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FFCP PHASE1:Mm9::chr4:41702405..41702438,+: Difference between revisions

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{{FFCP|EntrezGene=14430|HGNC=|MCL_coexpression_id=3475|UniProt=|association_with_transcript=-192bp_to_ENSMUST00000132760_5end|description=CAGE_peak_1_at_Galt_5end|id=chr4:41702405..41702438,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.15e-12!43;UBERON:0009854!3.64e-11!23;UBERON:0009856!3.64e-11!23;UBERON:0002107!1.15e-10!22;UBERON:0007499!1.15e-10!22;UBERON:0006925!1.15e-10!22;UBERON:0009497!1.15e-10!22;UBERON:0000015!1.15e-10!22;UBERON:0002423!1.15e-10!22;UBERON:0006235!1.15e-10!22;UBERON:0008835!1.15e-10!22;UBERON:0003894!1.15e-10!22;UBERON:0004161!1.15e-10!22;UBERON:0008836!1.15e-10!22;UBERON:0004119!2.62e-08!130;UBERON:0000925!2.62e-08!130;UBERON:0006595!2.62e-08!130;UBERON:0001007!5.35e-08!128;UBERON:0001555!5.35e-08!128;UBERON:0007026!5.35e-08!128;UBERON:0002365!6.02e-08!25;UBERON:0002330!6.02e-08!25;UBERON:0005409!7.19e-08!59;UBERON:0003929!1.14e-07!55;UBERON:0004921!1.62e-07!126;UBERON:0004185!1.62e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.42e-13,31;UBERON:0009854,3.64e-11,23;UBERON:0009856,3.64e-11,23;UBERON:0002107,1.15e-10,22;UBERON:0007499,1.15e-10,22;UBERON:0006925,1.15e-10,22;UBERON:0009497,1.15e-10,22;UBERON:0000015,1.15e-10,22;UBERON:0002423,1.15e-10,22;UBERON:0006235,1.15e-10,22;UBERON:0008835,1.15e-10,22;UBERON:0003894,1.15e-10,22;UBERON:0004161,1.15e-10,22;UBERON:0008836,1.15e-10,22;UBERON:0002365,6.20e-08,25;UBERON:0002330,6.20e-08,25;UBERON:0005409,1.09e-07,47;UBERON:0003929,1.09e-07,55;UBERON:0004119,1.25e-07,118;UBERON:0000925,1.25e-07,118;UBERON:0006595,1.25e-07,118;UBERON:0001007,2.46e-07,116;UBERON:0001555,2.46e-07,116;UBERON:0007026,2.46e-07,116;UBERON:0004921,7.13e-07,114|phase1_expression=4.48416771893423,23.3813523118372,23.6599604482559,40.5302043151152,53.5958431042592,10.2406355866253,12.6150825921584,15.236552166106,30.832730151215,24.3427107374873,6.33506482434368,6.06268408364557,13.5248576645653,12.5885379483356,1.99865857089398,2.83465374345756,1.39912375625629,9.46386496074713,8.08975158273859,6.79023442876848,6.29320347117916,4.96454756004426,3.6567970479451,11.8394392867121,12.15869189656,20.6723507081407,16.3689558540448,16.3758136841276,18.0522248483555,15.6258680451157,14.4124831925948,3.17515336729816,3.69038872550742,0,10.9763615505484,6.31691652362271,11.4334839506927,12.5559489221072,6.2506827561904,8.37637990358077,9.99993529652724,7.5135003345429,7.2826552954673,1.38486499773135,1.01376931219515,0.367093504323363,10.1710874765245,3.05235218932625,5.05278220289285,2.72201858703997,4.75953833526233,0,15.6037823633695,26.1130371124084,26.5514101322547,3.08711323243136,2.57880095944881,2.57836046138721,6.47412674750713,7.40587370980846,5.70448263155561,5.42151251310611,3.55717918444456,23.8473425079571,17.7995945262055,24.1563239081674,10.7856039786626,10.7581125490035,1.45165457231869,1.75507719831198,2.52389953621658,6.56997264128748,6.18431914664518,1.83736198822431,3.45043695665651,5.51531271966013,4.40463523997555,3.19218345212969,2.91852413186863,9.36392642884376,6.67859798297591,5.2091337055676,2.79182999001381,3.93933827022176,4.5839474333043,5.30331453852602,4.6982654663704,8.20157561631323,1.51452386666368,1.73814588245607,18.8411917656091,28.3939879403858,9.51959867190851,30.2233787317178,42.2354671340985,25.5375325645481,12.2186645514624,1.02258193546835,1.55871602761721,0,3.94361575374705,0,0,0,7.79367747640371,6.33399663687746,7.58286667522175,11.6467557313441,6.99132285847364,3.71105347662062,2.60227990149204,3.34912026143355,6.22661842591358,4.06951129492081,4.11560474974967,3.51866455723091,12.3597483867187,4.62717942143717,0.884610551949874,1.45590164952668,4.63767188766826,1.93950101254089,22.3670113461747,7.61230072230023,6.28340120440365,15.3274233125155,3.23500836165985,5.99902730993408,4.82866862877646,4.19413790333504,5.94750783664214,6.15706325353036,4.51943232499919,10.9957646652042,3.74018480207208,8.76102820565891,2.85150218780886,2.48813941220186,1.26361379216837,3.99839526184301,6.11566081924707,2.5289231487682,1.44049703844279,3.61691562805716,3.6739709541717,1.7935920839879,2.62364828767241,7.50239775143145,6.68260778091811,5.8622884852024,4.22282697993477,3.28793598641362,3.89266148915837,4.179025998266,4.11564272815887,5.17489093728082,5.61770549850588,3.86021860672073,4.26245249093389,8.07790512888457,11.7263029990548,7.74266864282364,8.99629995223799,10.0349758191176,8.33042409591843,9.76642567951713,4.29237442239391,7.70651259623319,6.08871444679878,3.77585167381919,4.86412857275134,5.99419948443863,5.04965265169416,6.1734952629771,4.83666881697493,1.44066457330998,17.5121954981413,14.8092317331585,5.54549451391608,6.0381534683714,9.79392706047909,33.2777815628515,41.8070722428356,42.6105402492133,24.6755112003146,36.8925658581784,37.4489461112402,41.7808591286417,36.6532483783946,26.0657628509724,18.8040103390984,18.7192796859105,7.39704813717019,6.62641373136427,13.52492828076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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:14430
|HGNC=
|MCL_coexpression_id=3475
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-192bp_to_ENSMUST00000132760_5end
|cluster_id=chr4:41702405..41702438,+
|description=CAGE_peak_1_at_Galt_5end
|id=chr4:41702405..41702438,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!4.15e-12!43;UBERON:0009854!3.64e-11!23;UBERON:0009856!3.64e-11!23;UBERON:0002107!1.15e-10!22;UBERON:0007499!1.15e-10!22;UBERON:0006925!1.15e-10!22;UBERON:0009497!1.15e-10!22;UBERON:0000015!1.15e-10!22;UBERON:0002423!1.15e-10!22;UBERON:0006235!1.15e-10!22;UBERON:0008835!1.15e-10!22;UBERON:0003894!1.15e-10!22;UBERON:0004161!1.15e-10!22;UBERON:0008836!1.15e-10!22;UBERON:0004119!2.62e-08!130;UBERON:0000925!2.62e-08!130;UBERON:0006595!2.62e-08!130;UBERON:0001007!5.35e-08!128;UBERON:0001555!5.35e-08!128;UBERON:0007026!5.35e-08!128;UBERON:0002365!6.02e-08!25;UBERON:0002330!6.02e-08!25;UBERON:0005409!7.19e-08!59;UBERON:0003929!1.14e-07!55;UBERON:0004921!1.62e-07!126;UBERON:0004185!1.62e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.42e-13,31;UBERON:0009854,3.64e-11,23;UBERON:0009856,3.64e-11,23;UBERON:0002107,1.15e-10,22;UBERON:0007499,1.15e-10,22;UBERON:0006925,1.15e-10,22;UBERON:0009497,1.15e-10,22;UBERON:0000015,1.15e-10,22;UBERON:0002423,1.15e-10,22;UBERON:0006235,1.15e-10,22;UBERON:0008835,1.15e-10,22;UBERON:0003894,1.15e-10,22;UBERON:0004161,1.15e-10,22;UBERON:0008836,1.15e-10,22;UBERON:0002365,6.20e-08,25;UBERON:0002330,6.20e-08,25;UBERON:0005409,1.09e-07,47;UBERON:0003929,1.09e-07,55;UBERON:0004119,1.25e-07,118;UBERON:0000925,1.25e-07,118;UBERON:0006595,1.25e-07,118;UBERON:0001007,2.46e-07,116;UBERON:0001555,2.46e-07,116;UBERON:0007026,2.46e-07,116;UBERON:0004921,7.13e-07,114
|phase1_expression=4.48416771893423,23.3813523118372,23.6599604482559,40.5302043151152,53.5958431042592,10.2406355866253,12.6150825921584,15.236552166106,30.832730151215,24.3427107374873,6.33506482434368,6.06268408364557,13.5248576645653,12.5885379483356,1.99865857089398,2.83465374345756,1.39912375625629,9.46386496074713,8.08975158273859,6.79023442876848,6.29320347117916,4.96454756004426,3.6567970479451,11.8394392867121,12.15869189656,20.6723507081407,16.3689558540448,16.3758136841276,18.0522248483555,15.6258680451157,14.4124831925948,3.17515336729816,3.69038872550742,0,10.9763615505484,6.31691652362271,11.4334839506927,12.5559489221072,6.2506827561904,8.37637990358077,9.99993529652724,7.5135003345429,7.2826552954673,1.38486499773135,1.01376931219515,0.367093504323363,10.1710874765245,3.05235218932625,5.05278220289285,2.72201858703997,4.75953833526233,0,15.6037823633695,26.1130371124084,26.5514101322547,3.08711323243136,2.57880095944881,2.57836046138721,6.47412674750713,7.40587370980846,5.70448263155561,5.42151251310611,3.55717918444456,23.8473425079571,17.7995945262055,24.1563239081674,10.7856039786626,10.7581125490035,1.45165457231869,1.75507719831198,2.52389953621658,6.56997264128748,6.18431914664518,1.83736198822431,3.45043695665651,5.51531271966013,4.40463523997555,3.19218345212969,2.91852413186863,9.36392642884376,6.67859798297591,5.2091337055676,2.79182999001381,3.93933827022176,4.5839474333043,5.30331453852602,4.6982654663704,8.20157561631323,1.51452386666368,1.73814588245607,18.8411917656091,28.3939879403858,9.51959867190851,30.2233787317178,42.2354671340985,25.5375325645481,12.2186645514624,1.02258193546835,1.55871602761721,0,3.94361575374705,0,0,0,7.79367747640371,6.33399663687746,7.58286667522175,11.6467557313441,6.99132285847364,3.71105347662062,2.60227990149204,3.34912026143355,6.22661842591358,4.06951129492081,4.11560474974967,3.51866455723091,12.3597483867187,4.62717942143717,0.884610551949874,1.45590164952668,4.63767188766826,1.93950101254089,22.3670113461747,7.61230072230023,6.28340120440365,15.3274233125155,3.23500836165985,5.99902730993408,4.82866862877646,4.19413790333504,5.94750783664214,6.15706325353036,4.51943232499919,10.9957646652042,3.74018480207208,8.76102820565891,2.85150218780886,2.48813941220186,1.26361379216837,3.99839526184301,6.11566081924707,2.5289231487682,1.44049703844279,3.61691562805716,3.6739709541717,1.7935920839879,2.62364828767241,7.50239775143145,6.68260778091811,5.8622884852024,4.22282697993477,3.28793598641362,3.89266148915837,4.179025998266,4.11564272815887,5.17489093728082,5.61770549850588,3.86021860672073,4.26245249093389,8.07790512888457,11.7263029990548,7.74266864282364,8.99629995223799,10.0349758191176,8.33042409591843,9.76642567951713,4.29237442239391,7.70651259623319,6.08871444679878,3.77585167381919,4.86412857275134,5.99419948443863,5.04965265169416,6.1734952629771,4.83666881697493,1.44066457330998,17.5121954981413,14.8092317331585,5.54549451391608,6.0381534683714,9.79392706047909,33.2777815628515,41.8070722428356,42.6105402492133,24.6755112003146,36.8925658581784,37.4489461112402,41.7808591286417,36.6532483783946,26.0657628509724,18.8040103390984,18.7192796859105,7.39704813717019,6.62641373136427,13.5249282807697,12.0154283428735,13.9645790760691,11.6425461017929,11.1928670709935,19.0417090893687,16.0138702398202,19.6201490635663,22.2339470315362,4.17112764290235,7.66580080941492,10.793381394473,13.1859078902527,27.7353733715279,26.9903402888305,49.4837356415394,33.7241271692074,32.1236853430055,15.814502718009,30.8876986564858,30.8917296383415,29.5517287198121,35.8794827043824,42.4550298799763,4.24932337383191,3.41084541186873,3.09633455239849,2.8856664581782,3.98973422090454,8.20780661464897,8.33152743101048,4.09780660501378,2.36452716159286,1.32878813789265,2.23236676120482,2.45794972073607,2.93564469172023,3.32692834737477,3.01582567878545,4.89515115436839,5.90117127622843,1.65562047782839,3.37156238974363,3.16471553798949,1.14754461763673,2.52470927204373,3.47059041357882,6.63745865304285,5.60100834105277,6.21318874676635,2.89638276307112,2.54768877709949,8.50102473517278,7.59865230569411,6.32460444714438,3.53453448063988,2.55492153374884,3.02711526234334,1.46598263418218,2.63952196756057,10.619611067197,11.4106898992841,8.76738315197778,9.43025398779491,13.8791889653963,8.60818414242997,17.3146956422708,8.72480950746013,7.12994756769443,3.47640433729398,2.10837217149998,4.12542172992747,4.76615448055303,5.221771726908,5.17434735131018,3.21505552547388,2.83744373827638,4.8159580752559,3.29098041204242,5.17590413494819,10.0908834467395,9.10877904714427,2.20528398054962,7.91454014119104,10.333723308538,4.52346936961169,6.68485126417564,8.37118588699812,23.0269860937582,2.78137953015765,4.10090113914846,2.27025554759545,1.66675074632741,1.31857919903284,2.1871076435364,1.37266903923914,4.24946074984638,5.318155188299,5.94259887359022,13.3653886522116,6.01038387804157,5.89626454667861,6.37231510848627,5.85447228840512,9.82631536857799,5.25970950900801,9.25718704123762,7.0674104335688,11.0172727298024,0.621339313086926,0,5.83114529571517,4.46737924234164,2.13896307178452,2.32487682259916,1.85851738039856,3.16864544343536,2.3436789271911,3.56521771047417,0.966336483304024,1.44015003128933,9.16432249821717,3.24360344464263,2.77319584345034,2.98817892848929,6.44496104402933,6.95384741734427,3.24527713703916,4.28299628806274,6.76475214652589,7.54447385884498,7.36031151498936,7.69917257844044,7.31209996466504,8.06450625052826,3.40095575422817,5.10567692760349,11.4833736460129,10.9125000636651,3.86379188064381,2.25218970541418,2.93042598827624,1.71494703263253,3.00943262421218,14.1187960654267,5.52390283808612,13.7494923225455,10.998603669996,12.3314853558716,12.0863023582352,8.10027000278167,6.75481804836331,9.9691329976525,10.3552062350364,2.69847103718859,7.18244772121856,5.46347538413229,8.0225216632537,5.44994222832754,9.92754945630076,11.3345831178824,11.743998262617,9.30665707816264,12.3821633764261,14.7017993936339,9.24269072791773,8.80230170216895,9.53974770832552,9.13223956394251,11.9073422820768,9.03897742369873,6.55891349576597,8.24171801606613,8.97913412819824,8.9146005620208,9.9386451449229,8.82213902805088,7.84870649814574,7.15231291156513,7.36147088657586,10.0610385080025,7.3659519202596,8.82726739998101,8.97827634652382,10.5585166130515,10.2444661670586,10.2307760792422,10.5357052006457,10.6098636039628,3.49734809113124,13.1001700729429,12.6773921888496,4.3996316375834,2.8676884485537,1.15933917810211
|short_description=p1@Galt
}}

Revision as of 11:16, 5 August 2015

Short description:p1@Galt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Galt_5end
Coexpression cluster:MCL_coexpression_mm9:3475
Association with transcript: -192bp_to_ENSMUST00000132760_5end
EntrezGene:14430
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Galt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I523.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.53
CD326+ enterocyte, pool2.CNhs13197.11849-124I453.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.24
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.62
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E730.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F224.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.06
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.52
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.09
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.16
GP2+ M cell, pool1.CNhs13228.11845-124H920.67
GP2+ M cell, pool2.CNhs13231.11846-124I116.37
GP2+ M cell, pool3.CNhs13240.11847-124I216.38
Ileum epithelium, pool1.CNhs13199.10252-104B918.05
Ileum epithelium, pool2.CNhs13232.10253-104C115.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.98
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.11
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A126.55
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C723.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.16
Mouse Microglia, donor1.CNhs12629.11718-123C810.79
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F728.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.22
Mouse hepatocyte, donor6.CNhs13090.11822-124F442.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.65
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A812.36
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H715.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.83
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F16.16
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C66.12
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E26.68
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E98.08
heart, embryo E12.CNhs11015.353-12F511.73
heart, embryo E13.CNhs11013.376-3I97.74
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C810.03
heart, embryo E16.CNhs11021.457-17C68.33
heart, embryo E17.CNhs11025.479-18E59.77
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E37.71
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I65.99
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D26.17
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I317.51
intestine, adult.CNhs10496.178-9A314.81
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D89.79
intestine, embryo E16.CNhs10585.463-22H433.28
intestine, embryo E17.CNhs10582.482-18D341.81
intestine, embryo E18.CNhs10526.1289-20F742.61
intestine, neonate N00.CNhs11126.644-26D124.68
intestine, neonate N01.CNhs11192.1322-23E936.89
intestine, neonate N06.CNhs11102.688-20B837.45
intestine, neonate N07.CNhs11095.720-20F241.78
intestine, neonate N10.CNhs11098.755-23A536.65
intestine, neonate N20.CNhs11187.827-18D126.07
intestine, neonate N25.CNhs11121.1352-25E318.80
intestine, neonate N30.CNhs11131.1384-42G118.72
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F86.63
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C713.96
kidney, neonate N00.CNhs11214.646-21G711.64
kidney, neonate N10.CNhs11206.758-6D511.19
kidney, neonate N20.CNhs11113.832-19I119.04
kidney, neonate N25.CNhs11122.1353-25F316.01
kidney, neonate N30.CNhs11203.1385-42H119.62
liver, adult pregnant day01.CNhs10466.508-5B222.23
liver, embryo E12.CNhs10601.355-15F84.17
liver, embryo E13.CNhs10524.378-3H67.67
liver, embryo E14.CNhs10594.409-16E110.79
liver, embryo E15.CNhs10520.433-16D713.19
liver, embryo E16.CNhs10523.462-17F527.74
liver, embryo E17.CNhs10510.481-18A326.99
liver, embryo E18.CNhs10579.499-43G449.48
liver, neonate N00.CNhs11117.641-24F433.72
liver, neonate N03.CNhs11123.1345-25G232.12
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H230.89
liver, neonate N10.CNhs11115.751-24B930.89
liver, neonate N20.CNhs11220.823-25A329.55
liver, neonate N25.CNhs11198.1368-26H135.88
liver, neonate N30.CNhs11106.1382-42D142.46
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A68.21
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E59.43
pancreas, embryo E17.CNhs10599.1558-45G313.88
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G917.31
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E65.22
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I710.09
placenta, adult pregnant day17.CNhs10464.577-18G39.11
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C37.91
skin, neonate N00.CNhs11124.650-25G410.33
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C48.37
small intestine, neonate N16.CNhs11114.790-21I123.03
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.94
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D46.37
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C69.83
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A99.26
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I111.02
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C16.44
thymus, embryo E18.CNhs10595.1273-19G46.95
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C74.28
thymus, neonate N06.CNhs11197.681-26C46.76
thymus, neonate N07.CNhs11211.713-19D37.54
thymus, neonate N10.CNhs11194.748-24E47.36
thymus, neonate N20.CNhs11186.820-7A27.70
thymus, neonate N25.CNhs11125.1362-25G77.31
thymus, neonate N30.CNhs11132.1393-42G28.06
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.48
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.91
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F29.93
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.56
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.54
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B313.10
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine3.42e-1331
digestive tract diverticulum3.64e-1123
sac3.64e-1123
liver1.15e-1022
epithelial sac1.15e-1022
digestive gland1.15e-1022
epithelium of foregut-midgut junction1.15e-1022
anatomical boundary1.15e-1022
hepatobiliary system1.15e-1022
foregut-midgut junction1.15e-1022
hepatic diverticulum1.15e-1022
liver primordium1.15e-1022
septum transversum1.15e-1022
liver bud1.15e-1022
exocrine gland6.20e-0825
exocrine system6.20e-0825
gastrointestinal system1.09e-0747
gut epithelium1.09e-0755
endoderm-derived structure1.25e-07118
endoderm1.25e-07118
presumptive endoderm1.25e-07118
digestive system2.46e-07116
digestive tract2.46e-07116
primitive gut2.46e-07116
subdivision of digestive tract7.13e-07114
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