FFCP PHASE1:Mm9::chr13:105844906..105844927,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=52882|HGNC=|MCL_coexpression_id=1|UniProt=Q8BQP9|association_with_transcript=82bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end|description=CAGE_peak_2_at_Rgs7bp_5end|id=chr13:105844906..105844927,-|ontology_enrichment_celltype=CL:0000117!1.35e-11!23;CL:0000337!1.35e-11!23;CL:0000540!9.33e-11!33;CL:0000047!9.33e-11!33;CL:0000031!9.33e-11!33;CL:0000404!9.33e-11!33;CL:0000393!2.33e-07!39;CL:0000211!2.33e-07!39;CL:0002319!5.04e-07!43;CL:0000221!6.98e-07!44;CL:0000133!6.98e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-15,23;CL:0000337,1.93e-15,23;CL:0000540,5.15e-12,33;CL:0000047,5.15e-12,33;CL:0000031,5.15e-12,33;CL:0000404,5.15e-12,33;CL:0000393,9.52e-09,39;CL:0000211,9.52e-09,39;CL:0002319,7.63e-08,43;CL:0000221,1.81e-07,44;CL:0000133,1.81e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.59e-20!75;UBERON:0001016!1.59e-20!75;UBERON:0001017!2.47e-20!73;UBERON:0005743!2.47e-20!73;UBERON:0004121!9.75e-19!102;UBERON:0000924!9.75e-19!102;UBERON:0006601!9.75e-19!102;UBERON:0001049!1.11e-18!52;UBERON:0005068!1.11e-18!52;UBERON:0006241!1.11e-18!52;UBERON:0007135!1.11e-18!52;UBERON:0000955!7.43e-18!50;UBERON:0006238!7.43e-18!50;UBERON:0002346!1.69e-17!71;UBERON:0003075!1.69e-17!71;UBERON:0007284!1.69e-17!71;UBERON:0002616!2.94e-17!49;UBERON:0000033!4.98e-17!63;UBERON:0002020!3.29e-16!34;UBERON:0003080!2.22e-14!40;UBERON:0003056!2.52e-14!49;UBERON:0002780!8.68e-14!39;UBERON:0001890!8.68e-14!39;UBERON:0006240!8.68e-14!39;UBERON:0002791!1.62e-13!29;UBERON:0003528!1.62e-13!29;UBERON:0001893!1.62e-13!29;UBERON:0000956!1.36e-09!21;UBERON:0001869!1.36e-09!21;UBERON:0000203!1.36e-09!21;UBERON:0000025!2.05e-08!114;UBERON:0004111!4.66e-08!122;UBERON:0002021!6.65e-08!10;UBERON:0000411!6.65e-08!10;UBERON:0001950!6.65e-08!10;UBERON:0002619!8.93e-08!17;UBERON:0000468!1.85e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.59e-26,54;UBERON:0001017,2.28e-24,73;UBERON:0001016,3.29e-24,75;UBERON:0001049,3.48e-24,52;UBERON:0005068,3.48e-24,52;UBERON:0006241,3.48e-24,52;UBERON:0007135,3.48e-24,52;UBERON:0004121,1.87e-22,95;UBERON:0000924,1.87e-22,95;UBERON:0006601,1.87e-22,95;UBERON:0002346,1.96e-22,64;UBERON:0003075,1.96e-22,64;UBERON:0007284,1.96e-22,64;UBERON:0002020,2.59e-22,34;UBERON:0000955,2.15e-20,47;UBERON:0006238,2.15e-20,47;UBERON:0002616,1.33e-19,46;UBERON:0010371,2.42e-19,73;UBERON:0003528,1.44e-18,29;UBERON:0002791,1.44e-18,29;UBERON:0001893,1.44e-18,29;UBERON:0003080,7.50e-18,40;UBERON:0003056,3.00e-17,49;UBERON:0002780,4.75e-17,39;UBERON:0001890,4.75e-17,39;UBERON:0006240,4.75e-17,39;UBERON:0010314,1.53e-15,92;UBERON:0000956,4.05e-13,21;UBERON:0001869,4.05e-13,21;UBERON:0000203,4.05e-13,21;UBERON:0002619,1.33e-10,17;UBERON:0002021,2.45e-10,10;UBERON:0000411,2.45e-10,10;UBERON:0001950,2.45e-10,10;UBERON:0000025,2.39e-08,114;UBERON:0004111,9.86e-08,122;UBERON:0003076,6.09e-07,12;UBERON:0003057,6.09e-07,12|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,7.99406927420056,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0.866554859253824,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.699932108126813,0,0,0,0,0.257259436035947,0.573066879877513,0,3.03474691289397,2.11596391708813,2.53532561402472,0,0,0,0,0,0.299600110518405,0,2.90330914463737,3.24014251996058,1.68259969081106,5.99867067247988,4.8591079009355,2.69479758272899,1.15014565221884,1.83843757322004,38.540558349786,45.8397543725824,37.0191745147547,1.71452174049252,2.47016637726506,2.08365348222704,19.5428099300967,12.9435400307286,19.0997809721013,11.7851434189467,7.40332740155335,5.59198337475902,0.530083353332288,1.73814588245607,1.73918693221007,0.860423876981386,0,0,0,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,1.25602267690966,0.776813650941515,0.742210695324124,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,1.29347577849275,0.376999773989026,1.23597483867187,1.15679485535929,0,0.647067399789637,0,0,0,36.5975996264434,45.6593820853332,0,0,0,0.127070227073065,35.2008002601333,53.9850711325979,9.5497307605777,53.3640662990289,49.0973678074235,41.7653969564716,48.0234138680563,0.712875546952214,0.248813941220186,0,2.10441855886474,0.390361328888111,0,0.540186389416048,0.452114453507145,1.08858398642125,1.40925092313335,2.24884138943349,4.9153640440413,0,0.378212160335639,0,0.43839146485515,0.834141747676794,2.089512999133,1.85203922767149,0.199034266818493,0,0.257347907114715,0.852490498186778,1.03562886267751,1.17263029990548,1.08037236876609,1.42046841351126,0.983821158737019,0.617068451549513,0.930135779001631,0.536546802799238,1.05088808130453,1.6455984991348,0.656669856316381,0.486412857275134,0.292399974850665,1.09775057645525,0.268412837520744,42.2682796613896,5.55684906848136,0,0,0,0.696710015581316,0.515469845288373,1.00841762311671,0.667134131534611,0.951128130562796,0.474529061544512,1.15289268306808,1.50801125280162,0.596869416123452,0.58489226135736,0.898819408654221,0,0.597423819763102,0.189667900953082,1.14248512609729,0,1.22190796707189,0.581857461502877,0.771494018793504,0.442655759869801,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0.823684239564244,1.43768206527355,0,0.312037673114561,0.757736633841335,0.896987067609561,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0,0.704070744865506,0.167506257441816,0,0.780534591431195,2.04925687338048,1.10732344824387,1.91345722388985,0.655453258862952,0.345369963731791,0,0,0.54390568381871,0,0,33.2339721274729,26.4898411698379,0,1.51482556322624,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0,0.566153061577665,2.02405350837447,1.75353514746787,2.37172666767914,27.3123118958536,0.99358059645788,0.35613120733451,0.81443479676788,1.31976098378028,0,0.485561272309963,0.604647113929502,0.754420319023592,0.295301892880773,0.922305443831782,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,1.41872186913819,1.24858172321449,2.46823530903181,0.913394847343798,0,0.21183207086382,0.441056796109924,0.49465875882444,1.77610869365496,2.17126529741361,0.835606408021955,0.328281799490123,0.874442509889552,35.6016579860179,0,0.412773735926445,0.555583582109135,0.376736914009382,0.136694227721025,0.457556346413045,0.169978429993855,0.279902904647316,0,0.954670618015114,0.790839983952838,0.406638934253697,0.324016022465404,0.418176592028937,1.09181281873089,0.269728692769641,0.661227645802687,0,1.03691978633434,0,0,0,0.165458490457098,0.583353565032143,0.387479470433193,0,0.234714477291508,0.5208175393758,0.524296722128554,0.241584120826006,0,0,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0,0,0.116876902181569,1.36038230169127,0,0,0,3.47741269257943,0.563047426353546,0,0.214368379079066,0,42.35638819628,34.9847179745454,38.3839994004396,31.6209855512385,42.4751162257798,47.5898155355511,35.7761925122857,48.6346899482158,46.6736681253731,55.9181136691966,0.726511433089237,0.399024873401031,1.70733605754134,1.21553358534147,1.04806581313991,1.65459157605013,2.66696073361938,2.67845574410562,0.64183841918363,1.01078884705519,1.77435509923168,2.26351609663291,1.77918864192777,2.30490548657529,1.7230640686684,1.90517476513229,2.31768651889711,1.35036454324594,0.412085900803307,1.76638704161277,1.02860775715625,2.30718548007139,0.715308569841963,1.0174249164263,1.41164070622996,1.26921911837515,1.82927972872773,1.57841826862706,2.17286582153379,1.68342681497322,2.01679530811096,2.65962102414021,3.27384834535751,1.08455788830176,2.3148793317737,1.49886346762768,2.10538447600868,3.22306581072447,2.29545998482612,0.441182838239031,0.695603506861264|short_description=p2@Rgs7bp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:52882 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BQP9 | |||
|association_with_transcript=82bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end | |||
|cluster_id=chr13:105844906..105844927,- | |||
|description=CAGE_peak_2_at_Rgs7bp_5end | |||
|id=chr13:105844906..105844927,- | |||
|ontology_enrichment_celltype=CL:0000117!1.35e-11!23;CL:0000337!1.35e-11!23;CL:0000540!9.33e-11!33;CL:0000047!9.33e-11!33;CL:0000031!9.33e-11!33;CL:0000404!9.33e-11!33;CL:0000393!2.33e-07!39;CL:0000211!2.33e-07!39;CL:0002319!5.04e-07!43;CL:0000221!6.98e-07!44;CL:0000133!6.98e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-15,23;CL:0000337,1.93e-15,23;CL:0000540,5.15e-12,33;CL:0000047,5.15e-12,33;CL:0000031,5.15e-12,33;CL:0000404,5.15e-12,33;CL:0000393,9.52e-09,39;CL:0000211,9.52e-09,39;CL:0002319,7.63e-08,43;CL:0000221,1.81e-07,44;CL:0000133,1.81e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.59e-20!75;UBERON:0001016!1.59e-20!75;UBERON:0001017!2.47e-20!73;UBERON:0005743!2.47e-20!73;UBERON:0004121!9.75e-19!102;UBERON:0000924!9.75e-19!102;UBERON:0006601!9.75e-19!102;UBERON:0001049!1.11e-18!52;UBERON:0005068!1.11e-18!52;UBERON:0006241!1.11e-18!52;UBERON:0007135!1.11e-18!52;UBERON:0000955!7.43e-18!50;UBERON:0006238!7.43e-18!50;UBERON:0002346!1.69e-17!71;UBERON:0003075!1.69e-17!71;UBERON:0007284!1.69e-17!71;UBERON:0002616!2.94e-17!49;UBERON:0000033!4.98e-17!63;UBERON:0002020!3.29e-16!34;UBERON:0003080!2.22e-14!40;UBERON:0003056!2.52e-14!49;UBERON:0002780!8.68e-14!39;UBERON:0001890!8.68e-14!39;UBERON:0006240!8.68e-14!39;UBERON:0002791!1.62e-13!29;UBERON:0003528!1.62e-13!29;UBERON:0001893!1.62e-13!29;UBERON:0000956!1.36e-09!21;UBERON:0001869!1.36e-09!21;UBERON:0000203!1.36e-09!21;UBERON:0000025!2.05e-08!114;UBERON:0004111!4.66e-08!122;UBERON:0002021!6.65e-08!10;UBERON:0000411!6.65e-08!10;UBERON:0001950!6.65e-08!10;UBERON:0002619!8.93e-08!17;UBERON:0000468!1.85e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.59e-26,54;UBERON:0001017,2.28e-24,73;UBERON:0001016,3.29e-24,75;UBERON:0001049,3.48e-24,52;UBERON:0005068,3.48e-24,52;UBERON:0006241,3.48e-24,52;UBERON:0007135,3.48e-24,52;UBERON:0004121,1.87e-22,95;UBERON:0000924,1.87e-22,95;UBERON:0006601,1.87e-22,95;UBERON:0002346,1.96e-22,64;UBERON:0003075,1.96e-22,64;UBERON:0007284,1.96e-22,64;UBERON:0002020,2.59e-22,34;UBERON:0000955,2.15e-20,47;UBERON:0006238,2.15e-20,47;UBERON:0002616,1.33e-19,46;UBERON:0010371,2.42e-19,73;UBERON:0003528,1.44e-18,29;UBERON:0002791,1.44e-18,29;UBERON:0001893,1.44e-18,29;UBERON:0003080,7.50e-18,40;UBERON:0003056,3.00e-17,49;UBERON:0002780,4.75e-17,39;UBERON:0001890,4.75e-17,39;UBERON:0006240,4.75e-17,39;UBERON:0010314,1.53e-15,92;UBERON:0000956,4.05e-13,21;UBERON:0001869,4.05e-13,21;UBERON:0000203,4.05e-13,21;UBERON:0002619,1.33e-10,17;UBERON:0002021,2.45e-10,10;UBERON:0000411,2.45e-10,10;UBERON:0001950,2.45e-10,10;UBERON:0000025,2.39e-08,114;UBERON:0004111,9.86e-08,122;UBERON:0003076,6.09e-07,12;UBERON:0003057,6.09e-07,12 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,7.99406927420056,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0.866554859253824,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.699932108126813,0,0,0,0,0.257259436035947,0.573066879877513,0,3.03474691289397,2.11596391708813,2.53532561402472,0,0,0,0,0,0.299600110518405,0,2.90330914463737,3.24014251996058,1.68259969081106,5.99867067247988,4.8591079009355,2.69479758272899,1.15014565221884,1.83843757322004,38.540558349786,45.8397543725824,37.0191745147547,1.71452174049252,2.47016637726506,2.08365348222704,19.5428099300967,12.9435400307286,19.0997809721013,11.7851434189467,7.40332740155335,5.59198337475902,0.530083353332288,1.73814588245607,1.73918693221007,0.860423876981386,0,0,0,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,1.25602267690966,0.776813650941515,0.742210695324124,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,1.29347577849275,0.376999773989026,1.23597483867187,1.15679485535929,0,0.647067399789637,0,0,0,36.5975996264434,45.6593820853332,0,0,0,0.127070227073065,35.2008002601333,53.9850711325979,9.5497307605777,53.3640662990289,49.0973678074235,41.7653969564716,48.0234138680563,0.712875546952214,0.248813941220186,0,2.10441855886474,0.390361328888111,0,0.540186389416048,0.452114453507145,1.08858398642125,1.40925092313335,2.24884138943349,4.9153640440413,0,0.378212160335639,0,0.43839146485515,0.834141747676794,2.089512999133,1.85203922767149,0.199034266818493,0,0.257347907114715,0.852490498186778,1.03562886267751,1.17263029990548,1.08037236876609,1.42046841351126,0.983821158737019,0.617068451549513,0.930135779001631,0.536546802799238,1.05088808130453,1.6455984991348,0.656669856316381,0.486412857275134,0.292399974850665,1.09775057645525,0.268412837520744,42.2682796613896,5.55684906848136,0,0,0,0.696710015581316,0.515469845288373,1.00841762311671,0.667134131534611,0.951128130562796,0.474529061544512,1.15289268306808,1.50801125280162,0.596869416123452,0.58489226135736,0.898819408654221,0,0.597423819763102,0.189667900953082,1.14248512609729,0,1.22190796707189,0.581857461502877,0.771494018793504,0.442655759869801,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0.823684239564244,1.43768206527355,0,0.312037673114561,0.757736633841335,0.896987067609561,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0,0.704070744865506,0.167506257441816,0,0.780534591431195,2.04925687338048,1.10732344824387,1.91345722388985,0.655453258862952,0.345369963731791,0,0,0.54390568381871,0,0,33.2339721274729,26.4898411698379,0,1.51482556322624,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0,0.566153061577665,2.02405350837447,1.75353514746787,2.37172666767914,27.3123118958536,0.99358059645788,0.35613120733451,0.81443479676788,1.31976098378028,0,0.485561272309963,0.604647113929502,0.754420319023592,0.295301892880773,0.922305443831782,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,1.41872186913819,1.24858172321449,2.46823530903181,0.913394847343798,0,0.21183207086382,0.441056796109924,0.49465875882444,1.77610869365496,2.17126529741361,0.835606408021955,0.328281799490123,0.874442509889552,35.6016579860179,0,0.412773735926445,0.555583582109135,0.376736914009382,0.136694227721025,0.457556346413045,0.169978429993855,0.279902904647316,0,0.954670618015114,0.790839983952838,0.406638934253697,0.324016022465404,0.418176592028937,1.09181281873089,0.269728692769641,0.661227645802687,0,1.03691978633434,0,0,0,0.165458490457098,0.583353565032143,0.387479470433193,0,0.234714477291508,0.5208175393758,0.524296722128554,0.241584120826006,0,0,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0,0,0.116876902181569,1.36038230169127,0,0,0,3.47741269257943,0.563047426353546,0,0.214368379079066,0,42.35638819628,34.9847179745454,38.3839994004396,31.6209855512385,42.4751162257798,47.5898155355511,35.7761925122857,48.6346899482158,46.6736681253731,55.9181136691966,0.726511433089237,0.399024873401031,1.70733605754134,1.21553358534147,1.04806581313991,1.65459157605013,2.66696073361938,2.67845574410562,0.64183841918363,1.01078884705519,1.77435509923168,2.26351609663291,1.77918864192777,2.30490548657529,1.7230640686684,1.90517476513229,2.31768651889711,1.35036454324594,0.412085900803307,1.76638704161277,1.02860775715625,2.30718548007139,0.715308569841963,1.0174249164263,1.41164070622996,1.26921911837515,1.82927972872773,1.57841826862706,2.17286582153379,1.68342681497322,2.01679530811096,2.65962102414021,3.27384834535751,1.08455788830176,2.3148793317737,1.49886346762768,2.10538447600868,3.22306581072447,2.29545998482612,0.441182838239031,0.695603506861264 | |||
|short_description=p2@Rgs7bp | |||
}} |
Revision as of 13:49, 5 August 2015
Short description: | p2@Rgs7bp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rgs7bp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 82bp_to_ENSMUST00000063551, NM_029879, uc007rtp.1_5end |
EntrezGene: | 52882 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.93e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.93e-15 | 23 |
neuron | 5.15e-12 | 33 |
neuronal stem cell | 5.15e-12 | 33 |
neuroblast | 5.15e-12 | 33 |
electrically signaling cell | 5.15e-12 | 33 |
electrically responsive cell | 9.52e-09 | 39 |
electrically active cell | 9.52e-09 | 39 |
neural cell | 7.63e-08 | 43 |
ectodermal cell | 1.81e-07 | 44 |
neurectodermal cell | 1.81e-07 | 44 |