FFCP PHASE1:Mm9::chr11:31732115..31732136,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=36|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:31732115..31732136,+|id=chr11:31732115..31732136,+|ontology_enrichment_celltype=CL:0000791!1.08e-08!9;CL:0000789!1.08e-08!9;CL:0002420!1.08e-08!9;CL:0002419!1.08e-08!9;CL:0000790!1.08e-08!9;CL:0000624!1.97e-07!8;CL:0000893!6.30e-07!6;CL:0002489!6.30e-07!6;CL:0000898!6.30e-07!6;CL:0000809!6.30e-07!6;CL:0000810!6.30e-07!6;CL:0000895!6.30e-07!6;CL:0000808!6.30e-07!6;CL:0000894!6.30e-07!6;CL:0000806!6.30e-07!6;CL:0000807!6.30e-07!6;CL:0000805!6.30e-07!6;CL:0002425!6.30e-07!6;CL:0002436!6.30e-07!6;CL:0002427!6.30e-07!6;CL:0002428!6.30e-07!6;CL:0002429!6.30e-07!6;CL:0002433!6.30e-07!6;CL:0002431!6.30e-07!6;CL:0002432!6.30e-07!6;CL:0000084!6.89e-07!11;CL:0000827!6.89e-07!11|ontology_enrichment_celltype_v019_2=CL:0000815,1.56e-08,1;CL:0000792,1.56e-08,1;CL:0000624,1.79e-08,8;CL:0000791,1.38e-07,9;CL:0000789,1.38e-07,9;CL:0002420,1.38e-07,9;CL:0002419,1.38e-07,9;CL:0000790,1.38e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.67e-10,3;DOID:4045,3.67e-10,3|ontology_enrichment_uberon=UBERON:0004177!1.24e-26!29;UBERON:0006562!2.17e-22!24;UBERON:0001557!2.17e-22!24;UBERON:0001042!2.17e-22!24;UBERON:0008814!2.17e-22!24;UBERON:0009145!2.17e-22!24;UBERON:0002370!3.47e-21!23;UBERON:0000974!3.47e-21!23;UBERON:0004807!3.47e-21!23;UBERON:0005058!3.47e-21!23;UBERON:0003351!3.47e-21!23;UBERON:0009113!3.47e-21!23;UBERON:0003295!3.47e-21!23;UBERON:0009722!3.47e-21!23;UBERON:0005562!3.47e-21!23;UBERON:0007690!3.47e-21!23;UBERON:0003408!4.35e-20!24;UBERON:0002193!5.59e-20!48;UBERON:0002390!6.89e-20!45;UBERON:0003061!6.89e-20!45;UBERON:0000065!1.86e-19!41;UBERON:0000072!2.70e-19!27;UBERON:0001004!7.90e-19!42;UBERON:0000063!1.15e-13!35;UBERON:0005057!1.17e-13!51;UBERON:0002405!1.83e-12!70;UBERON:0001041!1.99e-10!92;UBERON:0000077!2.17e-10!97;UBERON:0005911!6.43e-09!69;UBERON:0003081!2.07e-08!88;UBERON:0003104!8.60e-08!131;UBERON:0009142!8.60e-08!131;UBERON:0000490!1.27e-07!66;UBERON:0003929!6.26e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.06e-13,23;UBERON:0000974,1.06e-13,23;UBERON:0004807,1.06e-13,23;UBERON:0005058,1.06e-13,23;UBERON:0003351,1.06e-13,23;UBERON:0009113,1.06e-13,23;UBERON:0003295,1.06e-13,23;UBERON:0009722,1.06e-13,23;UBERON:0005562,1.06e-13,23;UBERON:0007690,1.06e-13,23;UBERON:0006562,4.13e-13,24;UBERON:0003408,4.13e-13,24;UBERON:0001557,4.13e-13,24;UBERON:0001042,4.13e-13,24;UBERON:0008814,4.13e-13,24;UBERON:0009145,4.13e-13,24;UBERON:0000072,1.33e-11,27;UBERON:0004177,9.05e-11,29;UBERON:0005057,9.05e-11,29;UBERON:0000077,7.75e-09,35;UBERON:0007811,1.41e-08,36;UBERON:0000065,1.82e-07,41;UBERON:0000490,2.24e-07,66;UBERON:0001004,2.83e-07,42;UBERON:0000153,4.30e-07,43;UBERON:0002390,9.41e-07,45;UBERON:0003061,9.41e-07,45|phase1_expression=0,0,0,0,0,0,0,8.00564605337773,0,0.468129052643987,0.171217968225505,0.0797721589953364,2.73921167889929,6.03200776691082,0,0,0,0.315462165358238,0.411343300817216,0.84877930359606,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,0.7813353445238,3.14114246384279,3.52938892818609,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.206386867963223,0.740778109478847,0,0.410082683163076,0.457556346413045,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.513554785824136,0.25984164595559,0.537080087002444,0.993406773906324,0.600977247599844,0.886137163047463,1.31256384932592,2.13379058634,0.604957110821043,1.16949456887703,1.6356013078856,2.80504565235765,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p@chr11:31732115..31732136,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:31732115..31732136,+ | |||
|description=CAGE_peak_at_chr11:31732115..31732136,+ | |||
|id=chr11:31732115..31732136,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.08e-08!9;CL:0000789!1.08e-08!9;CL:0002420!1.08e-08!9;CL:0002419!1.08e-08!9;CL:0000790!1.08e-08!9;CL:0000624!1.97e-07!8;CL:0000893!6.30e-07!6;CL:0002489!6.30e-07!6;CL:0000898!6.30e-07!6;CL:0000809!6.30e-07!6;CL:0000810!6.30e-07!6;CL:0000895!6.30e-07!6;CL:0000808!6.30e-07!6;CL:0000894!6.30e-07!6;CL:0000806!6.30e-07!6;CL:0000807!6.30e-07!6;CL:0000805!6.30e-07!6;CL:0002425!6.30e-07!6;CL:0002436!6.30e-07!6;CL:0002427!6.30e-07!6;CL:0002428!6.30e-07!6;CL:0002429!6.30e-07!6;CL:0002433!6.30e-07!6;CL:0002431!6.30e-07!6;CL:0002432!6.30e-07!6;CL:0000084!6.89e-07!11;CL:0000827!6.89e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.56e-08,1;CL:0000792,1.56e-08,1;CL:0000624,1.79e-08,8;CL:0000791,1.38e-07,9;CL:0000789,1.38e-07,9;CL:0002420,1.38e-07,9;CL:0002419,1.38e-07,9;CL:0000790,1.38e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.67e-10,3;DOID:4045,3.67e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.24e-26!29;UBERON:0006562!2.17e-22!24;UBERON:0001557!2.17e-22!24;UBERON:0001042!2.17e-22!24;UBERON:0008814!2.17e-22!24;UBERON:0009145!2.17e-22!24;UBERON:0002370!3.47e-21!23;UBERON:0000974!3.47e-21!23;UBERON:0004807!3.47e-21!23;UBERON:0005058!3.47e-21!23;UBERON:0003351!3.47e-21!23;UBERON:0009113!3.47e-21!23;UBERON:0003295!3.47e-21!23;UBERON:0009722!3.47e-21!23;UBERON:0005562!3.47e-21!23;UBERON:0007690!3.47e-21!23;UBERON:0003408!4.35e-20!24;UBERON:0002193!5.59e-20!48;UBERON:0002390!6.89e-20!45;UBERON:0003061!6.89e-20!45;UBERON:0000065!1.86e-19!41;UBERON:0000072!2.70e-19!27;UBERON:0001004!7.90e-19!42;UBERON:0000063!1.15e-13!35;UBERON:0005057!1.17e-13!51;UBERON:0002405!1.83e-12!70;UBERON:0001041!1.99e-10!92;UBERON:0000077!2.17e-10!97;UBERON:0005911!6.43e-09!69;UBERON:0003081!2.07e-08!88;UBERON:0003104!8.60e-08!131;UBERON:0009142!8.60e-08!131;UBERON:0000490!1.27e-07!66;UBERON:0003929!6.26e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.06e-13,23;UBERON:0000974,1.06e-13,23;UBERON:0004807,1.06e-13,23;UBERON:0005058,1.06e-13,23;UBERON:0003351,1.06e-13,23;UBERON:0009113,1.06e-13,23;UBERON:0003295,1.06e-13,23;UBERON:0009722,1.06e-13,23;UBERON:0005562,1.06e-13,23;UBERON:0007690,1.06e-13,23;UBERON:0006562,4.13e-13,24;UBERON:0003408,4.13e-13,24;UBERON:0001557,4.13e-13,24;UBERON:0001042,4.13e-13,24;UBERON:0008814,4.13e-13,24;UBERON:0009145,4.13e-13,24;UBERON:0000072,1.33e-11,27;UBERON:0004177,9.05e-11,29;UBERON:0005057,9.05e-11,29;UBERON:0000077,7.75e-09,35;UBERON:0007811,1.41e-08,36;UBERON:0000065,1.82e-07,41;UBERON:0000490,2.24e-07,66;UBERON:0001004,2.83e-07,42;UBERON:0000153,4.30e-07,43;UBERON:0002390,9.41e-07,45;UBERON:0003061,9.41e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,8.00564605337773,0,0.468129052643987,0.171217968225505,0.0797721589953364,2.73921167889929,6.03200776691082,0,0,0,0.315462165358238,0.411343300817216,0.84877930359606,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,0.7813353445238,3.14114246384279,3.52938892818609,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.206386867963223,0.740778109478847,0,0.410082683163076,0.457556346413045,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.513554785824136,0.25984164595559,0.537080087002444,0.993406773906324,0.600977247599844,0.886137163047463,1.31256384932592,2.13379058634,0.604957110821043,1.16949456887703,1.6356013078856,2.80504565235765,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr11:31732115..31732136,+ | |||
}} |
Latest revision as of 19:20, 5 August 2015
Short description: | p@chr11:31732115..31732136, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:31732115..31732136, + |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.56e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.56e-08 | 1 |
CD4-positive, alpha-beta T cell | 1.79e-08 | 8 |
mature alpha-beta T cell | 1.38e-07 | 9 |
alpha-beta T cell | 1.38e-07 | 9 |
immature T cell | 1.38e-07 | 9 |
mature T cell | 1.38e-07 | 9 |
immature alpha-beta T cell | 1.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.06e-13 | 23 |
neck | 1.06e-13 | 23 |
respiratory system epithelium | 1.06e-13 | 23 |
hemolymphoid system gland | 1.06e-13 | 23 |
pharyngeal epithelium | 1.06e-13 | 23 |
thymic region | 1.06e-13 | 23 |
pharyngeal gland | 1.06e-13 | 23 |
entire pharyngeal arch endoderm | 1.06e-13 | 23 |
thymus primordium | 1.06e-13 | 23 |
early pharyngeal endoderm | 1.06e-13 | 23 |
pharynx | 4.13e-13 | 24 |
gland of gut | 4.13e-13 | 24 |
upper respiratory tract | 4.13e-13 | 24 |
chordate pharynx | 4.13e-13 | 24 |
pharyngeal arch system | 4.13e-13 | 24 |
pharyngeal region of foregut | 4.13e-13 | 24 |
segment of respiratory tract | 1.33e-11 | 27 |
hemopoietic organ | 9.05e-11 | 29 |
immune organ | 9.05e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 7.75e-09 | 35 |
craniocervical region | 1.41e-08 | 36 |
respiratory tract | 1.82e-07 | 41 |
unilaminar epithelium | 2.24e-07 | 66 |
respiratory system | 2.83e-07 | 42 |
anterior region of body | 4.30e-07 | 43 |
hematopoietic system | 9.41e-07 | 45 |
blood island | 9.41e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.67e-10 | 3 |
muscle cancer | 3.67e-10 | 3 |