FFCP PHASE1:Mm9::chr6:147995884..147995900,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=330450|HGNC=|UniProt=Q7TNT2,B2KFC5|association_with_transcript=-37bp_to_ENSMUST00000111607,NM_178797,uc009etb.1,uc009etc.1_5end|description=CAGE_peak_3_at_Far2_5end|id=chr6:147995884..147995900,+|ontology_enrichment_celltype=CL:0002563!1.32e-07!9;CL:0002251!1.32e-07!9;CL:0000117!2.43e-07!23;CL:0000337!2.43e-07!23|ontology_enrichment_celltype_v019_2=CL:0002563,2.90e-10,9;CL:0002251,2.90e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.39e-13!52;UBERON:0005068!1.39e-13!52;UBERON:0006241!1.39e-13!52;UBERON:0007135!1.39e-13!52;UBERON:0000955!4.99e-13!50;UBERON:0006238!4.99e-13!50;UBERON:0002346!6.89e-13!71;UBERON:0003075!6.89e-13!71;UBERON:0007284!6.89e-13!71;UBERON:0002020!1.20e-12!34;UBERON:0002616!1.38e-12!49;UBERON:0000344!1.35e-11!15;UBERON:0000033!3.61e-11!63;UBERON:0002791!4.05e-10!29;UBERON:0003528!4.05e-10!29;UBERON:0001893!4.05e-10!29;UBERON:0001242!4.60e-10!13;UBERON:0000060!4.60e-10!13;UBERON:0001262!4.60e-10!13;UBERON:0004786!4.60e-10!13;UBERON:0003056!5.37e-10!49;UBERON:0003080!5.80e-10!40;UBERON:0002780!1.99e-09!39;UBERON:0001890!1.99e-09!39;UBERON:0006240!1.99e-09!39;UBERON:0001017!4.54e-09!73;UBERON:0005743!4.54e-09!73;UBERON:0000160!7.05e-09!43;UBERON:0000073!2.08e-08!75;UBERON:0001016!2.08e-08!75;UBERON:0003350!1.32e-07!9;UBERON:0004808!1.32e-07!9;UBERON:0001277!1.32e-07!9;UBERON:0004121!2.26e-07!102;UBERON:0000924!2.26e-07!102;UBERON:0006601!2.26e-07!102;UBERON:0002021!8.32e-07!10;UBERON:0000411!8.32e-07!10;UBERON:0001950!8.32e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.38e-22,31;UBERON:0000073,1.22e-15,54;UBERON:0000344,4.53e-15,15;UBERON:0001049,1.71e-13,52;UBERON:0005068,1.71e-13,52;UBERON:0006241,1.71e-13,52;UBERON:0007135,1.71e-13,52;UBERON:0002020,3.49e-13,34;UBERON:0005409,6.46e-13,47;UBERON:0001242,1.49e-12,13;UBERON:0001262,1.49e-12,13;UBERON:0004786,1.49e-12,13;UBERON:0001017,1.05e-11,73;UBERON:0002346,1.12e-11,64;UBERON:0003075,1.12e-11,64;UBERON:0007284,1.12e-11,64;UBERON:0001016,3.83e-11,75;UBERON:0011216,1.69e-10,194;UBERON:0003350,2.90e-10,9;UBERON:0004808,2.90e-10,9;UBERON:0001277,2.90e-10,9;UBERON:0000955,4.76e-10,47;UBERON:0006238,4.76e-10,47;UBERON:0002616,1.80e-09,46;UBERON:0003528,1.84e-09,29;UBERON:0002791,1.84e-09,29;UBERON:0001893,1.84e-09,29;UBERON:0010371,3.41e-09,73;UBERON:0002021,7.04e-09,10;UBERON:0000411,7.04e-09,10;UBERON:0001950,7.04e-09,10;UBERON:0003080,1.43e-08,40;UBERON:0004121,1.56e-08,95;UBERON:0000924,1.56e-08,95;UBERON:0006601,1.56e-08,95;UBERON:0000485,4.97e-08,11;UBERON:0003056,5.47e-08,49;UBERON:0004923,5.81e-08,24;UBERON:0002780,7.23e-08,39;UBERON:0001890,7.23e-08,39;UBERON:0006240,7.23e-08,39|phase1_expression=0,5.23463111459042,3.63999391511629,2.41971369045464,0.500895729946347,6.04365378882803,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.59973479776923,5.04700418347774,4.01962374880514,5.1691439539089,6.03319451520489,3.80046838912748,3.78045194639896,6.43018480900384,0,0,0,6.64358725427932,5.98444723290572,6.73758875665818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,1.71390590642282,2.87129103237098,0.61245399607477,0.0958454710182364,0.919218786610021,4.40463523997555,5.74593021383345,4.6081959976873,1.84640802822271,2.37867873366265,5.2091337055676,0.837548997004143,0.56276261003168,2.75036845998258,2.94628585473668,2.42031857358475,1.1183966749518,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.593768556259299,0.346970653532272,0.304465478312141,0,0.301445281105245,0.23517741427141,0.753999547978053,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,4.08731288333746,0,0,0,2.99581278809645,3.20250421973039,2.01046963380583,2.78118912307642,2.81287003063364,4.57133698031032,3.40706652442291,0,0,0,9.46988351489133,0,0,0,0.150704817835715,0.136072998302656,0.512454881139399,0.0937017245597288,4.9153640440413,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,1.13195073617213,0.991256348951394,6.61126416658861,0,0,0.38660238396628,1.00841762311671,1.77902435075896,1.90225626112559,2.37264530772256,2.63518327558417,1.75934646160189,2.18852119245266,1.75467678407208,6.29173586057955,3.02593269824572,2.98711909881551,0,0.114248512609729,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.651859905768103,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,3.53211297973142,2.57865710502847,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0.164140899745061,5.82961673259701,1.8542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0,0.436725127492355,0,0.0826534557253359,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,4.01026859407578,2.23409137046794,4.11049511862385,1.5107877947794,0.675022500231806,3.60256962579376,2.71885445390523,2.07104124700728,0,0,0.341467211508268,0,0.838452650511929,0.551530525350042,0.888986911206461,0.412070114477788,1.28367683836726,1.01078884705519,0.760437899670719,0.565879024158229,0.655490552289177,0.640251524048693,0.516919220600519,0.952587382566147,0.927074607558844,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.581385666529314,0.376437521661322,0.592302255241736,0.73171189149109,0.789209134313529,1.22223702461276,0.561142271657738,0.355905054372522,0.591026894253381,0,0.464810523557898,0.385813221962283,1.24905288968973,0.701794825336225,0.644613162144895,0.956441660344217,0,0.231867835620421|short_description=p3@Far2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:330450 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TNT2,uniprot:B2KFC5 | |||
|association_with_transcript=-37bp_to_ENSMUST00000111607,NM_178797,uc009etb.1,uc009etc.1_5end | |||
|cluster_id=chr6:147995884..147995900,+ | |||
|description=CAGE_peak_3_at_Far2_5end | |||
|id=chr6:147995884..147995900,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.32e-07!9;CL:0002251!1.32e-07!9;CL:0000117!2.43e-07!23;CL:0000337!2.43e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.90e-10,9;CL:0002251,2.90e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.39e-13!52;UBERON:0005068!1.39e-13!52;UBERON:0006241!1.39e-13!52;UBERON:0007135!1.39e-13!52;UBERON:0000955!4.99e-13!50;UBERON:0006238!4.99e-13!50;UBERON:0002346!6.89e-13!71;UBERON:0003075!6.89e-13!71;UBERON:0007284!6.89e-13!71;UBERON:0002020!1.20e-12!34;UBERON:0002616!1.38e-12!49;UBERON:0000344!1.35e-11!15;UBERON:0000033!3.61e-11!63;UBERON:0002791!4.05e-10!29;UBERON:0003528!4.05e-10!29;UBERON:0001893!4.05e-10!29;UBERON:0001242!4.60e-10!13;UBERON:0000060!4.60e-10!13;UBERON:0001262!4.60e-10!13;UBERON:0004786!4.60e-10!13;UBERON:0003056!5.37e-10!49;UBERON:0003080!5.80e-10!40;UBERON:0002780!1.99e-09!39;UBERON:0001890!1.99e-09!39;UBERON:0006240!1.99e-09!39;UBERON:0001017!4.54e-09!73;UBERON:0005743!4.54e-09!73;UBERON:0000160!7.05e-09!43;UBERON:0000073!2.08e-08!75;UBERON:0001016!2.08e-08!75;UBERON:0003350!1.32e-07!9;UBERON:0004808!1.32e-07!9;UBERON:0001277!1.32e-07!9;UBERON:0004121!2.26e-07!102;UBERON:0000924!2.26e-07!102;UBERON:0006601!2.26e-07!102;UBERON:0002021!8.32e-07!10;UBERON:0000411!8.32e-07!10;UBERON:0001950!8.32e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.38e-22,31;UBERON:0000073,1.22e-15,54;UBERON:0000344,4.53e-15,15;UBERON:0001049,1.71e-13,52;UBERON:0005068,1.71e-13,52;UBERON:0006241,1.71e-13,52;UBERON:0007135,1.71e-13,52;UBERON:0002020,3.49e-13,34;UBERON:0005409,6.46e-13,47;UBERON:0001242,1.49e-12,13;UBERON:0001262,1.49e-12,13;UBERON:0004786,1.49e-12,13;UBERON:0001017,1.05e-11,73;UBERON:0002346,1.12e-11,64;UBERON:0003075,1.12e-11,64;UBERON:0007284,1.12e-11,64;UBERON:0001016,3.83e-11,75;UBERON:0011216,1.69e-10,194;UBERON:0003350,2.90e-10,9;UBERON:0004808,2.90e-10,9;UBERON:0001277,2.90e-10,9;UBERON:0000955,4.76e-10,47;UBERON:0006238,4.76e-10,47;UBERON:0002616,1.80e-09,46;UBERON:0003528,1.84e-09,29;UBERON:0002791,1.84e-09,29;UBERON:0001893,1.84e-09,29;UBERON:0010371,3.41e-09,73;UBERON:0002021,7.04e-09,10;UBERON:0000411,7.04e-09,10;UBERON:0001950,7.04e-09,10;UBERON:0003080,1.43e-08,40;UBERON:0004121,1.56e-08,95;UBERON:0000924,1.56e-08,95;UBERON:0006601,1.56e-08,95;UBERON:0000485,4.97e-08,11;UBERON:0003056,5.47e-08,49;UBERON:0004923,5.81e-08,24;UBERON:0002780,7.23e-08,39;UBERON:0001890,7.23e-08,39;UBERON:0006240,7.23e-08,39 | |||
|phase1_expression=0,5.23463111459042,3.63999391511629,2.41971369045464,0.500895729946347,6.04365378882803,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.59973479776923,5.04700418347774,4.01962374880514,5.1691439539089,6.03319451520489,3.80046838912748,3.78045194639896,6.43018480900384,0,0,0,6.64358725427932,5.98444723290572,6.73758875665818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,1.71390590642282,2.87129103237098,0.61245399607477,0.0958454710182364,0.919218786610021,4.40463523997555,5.74593021383345,4.6081959976873,1.84640802822271,2.37867873366265,5.2091337055676,0.837548997004143,0.56276261003168,2.75036845998258,2.94628585473668,2.42031857358475,1.1183966749518,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.593768556259299,0.346970653532272,0.304465478312141,0,0.301445281105245,0.23517741427141,0.753999547978053,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,4.08731288333746,0,0,0,2.99581278809645,3.20250421973039,2.01046963380583,2.78118912307642,2.81287003063364,4.57133698031032,3.40706652442291,0,0,0,9.46988351489133,0,0,0,0.150704817835715,0.136072998302656,0.512454881139399,0.0937017245597288,4.9153640440413,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,1.13195073617213,0.991256348951394,6.61126416658861,0,0,0.38660238396628,1.00841762311671,1.77902435075896,1.90225626112559,2.37264530772256,2.63518327558417,1.75934646160189,2.18852119245266,1.75467678407208,6.29173586057955,3.02593269824572,2.98711909881551,0,0.114248512609729,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.651859905768103,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,3.53211297973142,2.57865710502847,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0.164140899745061,5.82961673259701,1.8542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0,0.436725127492355,0,0.0826534557253359,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,4.01026859407578,2.23409137046794,4.11049511862385,1.5107877947794,0.675022500231806,3.60256962579376,2.71885445390523,2.07104124700728,0,0,0.341467211508268,0,0.838452650511929,0.551530525350042,0.888986911206461,0.412070114477788,1.28367683836726,1.01078884705519,0.760437899670719,0.565879024158229,0.655490552289177,0.640251524048693,0.516919220600519,0.952587382566147,0.927074607558844,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.581385666529314,0.376437521661322,0.592302255241736,0.73171189149109,0.789209134313529,1.22223702461276,0.561142271657738,0.355905054372522,0.591026894253381,0,0.464810523557898,0.385813221962283,1.24905288968973,0.701794825336225,0.644613162144895,0.956441660344217,0,0.231867835620421 | |||
|short_description=p3@Far2 | |||
}} |
Revision as of 10:34, 5 August 2015
Short description: | p3@Far2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Far2_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_ENSMUST00000111607, NM_178797, uc009etb.1, uc009etc.1_5end |
EntrezGene: | 330450 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.90e-10 | 9 |
epithelial cell of alimentary canal | 2.90e-10 | 9 |