FFCP PHASE1:Mm9::chr4:82138721..82138755,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=76|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:82138721..82138755,-|id=chr4:82138721..82138755,-|ontology_enrichment_celltype=CL:0002609!9.01e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,4.62e-27,6;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.23e-14,21;UBERON:0001869,5.23e-14,21;UBERON:0000203,5.23e-14,21;UBERON:0003528,2.47e-10,29;UBERON:0002791,2.47e-10,29;UBERON:0001893,2.47e-10,29;UBERON:0002020,6.61e-09,34;UBERON:0002780,7.68e-08,39;UBERON:0001890,7.68e-08,39;UBERON:0006240,7.68e-08,39;UBERON:0003080,1.17e-07,40;UBERON:0002616,9.87e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,3.83651565541367,3.51015439662396,3.57552434297349,0,0,0,0.287536413054709,0,0,0,0,0.263772575460388,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.243206428637567,0,0,0,0,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0|short_description=p@chr4:82138721..82138755,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:82138721..82138755,- | |||
|description=CAGE_peak_at_chr4:82138721..82138755,- | |||
|id=chr4:82138721..82138755,- | |||
|ontology_enrichment_celltype=CL:0002609!9.01e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.62e-27,6;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.23e-14,21;UBERON:0001869,5.23e-14,21;UBERON:0000203,5.23e-14,21;UBERON:0003528,2.47e-10,29;UBERON:0002791,2.47e-10,29;UBERON:0001893,2.47e-10,29;UBERON:0002020,6.61e-09,34;UBERON:0002780,7.68e-08,39;UBERON:0001890,7.68e-08,39;UBERON:0006240,7.68e-08,39;UBERON:0003080,1.17e-07,40;UBERON:0002616,9.87e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,3.83651565541367,3.51015439662396,3.57552434297349,0,0,0,0.287536413054709,0,0,0,0,0.263772575460388,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.243206428637567,0,0,0,0,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr4:82138721..82138755,- | |||
}} |
Latest revision as of 18:19, 5 August 2015
Short description: | p@chr4:82138721..82138755, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:82138721..82138755, - |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.62e-27 | 6 |
CNS neuron (sensu Vertebrata) | 1.12e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 5.23e-14 | 21 |
cerebral hemisphere | 5.23e-14 | 21 |
pallium | 5.23e-14 | 21 |
brain grey matter | 2.47e-10 | 29 |
regional part of telencephalon | 2.47e-10 | 29 |
telencephalon | 2.47e-10 | 29 |
gray matter | 6.61e-09 | 34 |
regional part of forebrain | 7.68e-08 | 39 |
forebrain | 7.68e-08 | 39 |
future forebrain | 7.68e-08 | 39 |
anterior neural tube | 1.17e-07 | 40 |
regional part of brain | 9.87e-07 | 46 |