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FFCP PHASE1:Mm9::chr7:89078700..89078758,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1290
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr7:89078700..89078758,-
|description=CAGE_peak_at_chr7:89078700..89078758,-
|description=CAGE_peak_at_chr7:89078700..89078758,-
|id=chr7:89078700..89078758,-
|id=chr7:89078700..89078758,-
|ontology_enrichment_celltype=CL:0000117!1.33e-08!23;CL:0000337!1.33e-08!23;CL:0000540!1.88e-07!33;CL:0000047!1.88e-07!33;CL:0000031!1.88e-07!33;CL:0000404!1.88e-07!33;CL:0000393!3.90e-07!39;CL:0000211!3.90e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-14,23;CL:0000337,5.05e-14,23;CL:0000540,1.16e-09,33;CL:0000047,1.16e-09,33;CL:0000031,1.16e-09,33;CL:0000404,1.16e-09,33;CL:0000393,6.27e-09,39;CL:0000211,6.27e-09,39;CL:0002319,8.08e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.22e-15!94;UBERON:0007811!6.75e-15!86;UBERON:0001017!1.01e-14!73;UBERON:0005743!1.01e-14!73;UBERON:0000073!1.69e-14!75;UBERON:0001016!1.69e-14!75;UBERON:0001049!4.80e-14!52;UBERON:0005068!4.80e-14!52;UBERON:0006241!4.80e-14!52;UBERON:0007135!4.80e-14!52;UBERON:0000955!2.61e-13!50;UBERON:0006238!2.61e-13!50;UBERON:0002020!8.31e-13!34;UBERON:0002616!9.92e-13!49;UBERON:0000033!7.85e-11!63;UBERON:0003080!2.18e-10!40;UBERON:0002346!2.78e-10!71;UBERON:0003075!2.78e-10!71;UBERON:0007284!2.78e-10!71;UBERON:0002791!2.79e-10!29;UBERON:0003528!2.79e-10!29;UBERON:0001893!2.79e-10!29;UBERON:0002780!5.87e-10!39;UBERON:0001890!5.87e-10!39;UBERON:0006240!5.87e-10!39;UBERON:0004121!8.14e-10!102;UBERON:0000924!8.14e-10!102;UBERON:0006601!8.14e-10!102;UBERON:0003056!6.32e-09!49;UBERON:0002021!4.92e-08!10;UBERON:0000411!4.92e-08!10;UBERON:0001950!4.92e-08!10;UBERON:0002619!7.61e-08!17;UBERON:0000956!1.03e-07!21;UBERON:0001869!1.03e-07!21;UBERON:0000203!1.03e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.31e-22,54;UBERON:0002020,3.09e-22,34;UBERON:0001049,1.30e-20,52;UBERON:0005068,1.30e-20,52;UBERON:0006241,1.30e-20,52;UBERON:0007135,1.30e-20,52;UBERON:0001017,1.41e-20,73;UBERON:0001016,1.30e-19,75;UBERON:0003528,6.95e-18,29;UBERON:0002791,6.95e-18,29;UBERON:0001893,6.95e-18,29;UBERON:0000955,7.64e-17,47;UBERON:0006238,7.64e-17,47;UBERON:0002346,3.39e-16,64;UBERON:0003075,3.39e-16,64;UBERON:0007284,3.39e-16,64;UBERON:0002616,6.20e-16,46;UBERON:0003080,7.87e-16,40;UBERON:0002780,4.10e-15,39;UBERON:0001890,4.10e-15,39;UBERON:0006240,4.10e-15,39;UBERON:0004121,8.70e-14,95;UBERON:0000924,8.70e-14,95;UBERON:0006601,8.70e-14,95;UBERON:0002619,2.71e-13,17;UBERON:0003056,5.89e-13,49;UBERON:0000956,9.91e-13,21;UBERON:0001869,9.91e-13,21;UBERON:0000203,9.91e-13,21;UBERON:0010371,1.25e-12,73;UBERON:0002021,1.70e-12,10;UBERON:0000411,1.70e-12,10;UBERON:0001950,1.70e-12,10;UBERON:0010314,3.95e-08,92
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.645616617207881,14.6420271037733,3.27690336850791,8.21846247482424,1.7549874978974,1.19840510951844,0.0874204024189974,0,0,0,0.315462165358238,0.137114433605739,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,0.811015449756117,1.28482726513177,3.12956537739216,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0,2.17608642603403,4.36921938885203,0.514518872071894,0.286533439938757,0,2.02316460859598,3.1739458756322,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.518448061542388,1.08004750665353,0.210324961351382,2.85650984403804,2.87129103237098,1.10241719293459,2.01275489138296,2.75765635983006,4.40463523997555,3.19218345212969,2.91852413186863,5.01167893374737,2.47016637726506,3.64639359389732,0,5.6276261003168,2.75036845998258,4.41942878210502,2.42031857358475,2.79599168737951,0.757261933331841,0.302286240427142,2.31891590961342,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,0.35333957451034,0.281686839553361,1.28326477414318,2.54805239706646,0,0,0,0.505524445014783,0.68510327831436,3.10725460376606,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0,0.23517741427141,0.376999773989026,0.247194967734374,1.3013942122792,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,2.39665023047716,1.37250180845588,4.64921102817598,5.73620256634512,9.2057564638919,3.1168206683934,4.05603157669394,0.81471491080253,0.373220911830279,1.0108910337347,0.210441855886474,0.390361328888111,0.229902104433473,0,1.05493372485001,0.544291993210623,0.768682321709099,0.468508622798644,1.29351685369508,0.431135985865684,1.32374256117473,1.58356011747554,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0,0,0,0,0.621377317606506,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.810688095458557,0.584799949701329,1.09775057645525,0.671032093801859,2.94405927989778,2.46971069710283,0.660837565967596,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,0.605050573870028,0.22237804384487,0,0.474529061544512,0.164698954724011,0.754005626400808,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.49095073923223,0.316182685621286,0.295220295959204,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0,0.335012514883631,0,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0,0,1.44495530989013,0.937693492737625,8.52461715958712,0,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0.891194696329576,0.566153061577665,0,1.16902343164525,1.18586333383957,5.14114106274891,0.425820255624806,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.948110273807448,0,2.06271086496374,2.7235168460303,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0.356737635204141,0.987294123612726,0.608929898229199,0.23467170806371,0,4.19003956304428,0.65954501176592,0.484393280087717,0.542816324353403,0.477489376012546,0.820704498725306,0.582961673259701,1.66882771809459,0.341741761595705,0.206386867963223,1.11116716421827,0,0.410082683163076,0.686334519619568,0.849892149969277,0.559805809294632,0.829199842826543,0,0,0.609958401380546,0.972048067396211,0.418176592028937,0.218362563746178,0.809186078308924,0.247960367176008,0.785267825952089,0.388844919875379,0,0.56369293868419,0.448549638131936,0.496375471371293,0.583353565032143,0.645799117388655,0,0.938857909166032,1.5624526181274,3.04092098834561,1.20792060413003,0.864090018773596,0.948033361884535,0.405450430580328,0.821687657318618,1.68897069871134,1.79026695667481,1.19208812868759,0.961563596159751,0.738447635872886,1.11063094942962,0.914481679859998,1.20991422164209,0.487289403698762,0.769694733122636,0.233753804363138,0.680191150845634,0.221985953374065,0.0897138566094757,0.167884616364078,0.965947970160952,0.563047426353546,0.36630324853453,0.428736758158132,0,9.60078132449013,8.74617949363636,5.72895513439397,7.38968684077857,4.7955776383945,4.5323633843382,6.07520250208625,9.90706647093285,12.2348450425735,7.24864436452548,1.03787347584177,0.798049746802062,0.853668028770671,1.45864030240976,0.838452650511929,0.735374033800057,0.222246727801615,1.44224540067226,0.962757628775446,1.01078884705519,1.01391719956096,0.565879024158229,0.749132059759059,0.768301828858431,1.09127391015665,0.476293691283074,1.15884325944855,0.578727661391115,1.23625770240992,1.03039244094078,0.342869252385415,0.532427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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.645616617207881,14.6420271037733,3.27690336850791,8.21846247482424,1.7549874978974,1.19840510951844,0.0874204024189974,0,0,0,0.315462165358238,0.137114433605739,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,0.811015449756117,1.28482726513177,3.12956537739216,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0,2.17608642603403,4.36921938885203,0.514518872071894,0.286533439938757,0,2.02316460859598,3.1739458756322,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.518448061542388,1.08004750665353,0.210324961351382,2.85650984403804,2.87129103237098,1.10241719293459,2.01275489138296,2.75765635983006,4.40463523997555,3.19218345212969,2.91852413186863,5.01167893374737,2.47016637726506,3.64639359389732,0,5.6276261003168,2.75036845998258,4.41942878210502,2.42031857358475,2.79599168737951,0.757261933331841,0.302286240427142,2.31891590961342,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,0.35333957451034,0.281686839553361,1.28326477414318,2.54805239706646,0,0,0,0.505524445014783,0.68510327831436,3.10725460376606,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0,0.23517741427141,0.376999773989026,0.247194967734374,1.3013942122792,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,2.39665023047716,1.37250180845588,4.64921102817598,5.73620256634512,9.2057564638919,3.1168206683934,4.05603157669394,0.81471491080253,0.373220911830279,1.0108910337347,0.210441855886474,0.390361328888111,0.229902104433473,0,1.05493372485001,0.544291993210623,0.768682321709099,0.468508622798644,1.29351685369508,0.431135985865684,1.32374256117473,1.58356011747554,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0,0,0,0,0.621377317606506,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.810688095458557,0.584799949701329,1.09775057645525,0.671032093801859,2.94405927989778,2.46971069710283,0.660837565967596,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,0.605050573870028,0.22237804384487,0,0.474529061544512,0.164698954724011,0.754005626400808,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.49095073923223,0.316182685621286,0.295220295959204,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0,0.335012514883631,0,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0,0,1.44495530989013,0.937693492737625,8.52461715958712,0,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0.891194696329576,0.566153061577665,0,1.16902343164525,1.18586333383957,5.14114106274891,0.425820255624806,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.948110273807448,0,2.06271086496374,2.7235168460303,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0.356737635204141,0.987294123612726,0.608929898229199,0.23467170806371,0,4.19003956304428,0.65954501176592,0.484393280087717,0.542816324353403,0.477489376012546,0.820704498725306,0.582961673259701,1.66882771809459,0.341741761595705,0.206386867963223,1.11116716421827,0,0.410082683163076,0.686334519619568,0.849892149969277,0.559805809294632,0.829199842826543,0,0,0.609958401380546,0.972048067396211,0.418176592028937,0.218362563746178,0.809186078308924,0.247960367176008,0.785267825952089,0.388844919875379,0,0.56369293868419,0.448549638131936,0.496375471371293,0.583353565032143,0.645799117388655,0,0.938857909166032,1.5624526181274,3.04092098834561,1.20792060413003,0.864090018773596,0.948033361884535,0.405450430580328,0.821687657318618,1.68897069871134,1.79026695667481,1.19208812868759,0.961563596159751,0.738447635872886,1.11063094942962,0.914481679859998,1.20991422164209,0.487289403698762,0.769694733122636,0.233753804363138,0.680191150845634,0.221985953374065,0.0897138566094757,0.167884616364078,0.965947970160952,0.563047426353546,0.36630324853453,0.428736758158132,0,9.60078132449013,8.74617949363636,5.72895513439397,7.38968684077857,4.7955776383945,4.5323633843382,6.07520250208625,9.90706647093285,12.2348450425735,7.24864436452548,1.03787347584177,0.798049746802062,0.853668028770671,1.45864030240976,0.838452650511929,0.735374033800057,0.222246727801615,1.44224540067226,0.962757628775446,1.01078884705519,1.01391719956096,0.565879024158229,0.749132059759059,0.768301828858431,1.09127391015665,0.476293691283074,1.15884325944855,0.578727661391115,1.23625770240992,1.03039244094078,0.342869252385415,0.532427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|short_description=p@chr7:89078700..89078758,-
|short_description=p@chr7:89078700..89078758,-
}}
}}

Latest revision as of 16:31, 5 August 2015

Short description:p@chr7:89078700..89078758, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr7:89078700..89078758, -
Coexpression cluster:MCL_coexpression_mm9:1290
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr7:89078700..89078758-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.22
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.05e-1423
neuroblast (sensu Vertebrata)5.05e-1423
neuron1.16e-0933
neuronal stem cell1.16e-0933
neuroblast1.16e-0933
electrically signaling cell1.16e-0933
electrically responsive cell6.27e-0939
electrically active cell6.27e-0939
neural cell8.08e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.31e-2254
gray matter3.09e-2234
neural tube1.30e-2052
neural rod1.30e-2052
future spinal cord1.30e-2052
neural keel1.30e-2052
central nervous system1.41e-2073
nervous system1.30e-1975
brain grey matter6.95e-1829
regional part of telencephalon6.95e-1829
telencephalon6.95e-1829
brain7.64e-1747
future brain7.64e-1747
neurectoderm3.39e-1664
neural plate3.39e-1664
presumptive neural plate3.39e-1664
regional part of brain6.20e-1646
anterior neural tube7.87e-1640
regional part of forebrain4.10e-1539
forebrain4.10e-1539
future forebrain4.10e-1539
ectoderm-derived structure8.70e-1495
ectoderm8.70e-1495
presumptive ectoderm8.70e-1495
regional part of cerebral cortex2.71e-1317
pre-chordal neural plate5.89e-1349
cerebral cortex9.91e-1321
cerebral hemisphere9.91e-1321
pallium9.91e-1321
ecto-epithelium1.25e-1273
occipital lobe1.70e-1210
visual cortex1.70e-1210
neocortex1.70e-1210
structure with developmental contribution from neural crest3.95e-0892
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