FFCP PHASE1:Mm9::chr1:23768842..23768857,+: Difference between revisions
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{{FFCP|EntrezGene=280645|HGNC=|MCL_coexpression_id=87|UniProt=P59270|association_with_transcript=0bp_to_ENSMUST00000140583_5end|description=CAGE_peak_1_at_B3gat2_5end|id=chr1:23768842..23768857,+|ontology_enrichment_celltype=CL:0000117!6.67e-19!23;CL:0000337!6.67e-19!23;CL:0000540!8.02e-11!33;CL:0000047!8.02e-11!33;CL:0000031!8.02e-11!33;CL:0000404!8.02e-11!33;CL:0000221!3.69e-08!44;CL:0000133!3.69e-08!44;CL:0002319!5.45e-08!43;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.73e-24,23;CL:0000337,2.73e-24,23;CL:0000540,1.66e-14,33;CL:0000047,1.66e-14,33;CL:0000031,1.66e-14,33;CL:0000404,1.66e-14,33;CL:0000393,4.02e-11,39;CL:0000211,4.02e-11,39;CL:0002319,2.91e-10,43;CL:0000221,7.31e-10,44;CL:0000133,7.31e-10,44;CL:0002609,3.83e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.77e-19!71;UBERON:0003075!1.77e-19!71;UBERON:0007284!1.77e-19!71;UBERON:0000033!5.58e-19!63;UBERON:0001049!1.04e-18!52;UBERON:0005068!1.04e-18!52;UBERON:0006241!1.04e-18!52;UBERON:0007135!1.04e-18!52;UBERON:0001017!2.85e-18!73;UBERON:0005743!2.85e-18!73;UBERON:0003056!3.37e-18!49;UBERON:0002020!6.62e-18!34;UBERON:0000073!3.10e-17!75;UBERON:0001016!3.10e-17!75;UBERON:0004121!8.20e-17!102;UBERON:0000924!8.20e-17!102;UBERON:0006601!8.20e-17!102;UBERON:0000955!4.42e-16!50;UBERON:0006238!4.42e-16!50;UBERON:0002616!9.73e-16!49;UBERON:0003080!1.08e-13!40;UBERON:0002791!1.75e-13!29;UBERON:0003528!1.75e-13!29;UBERON:0001893!1.75e-13!29;UBERON:0002780!2.90e-13!39;UBERON:0001890!2.90e-13!39;UBERON:0006240!2.90e-13!39;UBERON:0007811!1.78e-10!86;UBERON:0000153!5.32e-10!94;UBERON:0000489!2.54e-09!21;UBERON:0000956!1.06e-08!21;UBERON:0001869!1.06e-08!21;UBERON:0000203!1.06e-08!21;UBERON:0002240!1.00e-06!6;UBERON:0005174!1.00e-06!6;UBERON:0001137!1.00e-06!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.95e-21,34;UBERON:0002346,1.92e-19,64;UBERON:0003075,1.92e-19,64;UBERON:0007284,1.92e-19,64;UBERON:0000073,2.67e-19,54;UBERON:0001049,1.00e-17,52;UBERON:0005068,1.00e-17,52;UBERON:0006241,1.00e-17,52;UBERON:0007135,1.00e-17,52;UBERON:0001017,1.05e-16,73;UBERON:0001016,6.44e-16,75;UBERON:0003056,1.22e-15,49;UBERON:0003528,1.57e-15,29;UBERON:0002791,1.57e-15,29;UBERON:0001893,1.57e-15,29;UBERON:0010371,1.76e-15,73;UBERON:0004121,2.44e-15,95;UBERON:0000924,2.44e-15,95;UBERON:0006601,2.44e-15,95;UBERON:0003080,1.43e-12,40;UBERON:0002780,4.96e-12,39;UBERON:0001890,4.96e-12,39;UBERON:0006240,4.96e-12,39;UBERON:0002616,5.06e-12,46;UBERON:0000955,1.37e-11,47;UBERON:0006238,1.37e-11,47;UBERON:0000489,6.05e-11,21;UBERON:0000956,4.86e-10,21;UBERON:0001869,4.86e-10,21;UBERON:0000203,4.86e-10,21;UBERON:0010314,8.23e-10,92;UBERON:0002240,9.50e-09,6;UBERON:0005174,9.50e-09,6;UBERON:0001137,9.50e-09,6;UBERON:0001948,6.98e-08,5;UBERON:0002315,6.98e-08,5;UBERON:0002619,8.76e-08,17;UBERON:0002420,5.97e-07,8;UBERON:0007245,5.97e-07,8;UBERON:0010009,5.97e-07,8;UBERON:0010011,5.97e-07,8;UBERON:0000454,5.97e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,7.08107613008592,7.40587370980846,5.07065122804943,0,0,0,0,0,0.898800331555214,1.15265491596466,8.91730665852908,6.21027316325777,9.04397333810943,16.8534080798244,15.2399293256613,3.55223317723367,4.31304619582064,4.5960939330501,3.30347642998166,1.91531007127782,1.84327839907492,7.25374582516066,11.7104183811084,5.73004707612436,0.279182999001381,2.8138130501584,1.68078072554491,27.1058298635774,21.0710087582672,20.1311401491325,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0.281686839553361,0,0,0,0,0,0,1.7127581957859,0,0,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,2.72280718857492,0,0,0,0,1.3481157546434,1.37250180845588,3.8952849154988,0.695297280769106,0,2.90903262383384,1.62241263067758,0.611036183101898,0,0,0.210441855886474,0.910843100738926,2.06911893990126,2.70093194708024,2.26057226753573,2.38127747029647,2.69038812598185,2.43624483855295,0.517406741478031,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,3.70456604565424,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,1.13800740571849,0.913988100877831,2.25415471346161,4.2766778847516,3.49114476901726,1.82353131714828,8.15751328902919,12.5468625782662,9.57692239832386,4.68909222902842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.820481806145422,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0.712262414669021,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0.532020700926821,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0.180938774784468,0,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,2.06223818812425,1.37016503954128,1.5107877947794,2.02506750069542,0,1.35942722695261,1.03552062350364,0.31136204275253,0.399024873401031,0.853668028770671,0.972426868273176,1.67690530102386,1.65459157605013,1.11123363900808,1.23621034343337,1.60459604795908,1.26348605881899,1.01391719956096,1.13175804831646,0.749132059759059,1.28050304809739,1.89537047553524,1.42888107384922,1.15884325944855,1.35036454324594,1.23625770240992,1.47198920134397,1.37147700954166,1.59728225543404,1.66905332963125,0.726732083161643,0.846984423737976,1.01537529470012,1.46342378298218,1.31534855718921,1.62964936615034,0.561142271657738,1.18635018124174,2.36410757701352,2.45538625901814,1.70430525304563,1.15743966588685,2.49810577937946,0.701794825336225,0.859484216193193,0.765153328275374,0.661774257358546,0|short_description=p1@B3gat2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:280645 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P59270 | |||
|association_with_transcript=0bp_to_ENSMUST00000140583_5end | |||
|cluster_id=chr1:23768842..23768857,+ | |||
|description=CAGE_peak_1_at_B3gat2_5end | |||
|id=chr1:23768842..23768857,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.67e-19!23;CL:0000337!6.67e-19!23;CL:0000540!8.02e-11!33;CL:0000047!8.02e-11!33;CL:0000031!8.02e-11!33;CL:0000404!8.02e-11!33;CL:0000221!3.69e-08!44;CL:0000133!3.69e-08!44;CL:0002319!5.45e-08!43;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.73e-24,23;CL:0000337,2.73e-24,23;CL:0000540,1.66e-14,33;CL:0000047,1.66e-14,33;CL:0000031,1.66e-14,33;CL:0000404,1.66e-14,33;CL:0000393,4.02e-11,39;CL:0000211,4.02e-11,39;CL:0002319,2.91e-10,43;CL:0000221,7.31e-10,44;CL:0000133,7.31e-10,44;CL:0002609,3.83e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.77e-19!71;UBERON:0003075!1.77e-19!71;UBERON:0007284!1.77e-19!71;UBERON:0000033!5.58e-19!63;UBERON:0001049!1.04e-18!52;UBERON:0005068!1.04e-18!52;UBERON:0006241!1.04e-18!52;UBERON:0007135!1.04e-18!52;UBERON:0001017!2.85e-18!73;UBERON:0005743!2.85e-18!73;UBERON:0003056!3.37e-18!49;UBERON:0002020!6.62e-18!34;UBERON:0000073!3.10e-17!75;UBERON:0001016!3.10e-17!75;UBERON:0004121!8.20e-17!102;UBERON:0000924!8.20e-17!102;UBERON:0006601!8.20e-17!102;UBERON:0000955!4.42e-16!50;UBERON:0006238!4.42e-16!50;UBERON:0002616!9.73e-16!49;UBERON:0003080!1.08e-13!40;UBERON:0002791!1.75e-13!29;UBERON:0003528!1.75e-13!29;UBERON:0001893!1.75e-13!29;UBERON:0002780!2.90e-13!39;UBERON:0001890!2.90e-13!39;UBERON:0006240!2.90e-13!39;UBERON:0007811!1.78e-10!86;UBERON:0000153!5.32e-10!94;UBERON:0000489!2.54e-09!21;UBERON:0000956!1.06e-08!21;UBERON:0001869!1.06e-08!21;UBERON:0000203!1.06e-08!21;UBERON:0002240!1.00e-06!6;UBERON:0005174!1.00e-06!6;UBERON:0001137!1.00e-06!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.95e-21,34;UBERON:0002346,1.92e-19,64;UBERON:0003075,1.92e-19,64;UBERON:0007284,1.92e-19,64;UBERON:0000073,2.67e-19,54;UBERON:0001049,1.00e-17,52;UBERON:0005068,1.00e-17,52;UBERON:0006241,1.00e-17,52;UBERON:0007135,1.00e-17,52;UBERON:0001017,1.05e-16,73;UBERON:0001016,6.44e-16,75;UBERON:0003056,1.22e-15,49;UBERON:0003528,1.57e-15,29;UBERON:0002791,1.57e-15,29;UBERON:0001893,1.57e-15,29;UBERON:0010371,1.76e-15,73;UBERON:0004121,2.44e-15,95;UBERON:0000924,2.44e-15,95;UBERON:0006601,2.44e-15,95;UBERON:0003080,1.43e-12,40;UBERON:0002780,4.96e-12,39;UBERON:0001890,4.96e-12,39;UBERON:0006240,4.96e-12,39;UBERON:0002616,5.06e-12,46;UBERON:0000955,1.37e-11,47;UBERON:0006238,1.37e-11,47;UBERON:0000489,6.05e-11,21;UBERON:0000956,4.86e-10,21;UBERON:0001869,4.86e-10,21;UBERON:0000203,4.86e-10,21;UBERON:0010314,8.23e-10,92;UBERON:0002240,9.50e-09,6;UBERON:0005174,9.50e-09,6;UBERON:0001137,9.50e-09,6;UBERON:0001948,6.98e-08,5;UBERON:0002315,6.98e-08,5;UBERON:0002619,8.76e-08,17;UBERON:0002420,5.97e-07,8;UBERON:0007245,5.97e-07,8;UBERON:0010009,5.97e-07,8;UBERON:0010011,5.97e-07,8;UBERON:0000454,5.97e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,7.08107613008592,7.40587370980846,5.07065122804943,0,0,0,0,0,0.898800331555214,1.15265491596466,8.91730665852908,6.21027316325777,9.04397333810943,16.8534080798244,15.2399293256613,3.55223317723367,4.31304619582064,4.5960939330501,3.30347642998166,1.91531007127782,1.84327839907492,7.25374582516066,11.7104183811084,5.73004707612436,0.279182999001381,2.8138130501584,1.68078072554491,27.1058298635774,21.0710087582672,20.1311401491325,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0.281686839553361,0,0,0,0,0,0,1.7127581957859,0,0,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,2.72280718857492,0,0,0,0,1.3481157546434,1.37250180845588,3.8952849154988,0.695297280769106,0,2.90903262383384,1.62241263067758,0.611036183101898,0,0,0.210441855886474,0.910843100738926,2.06911893990126,2.70093194708024,2.26057226753573,2.38127747029647,2.69038812598185,2.43624483855295,0.517406741478031,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,3.70456604565424,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,1.13800740571849,0.913988100877831,2.25415471346161,4.2766778847516,3.49114476901726,1.82353131714828,8.15751328902919,12.5468625782662,9.57692239832386,4.68909222902842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.820481806145422,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0.712262414669021,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0.532020700926821,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0.180938774784468,0,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,2.06223818812425,1.37016503954128,1.5107877947794,2.02506750069542,0,1.35942722695261,1.03552062350364,0.31136204275253,0.399024873401031,0.853668028770671,0.972426868273176,1.67690530102386,1.65459157605013,1.11123363900808,1.23621034343337,1.60459604795908,1.26348605881899,1.01391719956096,1.13175804831646,0.749132059759059,1.28050304809739,1.89537047553524,1.42888107384922,1.15884325944855,1.35036454324594,1.23625770240992,1.47198920134397,1.37147700954166,1.59728225543404,1.66905332963125,0.726732083161643,0.846984423737976,1.01537529470012,1.46342378298218,1.31534855718921,1.62964936615034,0.561142271657738,1.18635018124174,2.36410757701352,2.45538625901814,1.70430525304563,1.15743966588685,2.49810577937946,0.701794825336225,0.859484216193193,0.765153328275374,0.661774257358546,0 | |||
|short_description=p1@B3gat2 | |||
}} |
Revision as of 13:27, 5 August 2015
Short description: | p1@B3gat2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B3gat2_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 0bp_to_ENSMUST00000140583_5end |
EntrezGene: | 280645 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.73e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.73e-24 | 23 |
neuron | 1.66e-14 | 33 |
neuronal stem cell | 1.66e-14 | 33 |
neuroblast | 1.66e-14 | 33 |
electrically signaling cell | 1.66e-14 | 33 |
electrically responsive cell | 4.02e-11 | 39 |
electrically active cell | 4.02e-11 | 39 |
neural cell | 2.91e-10 | 43 |
ectodermal cell | 7.31e-10 | 44 |
neurectodermal cell | 7.31e-10 | 44 |
neuron of cerebral cortex | 3.83e-08 | 6 |