FFCP PHASE1:Mm9::chr7:89078700..89078758,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1290 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:89078700..89078758,- | |||
|description=CAGE_peak_at_chr7:89078700..89078758,- | |description=CAGE_peak_at_chr7:89078700..89078758,- | ||
|id=chr7:89078700..89078758,- | |id=chr7:89078700..89078758,- | ||
|ontology_enrichment_celltype=CL:0000117!1.33e-08!23;CL:0000337!1.33e-08!23;CL:0000540!1.88e-07!33;CL:0000047!1.88e-07!33;CL:0000031!1.88e-07!33;CL:0000404!1.88e-07!33;CL:0000393!3.90e-07!39;CL:0000211!3.90e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.33e-08!23;CL:0000337!1.33e-08!23;CL:0000540!1.88e-07!33;CL:0000047!1.88e-07!33;CL:0000031!1.88e-07!33;CL:0000404!1.88e-07!33;CL:0000393!3.90e-07!39;CL:0000211!3.90e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-14,23;CL:0000337,5.05e-14,23;CL:0000540,1.16e-09,33;CL:0000047,1.16e-09,33;CL:0000031,1.16e-09,33;CL:0000404,1.16e-09,33;CL:0000393,6.27e-09,39;CL:0000211,6.27e-09,39;CL:0002319,8.08e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.22e-15!94;UBERON:0007811!6.75e-15!86;UBERON:0001017!1.01e-14!73;UBERON:0005743!1.01e-14!73;UBERON:0000073!1.69e-14!75;UBERON:0001016!1.69e-14!75;UBERON:0001049!4.80e-14!52;UBERON:0005068!4.80e-14!52;UBERON:0006241!4.80e-14!52;UBERON:0007135!4.80e-14!52;UBERON:0000955!2.61e-13!50;UBERON:0006238!2.61e-13!50;UBERON:0002020!8.31e-13!34;UBERON:0002616!9.92e-13!49;UBERON:0000033!7.85e-11!63;UBERON:0003080!2.18e-10!40;UBERON:0002346!2.78e-10!71;UBERON:0003075!2.78e-10!71;UBERON:0007284!2.78e-10!71;UBERON:0002791!2.79e-10!29;UBERON:0003528!2.79e-10!29;UBERON:0001893!2.79e-10!29;UBERON:0002780!5.87e-10!39;UBERON:0001890!5.87e-10!39;UBERON:0006240!5.87e-10!39;UBERON:0004121!8.14e-10!102;UBERON:0000924!8.14e-10!102;UBERON:0006601!8.14e-10!102;UBERON:0003056!6.32e-09!49;UBERON:0002021!4.92e-08!10;UBERON:0000411!4.92e-08!10;UBERON:0001950!4.92e-08!10;UBERON:0002619!7.61e-08!17;UBERON:0000956!1.03e-07!21;UBERON:0001869!1.03e-07!21;UBERON:0000203!1.03e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.31e-22,54;UBERON:0002020,3.09e-22,34;UBERON:0001049,1.30e-20,52;UBERON:0005068,1.30e-20,52;UBERON:0006241,1.30e-20,52;UBERON:0007135,1.30e-20,52;UBERON:0001017,1.41e-20,73;UBERON:0001016,1.30e-19,75;UBERON:0003528,6.95e-18,29;UBERON:0002791,6.95e-18,29;UBERON:0001893,6.95e-18,29;UBERON:0000955,7.64e-17,47;UBERON:0006238,7.64e-17,47;UBERON:0002346,3.39e-16,64;UBERON:0003075,3.39e-16,64;UBERON:0007284,3.39e-16,64;UBERON:0002616,6.20e-16,46;UBERON:0003080,7.87e-16,40;UBERON:0002780,4.10e-15,39;UBERON:0001890,4.10e-15,39;UBERON:0006240,4.10e-15,39;UBERON:0004121,8.70e-14,95;UBERON:0000924,8.70e-14,95;UBERON:0006601,8.70e-14,95;UBERON:0002619,2.71e-13,17;UBERON:0003056,5.89e-13,49;UBERON:0000956,9.91e-13,21;UBERON:0001869,9.91e-13,21;UBERON:0000203,9.91e-13,21;UBERON:0010371,1.25e-12,73;UBERON:0002021,1.70e-12,10;UBERON:0000411,1.70e-12,10;UBERON:0001950,1.70e-12,10;UBERON:0010314,3.95e-08,92 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.645616617207881,14.6420271037733,3.27690336850791,8.21846247482424,1.7549874978974,1.19840510951844,0.0874204024189974,0,0,0,0.315462165358238,0.137114433605739,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,0.811015449756117,1.28482726513177,3.12956537739216,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0,2.17608642603403,4.36921938885203,0.514518872071894,0.286533439938757,0,2.02316460859598,3.1739458756322,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.518448061542388,1.08004750665353,0.210324961351382,2.85650984403804,2.87129103237098,1.10241719293459,2.01275489138296,2.75765635983006,4.40463523997555,3.19218345212969,2.91852413186863,5.01167893374737,2.47016637726506,3.64639359389732,0,5.6276261003168,2.75036845998258,4.41942878210502,2.42031857358475,2.79599168737951,0.757261933331841,0.302286240427142,2.31891590961342,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,0.35333957451034,0.281686839553361,1.28326477414318,2.54805239706646,0,0,0,0.505524445014783,0.68510327831436,3.10725460376606,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0,0.23517741427141,0.376999773989026,0.247194967734374,1.3013942122792,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,2.39665023047716,1.37250180845588,4.64921102817598,5.73620256634512,9.2057564638919,3.1168206683934,4.05603157669394,0.81471491080253,0.373220911830279,1.0108910337347,0.210441855886474,0.390361328888111,0.229902104433473,0,1.05493372485001,0.544291993210623,0.768682321709099,0.468508622798644,1.29351685369508,0.431135985865684,1.32374256117473,1.58356011747554,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0,0,0,0,0.621377317606506,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.810688095458557,0.584799949701329,1.09775057645525,0.671032093801859,2.94405927989778,2.46971069710283,0.660837565967596,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,0.605050573870028,0.22237804384487,0,0.474529061544512,0.164698954724011,0.754005626400808,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.49095073923223,0.316182685621286,0.295220295959204,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0,0.335012514883631,0,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0,0,1.44495530989013,0.937693492737625,8.52461715958712,0,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0.891194696329576,0.566153061577665,0,1.16902343164525,1.18586333383957,5.14114106274891,0.425820255624806,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.948110273807448,0,2.06271086496374,2.7235168460303,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0.356737635204141,0.987294123612726,0.608929898229199,0.23467170806371,0,4.19003956304428,0.65954501176592,0.484393280087717,0.542816324353403,0.477489376012546,0.820704498725306,0.582961673259701,1.66882771809459,0.341741761595705,0.206386867963223,1.11116716421827,0,0.410082683163076,0.686334519619568,0.849892149969277,0.559805809294632,0.829199842826543,0,0,0.609958401380546,0.972048067396211,0.418176592028937,0.218362563746178,0.809186078308924,0.247960367176008,0.785267825952089,0.388844919875379,0,0.56369293868419,0.448549638131936,0.496375471371293,0.583353565032143,0.645799117388655,0,0.938857909166032,1.5624526181274,3.04092098834561,1.20792060413003,0.864090018773596,0.948033361884535,0.405450430580328,0.821687657318618,1.68897069871134,1.79026695667481,1.19208812868759,0.961563596159751,0.738447635872886,1.11063094942962,0.914481679859998,1.20991422164209,0.487289403698762,0.769694733122636,0.233753804363138,0.680191150845634,0.221985953374065,0.0897138566094757,0.167884616364078,0.965947970160952,0.563047426353546,0.36630324853453,0.428736758158132,0,9.60078132449013,8.74617949363636,5.72895513439397,7.38968684077857,4.7955776383945,4.5323633843382,6.07520250208625,9.90706647093285,12.2348450425735,7.24864436452548,1.03787347584177,0.798049746802062,0.853668028770671,1.45864030240976,0.838452650511929,0.735374033800057,0.222246727801615,1.44224540067226,0.962757628775446,1.01078884705519,1.01391719956096,0.565879024158229,0.749132059759059,0.768301828858431,1.09127391015665,0.476293691283074,1.15884325944855,0.578727661391115,1.23625770240992,1.03039244094078,0.342869252385415,0.532427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| |phase1_expression=0.640595388419176,0,0,0,0,0,0,0.645616617207881,14.6420271037733,3.27690336850791,8.21846247482424,1.7549874978974,1.19840510951844,0.0874204024189974,0,0,0,0.315462165358238,0.137114433605739,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,0.811015449756117,1.28482726513177,3.12956537739216,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0,2.17608642603403,4.36921938885203,0.514518872071894,0.286533439938757,0,2.02316460859598,3.1739458756322,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.518448061542388,1.08004750665353,0.210324961351382,2.85650984403804,2.87129103237098,1.10241719293459,2.01275489138296,2.75765635983006,4.40463523997555,3.19218345212969,2.91852413186863,5.01167893374737,2.47016637726506,3.64639359389732,0,5.6276261003168,2.75036845998258,4.41942878210502,2.42031857358475,2.79599168737951,0.757261933331841,0.302286240427142,2.31891590961342,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,0.35333957451034,0.281686839553361,1.28326477414318,2.54805239706646,0,0,0,0.505524445014783,0.68510327831436,3.10725460376606,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0,0.23517741427141,0.376999773989026,0.247194967734374,1.3013942122792,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,2.39665023047716,1.37250180845588,4.64921102817598,5.73620256634512,9.2057564638919,3.1168206683934,4.05603157669394,0.81471491080253,0.373220911830279,1.0108910337347,0.210441855886474,0.390361328888111,0.229902104433473,0,1.05493372485001,0.544291993210623,0.768682321709099,0.468508622798644,1.29351685369508,0.431135985865684,1.32374256117473,1.58356011747554,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0,0,0,0,0.621377317606506,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.810688095458557,0.584799949701329,1.09775057645525,0.671032093801859,2.94405927989778,2.46971069710283,0.660837565967596,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,0.605050573870028,0.22237804384487,0,0.474529061544512,0.164698954724011,0.754005626400808,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.49095073923223,0.316182685621286,0.295220295959204,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0,0.335012514883631,0,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0,0,1.44495530989013,0.937693492737625,8.52461715958712,0,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0.891194696329576,0.566153061577665,0,1.16902343164525,1.18586333383957,5.14114106274891,0.425820255624806,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.948110273807448,0,2.06271086496374,2.7235168460303,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0.356737635204141,0.987294123612726,0.608929898229199,0.23467170806371,0,4.19003956304428,0.65954501176592,0.484393280087717,0.542816324353403,0.477489376012546,0.820704498725306,0.582961673259701,1.66882771809459,0.341741761595705,0.206386867963223,1.11116716421827,0,0.410082683163076,0.686334519619568,0.849892149969277,0.559805809294632,0.829199842826543,0,0,0.609958401380546,0.972048067396211,0.418176592028937,0.218362563746178,0.809186078308924,0.247960367176008,0.785267825952089,0.388844919875379,0,0.56369293868419,0.448549638131936,0.496375471371293,0.583353565032143,0.645799117388655,0,0.938857909166032,1.5624526181274,3.04092098834561,1.20792060413003,0.864090018773596,0.948033361884535,0.405450430580328,0.821687657318618,1.68897069871134,1.79026695667481,1.19208812868759,0.961563596159751,0.738447635872886,1.11063094942962,0.914481679859998,1.20991422164209,0.487289403698762,0.769694733122636,0.233753804363138,0.680191150845634,0.221985953374065,0.0897138566094757,0.167884616364078,0.965947970160952,0.563047426353546,0.36630324853453,0.428736758158132,0,9.60078132449013,8.74617949363636,5.72895513439397,7.38968684077857,4.7955776383945,4.5323633843382,6.07520250208625,9.90706647093285,12.2348450425735,7.24864436452548,1.03787347584177,0.798049746802062,0.853668028770671,1.45864030240976,0.838452650511929,0.735374033800057,0.222246727801615,1.44224540067226,0.962757628775446,1.01078884705519,1.01391719956096,0.565879024158229,0.749132059759059,0.768301828858431,1.09127391015665,0.476293691283074,1.15884325944855,0.578727661391115,1.23625770240992,1.03039244094078,0.342869252385415,0.532427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| ||
|short_description=p@chr7:89078700..89078758,- | |short_description=p@chr7:89078700..89078758,- | ||
}} | }} |
Latest revision as of 16:31, 5 August 2015
Short description: | p@chr7:89078700..89078758, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:89078700..89078758, - |
Coexpression cluster: | MCL_coexpression_mm9:1290 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.05e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.05e-14 | 23 |
neuron | 1.16e-09 | 33 |
neuronal stem cell | 1.16e-09 | 33 |
neuroblast | 1.16e-09 | 33 |
electrically signaling cell | 1.16e-09 | 33 |
electrically responsive cell | 6.27e-09 | 39 |
electrically active cell | 6.27e-09 | 39 |
neural cell | 8.08e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.31e-22 | 54 |
gray matter | 3.09e-22 | 34 |
neural tube | 1.30e-20 | 52 |
neural rod | 1.30e-20 | 52 |
future spinal cord | 1.30e-20 | 52 |
neural keel | 1.30e-20 | 52 |
central nervous system | 1.41e-20 | 73 |
nervous system | 1.30e-19 | 75 |
brain grey matter | 6.95e-18 | 29 |
regional part of telencephalon | 6.95e-18 | 29 |
telencephalon | 6.95e-18 | 29 |
brain | 7.64e-17 | 47 |
future brain | 7.64e-17 | 47 |
neurectoderm | 3.39e-16 | 64 |
neural plate | 3.39e-16 | 64 |
presumptive neural plate | 3.39e-16 | 64 |
regional part of brain | 6.20e-16 | 46 |
anterior neural tube | 7.87e-16 | 40 |
regional part of forebrain | 4.10e-15 | 39 |
forebrain | 4.10e-15 | 39 |
future forebrain | 4.10e-15 | 39 |
ectoderm-derived structure | 8.70e-14 | 95 |
ectoderm | 8.70e-14 | 95 |
presumptive ectoderm | 8.70e-14 | 95 |
regional part of cerebral cortex | 2.71e-13 | 17 |
pre-chordal neural plate | 5.89e-13 | 49 |
cerebral cortex | 9.91e-13 | 21 |
cerebral hemisphere | 9.91e-13 | 21 |
pallium | 9.91e-13 | 21 |
ecto-epithelium | 1.25e-12 | 73 |
occipital lobe | 1.70e-12 | 10 |
visual cortex | 1.70e-12 | 10 |
neocortex | 1.70e-12 | 10 |
structure with developmental contribution from neural crest | 3.95e-08 | 92 |