FFCP PHASE1:Mm9::chr15:83602482..83602487,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:83602482..83602487,+ | |||
|description=CAGE_peak_at_chr15:83602482..83602487,+ | |description=CAGE_peak_at_chr15:83602482..83602487,+ | ||
|id=chr15:83602482..83602487,+ | |id=chr15:83602482..83602487,+ | ||
|ontology_enrichment_celltype=CL:0002609!4.78e-18!6;CL:0002608!1.03e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.48e-72,6;CL:0002608,8.72e-24,3;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!7.84e-08!21;UBERON:0001869!7.84e-08!21;UBERON:0000203!7.84e-08!21;UBERON:0001954!7.07e-07!7;UBERON:0003022!7.07e-07!7;UBERON:0002421!7.07e-07!7;UBERON:0000349!7.07e-07!7;UBERON:0002600!7.07e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0003528,1.24e-15,29;UBERON:0002791,1.24e-15,29;UBERON:0001893,1.24e-15,29;UBERON:0002020,1.96e-13,34;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0001954,7.87e-11,7;UBERON:0003022,7.87e-11,7;UBERON:0002421,7.87e-11,7;UBERON:0000349,7.87e-11,7;UBERON:0002600,7.87e-11,7;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7328260431052,4.18518408828241,4.20649922702764,0,0,1.83736198822431,1.15014565221884,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.628839487883947,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.229741875822453,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.25384382367503,0,0.526139422875686,0,0.561142271657738,0,0.197008964751127,0,0,0.385813221962283,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7328260431052,4.18518408828241,4.20649922702764,0,0,1.83736198822431,1.15014565221884,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.628839487883947,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.229741875822453,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.25384382367503,0,0.526139422875686,0,0.561142271657738,0,0.197008964751127,0,0,0.385813221962283,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr15:83602482..83602487,+ | |short_description=p@chr15:83602482..83602487,+ | ||
}} | }} |
Latest revision as of 18:23, 5 August 2015
Short description: | p@chr15:83602482..83602487, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:83602482..83602487, + |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.48e-72 | 6 |
hippocampal neuron | 8.72e-24 | 3 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.63e-21 | 21 |
cerebral hemisphere | 2.63e-21 | 21 |
pallium | 2.63e-21 | 21 |
brain grey matter | 1.24e-15 | 29 |
regional part of telencephalon | 1.24e-15 | 29 |
telencephalon | 1.24e-15 | 29 |
gray matter | 1.96e-13 | 34 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
Ammon's horn | 7.87e-11 | 7 |
lobe parts of cerebral cortex | 7.87e-11 | 7 |
hippocampal formation | 7.87e-11 | 7 |
limbic system | 7.87e-11 | 7 |
limbic lobe | 7.87e-11 | 7 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |