FFCP PHASE1:Mm9::chr11:117813775..117813794,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=285 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117813775..117813794,+ | |||
|description=CAGE_peak_at_chr11:117813775..117813794,+ | |description=CAGE_peak_at_chr11:117813775..117813794,+ | ||
|id=chr11:117813775..117813794,+ | |id=chr11:117813775..117813794,+ | ||
|ontology_enrichment_celltype=CL:0002031!8.90e-10!25;CL:0000838!1.29e-09!12;CL:0000988!5.89e-09!32;CL:0002032!5.89e-09!32;CL:0000037!5.89e-09!32;CL:0000566!5.89e-09!32;CL:0000837!5.89e-09!32;CL:0000542!1.04e-08!13;CL:0000051!1.04e-08!13;CL:0000084!1.85e-08!11;CL:0000827!1.85e-08!11;CL:0000791!2.84e-08!9;CL:0000789!2.84e-08!9;CL:0002420!2.84e-08!9;CL:0002419!2.84e-08!9;CL:0000790!2.84e-08!9;CL:0000624!5.06e-07!8;CL:0000553!5.23e-07!6;CL:0000556!5.23e-07!6 | |ontology_enrichment_celltype=CL:0002031!8.90e-10!25;CL:0000838!1.29e-09!12;CL:0000988!5.89e-09!32;CL:0002032!5.89e-09!32;CL:0000037!5.89e-09!32;CL:0000566!5.89e-09!32;CL:0000837!5.89e-09!32;CL:0000542!1.04e-08!13;CL:0000051!1.04e-08!13;CL:0000084!1.85e-08!11;CL:0000827!1.85e-08!11;CL:0000791!2.84e-08!9;CL:0000789!2.84e-08!9;CL:0002420!2.84e-08!9;CL:0002419!2.84e-08!9;CL:0000790!2.84e-08!9;CL:0000624!5.06e-07!8;CL:0000553!5.23e-07!6;CL:0000556!5.23e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.31e-15,6;CL:0000556,4.31e-15,6;CL:0002031,1.92e-10,25;CL:0000050,3.87e-10,9;CL:0000988,5.17e-08,32;CL:0002032,5.17e-08,32;CL:0000037,5.17e-08,32;CL:0000837,5.17e-08,32;CL:0000839,4.53e-07,13;CL:0000624,5.06e-07,8;CL:0000815,8.98e-07,1;CL:0000792,8.98e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.07e-21!48;UBERON:0002390!3.54e-19!45;UBERON:0003061!3.54e-19!45;UBERON:0004177!3.86e-19!29;UBERON:0003408!9.87e-18!24;UBERON:0006562!1.75e-17!24;UBERON:0001557!1.75e-17!24;UBERON:0001042!1.75e-17!24;UBERON:0008814!1.75e-17!24;UBERON:0009145!1.75e-17!24;UBERON:0002370!1.81e-16!23;UBERON:0000974!1.81e-16!23;UBERON:0004807!1.81e-16!23;UBERON:0005058!1.81e-16!23;UBERON:0003351!1.81e-16!23;UBERON:0009113!1.81e-16!23;UBERON:0003295!1.81e-16!23;UBERON:0009722!1.81e-16!23;UBERON:0005562!1.81e-16!23;UBERON:0007690!1.81e-16!23;UBERON:0000072!6.02e-15!27;UBERON:0001004!9.16e-14!42;UBERON:0002405!8.06e-13!70;UBERON:0000065!9.39e-13!41;UBERON:0000063!2.36e-10!35;UBERON:0005057!2.29e-09!51;UBERON:0003081!3.51e-09!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.39e-18,48;UBERON:0002405,5.39e-18,48;UBERON:0002390,3.29e-16,45;UBERON:0003061,3.29e-16,45;UBERON:0004177,2.15e-11,29;UBERON:0005057,2.15e-11,29;UBERON:0002370,3.77e-11,23;UBERON:0000974,3.77e-11,23;UBERON:0004807,3.77e-11,23;UBERON:0005058,3.77e-11,23;UBERON:0003351,3.77e-11,23;UBERON:0009113,3.77e-11,23;UBERON:0003295,3.77e-11,23;UBERON:0009722,3.77e-11,23;UBERON:0005562,3.77e-11,23;UBERON:0007690,3.77e-11,23;UBERON:0006562,1.17e-10,24;UBERON:0003408,1.17e-10,24;UBERON:0001557,1.17e-10,24;UBERON:0001042,1.17e-10,24;UBERON:0008814,1.17e-10,24;UBERON:0009145,1.17e-10,24;UBERON:0000072,2.10e-09,27;UBERON:0000077,2.73e-09,35;UBERON:0003081,1.35e-07,87;UBERON:0000029,2.75e-07,1;UBERON:0001097,2.75e-07,1;UBERON:0003968,2.75e-07,1;UBERON:0001467,2.75e-07,1;UBERON:0007811,6.91e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0.281577444303333,0.234064526321993,0,0,6.16322627752341,6.55653018142481,1.66554880907831,0.202475267389826,0,2.20823515750766,3.56497527374921,1.27316895539409,0.0850432901510698,0,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,1.76469446409304,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,9.32176381129818,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0.518054945597687,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0,2.39219233116994,0,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.308132871494482,0.389762468933385,1.25318686967237,0.198681354781265,0.360586348559907,0.886137163047463,1.51449674922221,0.609654453239999,1.00826185136841,0.779663045918019,1.53938946624527,0.584384510907845,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0.281577444303333,0.234064526321993,0,0,6.16322627752341,6.55653018142481,1.66554880907831,0.202475267389826,0,2.20823515750766,3.56497527374921,1.27316895539409,0.0850432901510698,0,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,1.76469446409304,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,9.32176381129818,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0.518054945597687,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0,2.39219233116994,0,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.308132871494482,0.389762468933385,1.25318686967237,0.198681354781265,0.360586348559907,0.886137163047463,1.51449674922221,0.609654453239999,1.00826185136841,0.779663045918019,1.53938946624527,0.584384510907845,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:117813775..117813794,+ | |short_description=p@chr11:117813775..117813794,+ | ||
}} | }} |
Latest revision as of 13:12, 5 August 2015
Short description: | p@chr11:117813775..117813794, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:117813775..117813794, + |
Coexpression cluster: | MCL_coexpression_mm9:285 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.31e-15 | 6 |
megakaryocyte | 4.31e-15 | 6 |
hematopoietic lineage restricted progenitor cell | 1.92e-10 | 25 |
megakaryocyte-erythroid progenitor cell | 3.87e-10 | 9 |
hematopoietic cell | 5.17e-08 | 32 |
hematopoietic oligopotent progenitor cell | 5.17e-08 | 32 |
hematopoietic stem cell | 5.17e-08 | 32 |
hematopoietic multipotent progenitor cell | 5.17e-08 | 32 |
myeloid lineage restricted progenitor cell | 4.53e-07 | 13 |
CD4-positive, alpha-beta T cell | 5.06e-07 | 8 |
regulatory T cell | 8.98e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.39e-18 | 48 |
immune system | 5.39e-18 | 48 |
hematopoietic system | 3.29e-16 | 45 |
blood island | 3.29e-16 | 45 |
hemopoietic organ | 2.15e-11 | 29 |
immune organ | 2.15e-11 | 29 |
thymus | 3.77e-11 | 23 |
neck | 3.77e-11 | 23 |
respiratory system epithelium | 3.77e-11 | 23 |
hemolymphoid system gland | 3.77e-11 | 23 |
pharyngeal epithelium | 3.77e-11 | 23 |
thymic region | 3.77e-11 | 23 |
pharyngeal gland | 3.77e-11 | 23 |
entire pharyngeal arch endoderm | 3.77e-11 | 23 |
thymus primordium | 3.77e-11 | 23 |
early pharyngeal endoderm | 3.77e-11 | 23 |
pharynx | 1.17e-10 | 24 |
gland of gut | 1.17e-10 | 24 |
upper respiratory tract | 1.17e-10 | 24 |
chordate pharynx | 1.17e-10 | 24 |
pharyngeal arch system | 1.17e-10 | 24 |
pharyngeal region of foregut | 1.17e-10 | 24 |
segment of respiratory tract | 2.10e-09 | 27 |
mixed endoderm/mesoderm-derived structure | 2.73e-09 | 35 |
lateral plate mesoderm | 1.35e-07 | 87 |
lymph node | 2.75e-07 | 1 |
axillary lymph node | 2.75e-07 | 1 |
peripheral lymph node | 2.75e-07 | 1 |
shoulder | 2.75e-07 | 1 |
craniocervical region | 6.91e-07 | 36 |