:0009196,5.61e-09,17;UBERON:0009117,5.61e-09,17;UBERON:0000991,1.78e-08,18;UBERON:0005564,1.78e-08,18;UBERON:0002113,9.82e-08,14;UBERON:0003918,9.82e-08,14;UBERON:0011143,9.82e-08,14;UBERON:0005095,9.82e-08,14;UBERON:0007687,9.82e-08,14;UBERON:0000029,1.14e-07,1;UBERON:0001097,1.14e-07,1;UBERON:0003968,1.14e-07,1;UBERON:0001467,1.14e-07,1|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,2.66788438833342,0,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,0,0,0.153606533256243,0.263772575460388,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,3.09855523508697,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0,0,0.203651327845314,0,0.210407459670956,1.20149420536089,3.98547399544926,6.43694784149637,4.56569506510662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.678980343100753,0.704070744865506,0.167506257441816,0.714130922658041,0.195133647857799,1.10344600874334,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.709700426041343,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0.539457385539283,0.0826534557253359,0,0,0,0.56369293868419,1.04661582230785,1.32366792365678,0.777804753376191,1.03327858782185,1.18269287843545,1.29092962510329,0.5208175393758,0.524296722128554,0,0.288030006257865,0,0,0.410843828659309,0.129920822977795,0.358053391334963,0.198681354781265,0.240390899039938,0,0,0.228620419965,0.403304740547362,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0|short_description=p2@Gm5887}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:545893 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UU94 | |||
|association_with_transcript=0bp_to_ENSMUST00000100780,NM_001034903,uc009est.1_5end | |||
|cluster_id=chr6:147035545..147035559,- | |||
|description=CAGE_peak_2_at_Gm5887_5end | |||
|id=chr6:147035545..147035559,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000710,7.32e-08,1;CL:0002077,7.32e-08,1;CL:0005014,7.32e-08,1;CL:0002315,7.32e-08,1;CL:0002490,7.32e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!7.21e-12!18;UBERON:0005564!7.21e-12!18;UBERON:0004176!6.03e-11!17;UBERON:0009196!6.03e-11!17;UBERON:0009117!6.03e-11!17;UBERON:0000473!5.09e-09!14;UBERON:0003133!1.68e-08!24;UBERON:0003135!3.73e-08!15;UBERON:0005156!1.98e-07!26;UBERON:0000990!1.98e-07!26;UBERON:0003101!2.10e-07!16;UBERON:0000079!2.10e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.57e-11,14;UBERON:0003135,3.52e-10,15;UBERON:0003101,1.53e-09,16;UBERON:0000079,1.53e-09,16;UBERON:0004176,5.61e-09,17;UBERON:0009196,5.61e-09,17;UBERON:0009117,5.61e-09,17;UBERON:0000991,1.78e-08,18;UBERON:0005564,1.78e-08,18;UBERON:0002113,9.82e-08,14;UBERON:0003918,9.82e-08,14;UBERON:0011143,9.82e-08,14;UBERON:0005095,9.82e-08,14;UBERON:0007687,9.82e-08,14;UBERON:0000029,1.14e-07,1;UBERON:0001097,1.14e-07,1;UBERON:0003968,1.14e-07,1;UBERON:0001467,1.14e-07,1 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,2.66788438833342,0,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,0,0,0.153606533256243,0.263772575460388,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,3.09855523508697,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0,0,0.203651327845314,0,0.210407459670956,1.20149420536089,3.98547399544926,6.43694784149637,4.56569506510662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.678980343100753,0.704070744865506,0.167506257441816,0.714130922658041,0.195133647857799,1.10344600874334,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.709700426041343,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0.539457385539283,0.0826534557253359,0,0,0,0.56369293868419,1.04661582230785,1.32366792365678,0.777804753376191,1.03327858782185,1.18269287843545,1.29092962510329,0.5208175393758,0.524296722128554,0,0.288030006257865,0,0,0.410843828659309,0.129920822977795,0.358053391334963,0.198681354781265,0.240390899039938,0,0,0.228620419965,0.403304740547362,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p2@Gm5887 | |||
}} |
Revision as of 10:25, 5 August 2015
Short description: | p2@Gm5887 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm5887_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000100780, NM_001034903, uc009est.1_5end |
EntrezGene: | 545893 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 7.32e-08 | 1 |
ecto-epithelial cell | 7.32e-08 | 1 |
auditory epithelial support cell | 7.32e-08 | 1 |
supporting cell of cochlea | 7.32e-08 | 1 |
organ of Corti supporting cell | 7.32e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 6.57e-11 | 14 |
male reproductive organ | 3.52e-10 | 15 |
male organism | 1.53e-09 | 16 |
male reproductive system | 1.53e-09 | 16 |
external genitalia | 5.61e-09 | 17 |
indifferent external genitalia | 5.61e-09 | 17 |
indifferent gonad | 5.61e-09 | 17 |
gonad | 1.78e-08 | 18 |
gonad primordium | 1.78e-08 | 18 |
kidney | 9.82e-08 | 14 |
kidney mesenchyme | 9.82e-08 | 14 |
upper urinary tract | 9.82e-08 | 14 |
kidney rudiment | 9.82e-08 | 14 |
kidney field | 9.82e-08 | 14 |
lymph node | 1.14e-07 | 1 |
axillary lymph node | 1.14e-07 | 1 |
peripheral lymph node | 1.14e-07 | 1 |
shoulder | 1.14e-07 | 1 |