FFCP PHASE1:Mm9::chr4:47104785..47104841,+: Difference between revisions
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{{FFCP|EntrezGene=230145|HGNC=|MCL_coexpression_id=395|UniProt=A2ANU2,Q60GT3,Q8BGT9|association_with_transcript=0bp_to_ENSMUST00000107744,NM_172693,uc008suk.1,uc008sul.1_5end|description=CAGE_peak_1_at_Galnt12_5end|id=chr4:47104785..47104841,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!8.01e-20!59;UBERON:0000160!3.02e-14!43;UBERON:0001007!2.25e-12!128;UBERON:0001555!2.25e-12!128;UBERON:0007026!2.25e-12!128;UBERON:0004119!6.48e-12!130;UBERON:0000925!6.48e-12!130;UBERON:0006595!6.48e-12!130;UBERON:0004921!2.20e-11!126;UBERON:0004185!2.20e-11!126;UBERON:0000344!1.75e-09!15;UBERON:0001242!3.46e-08!13;UBERON:0000060!3.46e-08!13;UBERON:0001262!3.46e-08!13;UBERON:0004786!3.46e-08!13;UBERON:0004923!3.07e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.65e-20,47;UBERON:0000160,1.35e-14,31;UBERON:0001007,1.16e-11,116;UBERON:0001555,1.16e-11,116;UBERON:0007026,1.16e-11,116;UBERON:0004119,3.11e-11,118;UBERON:0000925,3.11e-11,118;UBERON:0006595,3.11e-11,118;UBERON:0004921,1.12e-10,114;UBERON:0000344,9.37e-10,15;UBERON:0001242,2.05e-08,13;UBERON:0001262,2.05e-08,13;UBERON:0004786,2.05e-08,13;UBERON:0004923,1.49e-07,24|phase1_expression=1.76163731815273,12.563114675017,23.6599604482559,4.83942738090928,8.5152274090879,83.2681188682973,75.9241081935458,17.3025253411712,2.53419699873,3.27690336850791,0.513653904676515,1.99430397488341,15.9216678836021,20.3689537636264,3.33109761815663,2.83465374345756,0,8.04428521663506,9.04955261797876,11.8829102503448,4.42225108785563,2.48227378002213,1.56719873483361,33.5984087866154,43.5877634027623,28.137366241636,50.8299155467708,45.2489588640367,43.3253396360533,33.7720373878307,60.0889683875876,0,0,0,19.6419101430867,20.4468613790946,22.2544598325982,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.917733760808408,0,0.65407546914134,0,0.58328969722285,1.53985063787899,0,7.88578248471361,15.9579671242496,20.1656279485478,1.02903774414379,1.14613375975503,0.515672092277442,0.606949382578793,0,1.26766280701236,3.72728985276045,1.77858959222228,2.6996991518442,3.9554654502679,6.3943210345149,5.39280198933128,1.53687322128622,0.103689612308478,0.270011876663381,0,0.285650984403804,1.10434270475807,0.122490799214954,0.191690942036473,0,2.20231761998777,1.14918604276669,1.22885226604995,0.395658863190582,1.28082701043374,1.04182674111352,1.11673199600552,2.25105044012672,1.83357897332172,0.589257170947335,0.711858403995515,0.186399445825301,0.832988126665025,0.906858721281426,1.73918693221007,0,0,0,0,0,3.5111105032938,0,0.259786004602869,0,2.81686839553361,0,0,0,8.22665955842614,9.62767488805375,10.6160133453104,7.87868770061514,10.3575153458869,2.67195850316685,1.04091196059682,0.608930956624282,0.691846491768175,1.50722640552623,0.823120949949934,0.879666139307728,0.247194967734374,1.15679485535929,2.65383165584962,1.61766849947409,1.76673214768315,2.42437626567611,37.2783522436244,0.292780797011547,0.41889341362691,17.3710797541842,1.1981512450592,1.19980546198682,1.27070227073065,0.449371918214468,0,0.251308704225729,1.21677024134594,0.767146371990992,0.62336413367868,0.486723789203273,4.48093200941392,6.59356944233493,25.7777213602348,2.10441855886474,2.73252930221678,2.5289231487682,0.900310649026746,1.9591626318643,1.15662048557257,1.0249097622788,1.87403449119458,1.29351685369508,0.646703978798527,1.51284864134255,0.527853372491847,2.41115305670332,1.66828349535359,1.0447564995665,0.823128545631774,2.38841120182192,0,0,0,0.621377317606506,0.469052119962192,0.540186184383045,0.473489471170421,1.18058539048442,0.925602677324269,0.697601834251224,1.3413670069981,0.934122738937356,1.97471819896177,0.492502392237286,0.162137619091711,0.730999937126662,0.658650345873152,0.268412837520744,1.68231958851302,0.411618449517138,10.9038198384653,11.6358249331959,0.426576501070468,3.25131340604614,5.67016829817211,7.26060688644033,8.89512175379481,9.89173255785308,16.6085171540579,13.0112174231969,16.3367885720175,14.9217354030863,16.182019230887,18.8752075817387,25.5042898852139,20.7106924184542,2.46568271239006,2.05647322697512,1.1270773567308,3.46207257337034,2.90928730751439,3.15611189506434,3.35153646758564,1.91893192373483,3.29697328466887,2.22114895059241,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.810676133875177,0.274561413188081,0,1.11642284300551,0.624075346229121,0.252578877947112,0,0.482443521363367,3.51031061316549,0.757965647081939,0.651859905768103,3.05541154395339,1.64283173801951,3.1826188913945,1.19021820443007,2.92700471786698,1.10344600874334,0.8858587585951,1.91345722388985,1.80249646187312,2.41758974612254,2.02508682014116,0,2.17562273527484,5.90117127622843,1.93155722413313,0.963303539926752,1.52375192569864,1.3114795630134,0.252470927204373,0.631016438832513,1.56175497718655,0.646270193198397,1.19484398976276,0.445597348164788,0.8492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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:230145 | |||
|HGNC= | |||
|MCL_coexpression_id=395 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ANU2,uniprot:Q60GT3,uniprot:Q8BGT9 | |||
|association_with_transcript=0bp_to_ENSMUST00000107744,NM_172693,uc008suk.1,uc008sul.1_5end | |||
|cluster_id=chr4:47104785..47104841,+ | |||
|description=CAGE_peak_1_at_Galnt12_5end | |||
|id=chr4:47104785..47104841,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.01e-20!59;UBERON:0000160!3.02e-14!43;UBERON:0001007!2.25e-12!128;UBERON:0001555!2.25e-12!128;UBERON:0007026!2.25e-12!128;UBERON:0004119!6.48e-12!130;UBERON:0000925!6.48e-12!130;UBERON:0006595!6.48e-12!130;UBERON:0004921!2.20e-11!126;UBERON:0004185!2.20e-11!126;UBERON:0000344!1.75e-09!15;UBERON:0001242!3.46e-08!13;UBERON:0000060!3.46e-08!13;UBERON:0001262!3.46e-08!13;UBERON:0004786!3.46e-08!13;UBERON:0004923!3.07e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.65e-20,47;UBERON:0000160,1.35e-14,31;UBERON:0001007,1.16e-11,116;UBERON:0001555,1.16e-11,116;UBERON:0007026,1.16e-11,116;UBERON:0004119,3.11e-11,118;UBERON:0000925,3.11e-11,118;UBERON:0006595,3.11e-11,118;UBERON:0004921,1.12e-10,114;UBERON:0000344,9.37e-10,15;UBERON:0001242,2.05e-08,13;UBERON:0001262,2.05e-08,13;UBERON:0004786,2.05e-08,13;UBERON:0004923,1.49e-07,24 | |||
|phase1_expression=1.76163731815273,12.563114675017,23.6599604482559,4.83942738090928,8.5152274090879,83.2681188682973,75.9241081935458,17.3025253411712,2.53419699873,3.27690336850791,0.513653904676515,1.99430397488341,15.9216678836021,20.3689537636264,3.33109761815663,2.83465374345756,0,8.04428521663506,9.04955261797876,11.8829102503448,4.42225108785563,2.48227378002213,1.56719873483361,33.5984087866154,43.5877634027623,28.137366241636,50.8299155467708,45.2489588640367,43.3253396360533,33.7720373878307,60.0889683875876,0,0,0,19.6419101430867,20.4468613790946,22.2544598325982,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.917733760808408,0,0.65407546914134,0,0.58328969722285,1.53985063787899,0,7.88578248471361,15.9579671242496,20.1656279485478,1.02903774414379,1.14613375975503,0.515672092277442,0.606949382578793,0,1.26766280701236,3.72728985276045,1.77858959222228,2.6996991518442,3.9554654502679,6.3943210345149,5.39280198933128,1.53687322128622,0.103689612308478,0.270011876663381,0,0.285650984403804,1.10434270475807,0.122490799214954,0.191690942036473,0,2.20231761998777,1.14918604276669,1.22885226604995,0.395658863190582,1.28082701043374,1.04182674111352,1.11673199600552,2.25105044012672,1.83357897332172,0.589257170947335,0.711858403995515,0.186399445825301,0.832988126665025,0.906858721281426,1.73918693221007,0,0,0,0,0,3.5111105032938,0,0.259786004602869,0,2.81686839553361,0,0,0,8.22665955842614,9.62767488805375,10.6160133453104,7.87868770061514,10.3575153458869,2.67195850316685,1.04091196059682,0.608930956624282,0.691846491768175,1.50722640552623,0.823120949949934,0.879666139307728,0.247194967734374,1.15679485535929,2.65383165584962,1.61766849947409,1.76673214768315,2.42437626567611,37.2783522436244,0.292780797011547,0.41889341362691,17.3710797541842,1.1981512450592,1.19980546198682,1.27070227073065,0.449371918214468,0,0.251308704225729,1.21677024134594,0.767146371990992,0.62336413367868,0.486723789203273,4.48093200941392,6.59356944233493,25.7777213602348,2.10441855886474,2.73252930221678,2.5289231487682,0.900310649026746,1.9591626318643,1.15662048557257,1.0249097622788,1.87403449119458,1.29351685369508,0.646703978798527,1.51284864134255,0.527853372491847,2.41115305670332,1.66828349535359,1.0447564995665,0.823128545631774,2.38841120182192,0,0,0,0.621377317606506,0.469052119962192,0.540186184383045,0.473489471170421,1.18058539048442,0.925602677324269,0.697601834251224,1.3413670069981,0.934122738937356,1.97471819896177,0.492502392237286,0.162137619091711,0.730999937126662,0.658650345873152,0.268412837520744,1.68231958851302,0.411618449517138,10.9038198384653,11.6358249331959,0.426576501070468,3.25131340604614,5.67016829817211,7.26060688644033,8.89512175379481,9.89173255785308,16.6085171540579,13.0112174231969,16.3367885720175,14.9217354030863,16.182019230887,18.8752075817387,25.5042898852139,20.7106924184542,2.46568271239006,2.05647322697512,1.1270773567308,3.46207257337034,2.90928730751439,3.15611189506434,3.35153646758564,1.91893192373483,3.29697328466887,2.22114895059241,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.810676133875177,0.274561413188081,0,1.11642284300551,0.624075346229121,0.252578877947112,0,0.482443521363367,3.51031061316549,0.757965647081939,0.651859905768103,3.05541154395339,1.64283173801951,3.1826188913945,1.19021820443007,2.92700471786698,1.10344600874334,0.8858587585951,1.91345722388985,1.80249646187312,2.41758974612254,2.02508682014116,0,2.17562273527484,5.90117127622843,1.93155722413313,0.963303539926752,1.52375192569864,1.3114795630134,0.252470927204373,0.631016438832513,1.56175497718655,0.646270193198397,1.19484398976276,0.445597348164788,0.849229592366497,1.21443210502468,1.75353514746787,2.76701444562566,0.321321316421807,4.40014264145633,6.41036173202119,7.81857404897165,7.9185659026817,0,5.09839335925461,8.16273603804828,9.43025398779491,5.90603785761546,5.53383266299069,6.71913562237375,3.27180356529755,6.77345018930971,0.948110273807448,4.21674434299995,2.06271086496374,9.19186935535228,1.62054984628179,1.16422815404479,2.35770738534752,2.30542303734956,4.63758925765383,3.9491764944509,6.39376393140658,2.11204537257339,0.21183207086382,0.220528398054962,3.62749756471256,1.77610869365496,1.14594557363496,0.238744688006273,0.164140899745061,12.2421951384537,1.29797711407357,5.63873906632914,2.88941615148511,2.59272338317596,3.20226376907975,3.14396723758358,3.20289442489132,2.71965487990169,4.05859211738608,4.97519905695926,25.7761066864081,2.37251995185852,9.75933442208874,16.848833168201,23.8360657456494,18.3424553546789,18.2066867619508,21.5725519443127,23.8197907205467,50.679454557091,10.5627683224777,1.69107881605257,0.897099276263873,1.32366792365678,1.94451188344048,2.0665571756437,1.520605129417,1.29092962510329,3.6457227756306,5.97698263226552,3.8653459332161,1.44015003128933,16.7485893932934,9.12263468805739,7.80603274452687,13.6416864126685,15.0382424360684,13.112969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| |||
|short_description=p1@Galnt12 | |||
}} |
Revision as of 13:19, 5 August 2015
Short description: | p1@Galnt12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Galnt12_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | 0bp_to_ENSMUST00000107744, NM_172693, uc008suk.1, uc008sul.1_5end |
EntrezGene: | 230145 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.65e-20 | 47 |
intestine | 1.35e-14 | 31 |
digestive system | 1.16e-11 | 116 |
digestive tract | 1.16e-11 | 116 |
primitive gut | 1.16e-11 | 116 |
endoderm-derived structure | 3.11e-11 | 118 |
endoderm | 3.11e-11 | 118 |
presumptive endoderm | 3.11e-11 | 118 |
subdivision of digestive tract | 1.12e-10 | 114 |
mucosa | 9.37e-10 | 15 |
intestinal mucosa | 2.05e-08 | 13 |
wall of intestine | 2.05e-08 | 13 |
gastrointestinal system mucosa | 2.05e-08 | 13 |
organ component layer | 1.49e-07 | 24 |