FFCP PHASE1:Mm9::chr9:62193253..62193260,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=469 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:62193253..62193260,+ | |||
|description=CAGE_peak_at_chr9:62193253..62193260,+ | |description=CAGE_peak_at_chr9:62193253..62193260,+ | ||
|id=chr9:62193253..62193260,+ | |id=chr9:62193253..62193260,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.16e-13,1;CL:0000632,1.16e-13,1;CL:0000182,4.98e-11,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.85e-14!22;UBERON:0007499!3.85e-14!22;UBERON:0006925!3.85e-14!22;UBERON:0009497!3.85e-14!22;UBERON:0000015!3.85e-14!22;UBERON:0002423!3.85e-14!22;UBERON:0006235!3.85e-14!22;UBERON:0008835!3.85e-14!22;UBERON:0003894!3.85e-14!22;UBERON:0004161!3.85e-14!22;UBERON:0008836!3.85e-14!22;UBERON:0005172!1.91e-13!49;UBERON:0005173!1.91e-13!49;UBERON:0002417!1.91e-13!49;UBERON:0000916!1.91e-13!49;UBERON:0009854!2.11e-13!23;UBERON:0009856!2.11e-13!23;UBERON:0002365!4.18e-12!25;UBERON:0002330!4.18e-12!25;UBERON:0002368!6.70e-09!60;UBERON:0009569!8.29e-09!66;UBERON:0003914!1.63e-08!47;UBERON:0005256!2.01e-08!47;UBERON:0002530!6.80e-08!65;UBERON:0000949!9.94e-07!72 | |ontology_enrichment_uberon=UBERON:0002107!3.85e-14!22;UBERON:0007499!3.85e-14!22;UBERON:0006925!3.85e-14!22;UBERON:0009497!3.85e-14!22;UBERON:0000015!3.85e-14!22;UBERON:0002423!3.85e-14!22;UBERON:0006235!3.85e-14!22;UBERON:0008835!3.85e-14!22;UBERON:0003894!3.85e-14!22;UBERON:0004161!3.85e-14!22;UBERON:0008836!3.85e-14!22;UBERON:0005172!1.91e-13!49;UBERON:0005173!1.91e-13!49;UBERON:0002417!1.91e-13!49;UBERON:0000916!1.91e-13!49;UBERON:0009854!2.11e-13!23;UBERON:0009856!2.11e-13!23;UBERON:0002365!4.18e-12!25;UBERON:0002330!4.18e-12!25;UBERON:0002368!6.70e-09!60;UBERON:0009569!8.29e-09!66;UBERON:0003914!1.63e-08!47;UBERON:0005256!2.01e-08!47;UBERON:0002530!6.80e-08!65;UBERON:0000949!9.94e-07!72 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.00e-20,22;UBERON:0007499,1.00e-20,22;UBERON:0006925,1.00e-20,22;UBERON:0009497,1.00e-20,22;UBERON:0000015,1.00e-20,22;UBERON:0002423,1.00e-20,22;UBERON:0006235,1.00e-20,22;UBERON:0008835,1.00e-20,22;UBERON:0003894,1.00e-20,22;UBERON:0004161,1.00e-20,22;UBERON:0008836,1.00e-20,22;UBERON:0009854,7.69e-20,23;UBERON:0009856,7.69e-20,23;UBERON:0002365,2.79e-18,25;UBERON:0002330,2.79e-18,25;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0005256,2.89e-10,45;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0003914,7.77e-10,47;UBERON:0009569,1.86e-09,66;UBERON:0003929,1.99e-08,55;UBERON:0005177,6.48e-08,79;UBERON:0002368,9.83e-08,60;UBERON:0002530,3.81e-07,65;UBERON:0000490,4.87e-07,66;UBERON:0002100,5.94e-07,90;UBERON:0005911,9.79e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0.539703191637817,1.94932925234301,1.79210754838934,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0.150722640552623,0,0.502666365318702,0,0.722996784599558,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.31399745568275,1.48076596706161,0,0,0.196558995113203,0,0,0.241177159752417,0,0.575392274901621,0,0,0,0.372140947668503,0.312037673114561,1.51547326768267,3.58794827043824,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0.539703191637817,1.94932925234301,1.79210754838934,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0.150722640552623,0,0.502666365318702,0,0.722996784599558,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.31399745568275,1.48076596706161,0,0,0.196558995113203,0,0,0.241177159752417,0,0.575392274901621,0,0,0,0.372140947668503,0.312037673114561,1.51547326768267,3.58794827043824,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr9:62193253..62193260,+ | |short_description=p@chr9:62193253..62193260,+ | ||
}} | }} |
Latest revision as of 10:55, 5 August 2015
Short description: | p@chr9:62193253..62193260, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:62193253..62193260, + |
Coexpression cluster: | MCL_coexpression_mm9:469 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.16e-13 | 1 |
hepatic stellate cell | 1.16e-13 | 1 |
hepatocyte | 4.98e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.00e-20 | 22 |
epithelial sac | 1.00e-20 | 22 |
digestive gland | 1.00e-20 | 22 |
epithelium of foregut-midgut junction | 1.00e-20 | 22 |
anatomical boundary | 1.00e-20 | 22 |
hepatobiliary system | 1.00e-20 | 22 |
foregut-midgut junction | 1.00e-20 | 22 |
hepatic diverticulum | 1.00e-20 | 22 |
liver primordium | 1.00e-20 | 22 |
septum transversum | 1.00e-20 | 22 |
liver bud | 1.00e-20 | 22 |
digestive tract diverticulum | 7.69e-20 | 23 |
sac | 7.69e-20 | 23 |
exocrine gland | 2.79e-18 | 25 |
exocrine system | 2.79e-18 | 25 |
abdomen element | 1.11e-12 | 49 |
abdominal segment element | 1.11e-12 | 49 |
abdominal segment of trunk | 1.11e-12 | 49 |
abdomen | 1.11e-12 | 49 |
trunk mesenchyme | 2.89e-10 | 45 |
mesenchyme | 3.20e-10 | 61 |
entire embryonic mesenchyme | 3.20e-10 | 61 |
epithelial tube | 7.77e-10 | 47 |
subdivision of trunk | 1.86e-09 | 66 |
gut epithelium | 1.99e-08 | 55 |
trunk region element | 6.48e-08 | 79 |
endocrine gland | 9.83e-08 | 60 |
gland | 3.81e-07 | 65 |
unilaminar epithelium | 4.87e-07 | 66 |
trunk | 5.94e-07 | 90 |
endo-epithelium | 9.79e-07 | 69 |