FFCP PHASE1:Mm9::chr6:48504716..48504730,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:48504716..48504730,- to FFCP PHASE1:Mm9::chr6:48504716..48504730,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=366 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:48504716..48504730,- | |||
|description=CAGE_peak_at_chr6:48504716..48504730,- | |||
|id=chr6:48504716..48504730,- | |||
|ontology_enrichment_celltype=CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.30e-07,33;CL:0000047,2.30e-07,33;CL:0000031,2.30e-07,33;CL:0000404,2.30e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.74e-14!63;UBERON:0000153!5.09e-13!94;UBERON:0001017!1.57e-12!73;UBERON:0005743!1.57e-12!73;UBERON:0007811!2.00e-12!86;UBERON:0000955!9.85e-12!50;UBERON:0006238!9.85e-12!50;UBERON:0003056!1.96e-11!49;UBERON:0000073!2.14e-11!75;UBERON:0001016!2.14e-11!75;UBERON:0002616!3.26e-11!49;UBERON:0004121!7.73e-11!102;UBERON:0000924!7.73e-11!102;UBERON:0006601!7.73e-11!102;UBERON:0002346!7.74e-11!71;UBERON:0003075!7.74e-11!71;UBERON:0007284!7.74e-11!71;UBERON:0001049!4.66e-10!52;UBERON:0005068!4.66e-10!52;UBERON:0006241!4.66e-10!52;UBERON:0007135!4.66e-10!52;UBERON:0003080!1.06e-09!40;UBERON:0002780!2.90e-09!39;UBERON:0001890!2.90e-09!39;UBERON:0006240!2.90e-09!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.53e-17,73;UBERON:0001016,4.02e-16,75;UBERON:0000955,3.55e-15,47;UBERON:0006238,3.55e-15,47;UBERON:0002616,2.67e-14,46;UBERON:0004121,5.00e-14,95;UBERON:0000924,5.00e-14,95;UBERON:0006601,5.00e-14,95;UBERON:0002346,7.02e-14,64;UBERON:0003075,7.02e-14,64;UBERON:0007284,7.02e-14,64;UBERON:0000073,1.09e-13,54;UBERON:0003056,2.11e-13,49;UBERON:0003080,2.12e-13,40;UBERON:0002780,1.21e-12,39;UBERON:0001890,1.21e-12,39;UBERON:0006240,1.21e-12,39;UBERON:0001049,1.55e-12,52;UBERON:0005068,1.55e-12,52;UBERON:0006241,1.55e-12,52;UBERON:0007135,1.55e-12,52;UBERON:0010371,7.18e-11,73;UBERON:0003528,6.55e-08,29;UBERON:0002791,6.55e-08,29;UBERON:0001893,6.55e-08,29;UBERON:0010314,2.99e-07,92 | |||
|phase1_expression=0.160148847104794,1.39590163055744,1.36499771816861,2.72217790176147,2.00358291978539,0.503637815735669,0.467225281191051,2.45334314538995,0.563154888606667,0.70219357896598,0.171217968225505,0.239316476986009,2.56801094896809,2.09808965805594,0,0,0,0.473193248037357,0.411343300817216,0,0.595303031057488,0.198581902401771,0.522399578277871,0,0.45881856213434,1.72269589234506,1.7230479846363,0.430942465371778,0,0.252030129759931,0,0,0,0,5.48818077527422,1.49611180822643,3.06254034393554,0,0,0.523523743973798,0.588231488031014,0,0,0.377690453926732,0.506884656097573,0.550640256485045,0,0.218025156380447,0.219686182734472,0.58328969722285,0.139986421625363,0,1.34226084846189,3.62681071005672,1.00828139742739,0,0.573066879877513,0,0.809265843438391,1.05798195854407,2.53532561402472,0,0,0,0,0,0.299600110518405,0.384218305321555,0.829516898467821,1.35005938331691,1.89292465216244,0.571301968807607,0.220868540951614,1.83736198822431,1.53352753629178,0.919218786610021,1.10115880999389,1.40456071893706,1.0752457327937,1.45074916503213,1.55528994124096,0.52091337055676,3.35019598801657,1.12552522006336,0.763991238884051,0.589257170947335,0.711858403995515,0.372798891650601,0.075726193333184,0,15.6526823898906,0.860423876981386,0.679971333707751,0,0.649776417447669,1.34408066129201,0.561777680527007,0.681721290312231,0.519572009205738,1.06001872353102,0.845060518660083,0,0,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,0.742210695324124,0.173485326766136,0.608930956624282,0.922461989024234,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,3.51336956413857,1.8850203613211,0.510914110417183,0.239630249011841,0,0.127070227073065,1.49790639404823,2.74500361691176,1.63350657746724,2.43354048269187,1.53429274398198,1.0389402227978,0.648965052271031,0.203678727700633,0.373220911830279,0.758168275301024,0.210441855886474,0.780722657776222,0.689706313300419,0.900310649026746,1.05493372485001,0.95251098811859,2.17793324484245,1.03071897015702,1.29351685369508,0.862271971731369,0.756424320671277,1.23165786914764,0.43839146485515,1.11218899690239,0.696504333044333,0.205782136407943,1.19420560091096,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.329119699826961,0.656669856316381,0.405344047729279,1.46199987425332,0.439100230582101,0.805238512562231,1.47202963994889,1.44066457330998,0.330418782983798,0.793351699990633,0.213288250535234,0.232236671860439,0.128867461322093,0,0.444756087689741,0,1.42358718463353,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0.758671603812327,0.228497025219458,2.25415471346161,0.610953983535943,0.775809948670503,0.49095073923223,0.252946148497029,0.147610147979602,0.784993639206874,1.35736880313981,0.296452627087149,0,0,0,0,0.72353147925725,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0.757736633841335,0.717589654087649,1.4473305640901,0.739012760666419,0.189491411770485,0,0,0.469380496577004,0.670025029767263,1.19021820443007,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.275936746304732,1.28440471990234,0.937693492737625,0.163934945376675,1.26235463602186,0,1.95219372148319,1.29254038639679,0.716906393857656,1.33679204449436,1.69845918473299,1.21443210502468,0.584511715822624,1.58115111178609,1.92792789853084,0.283880170416537,0.35613120733451,0.651547837414304,1.31976098378028,0,0.242780636154981,0,0.377210159511796,0.885905678642318,0.922305443831782,0.258428293168221,0.727067458955011,0,0.316036757935816,0,1.03135543248187,4.08527526904546,0.18006109403131,1.55230420539305,1.28602221018955,1.77340233642274,1.07021290561242,1.97458824722545,2.13125464380219,0,0.21183207086382,0,0.65954501176592,0,0.180938774784468,0.119372344003136,0.164140899745061,0,1.11255181206306,0.683483523191411,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,1.5298058699447,0.979660166265606,0.967399816630967,0,0.316335993581135,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.259229946583586,1.24267862617385,0.56369293868419,0.149516546043979,0,0,0.516639293910924,0.844780627453891,0.821500670520278,0.2604087696879,0.209718688851422,0.724752362478018,0.288030006257865,3.47612232690996,0.405450430580328,0.205421914329655,0.25984164595559,0.716106782669926,0.39736270956253,0.600977247599844,0.295379054349154,0.908698049533329,0.381034033274999,0.302478555410522,0.584747284438515,1.05833025804362,1.16876902181569,0.906921534460845,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,2.29158205375759,1.54667864109319,0.685082519770642,1.5107877947794,0,1.35096360967266,0.453142408984205,0.51776031175182,1.45302286617847,0.399024873401031,0.682934423016537,0.729320151204882,1.25767897576789,0.1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| |phase1_expression=0.160148847104794,1.39590163055744,1.36499771816861,2.72217790176147,2.00358291978539,0.503637815735669,0.467225281191051,2.45334314538995,0.563154888606667,0.70219357896598,0.171217968225505,0.239316476986009,2.56801094896809,2.09808965805594,0,0,0,0.473193248037357,0.411343300817216,0,0.595303031057488,0.198581902401771,0.522399578277871,0,0.45881856213434,1.72269589234506,1.7230479846363,0.430942465371778,0,0.252030129759931,0,0,0,0,5.48818077527422,1.49611180822643,3.06254034393554,0,0,0.523523743973798,0.588231488031014,0,0,0.377690453926732,0.506884656097573,0.550640256485045,0,0.218025156380447,0.219686182734472,0.58328969722285,0.139986421625363,0,1.34226084846189,3.62681071005672,1.00828139742739,0,0.573066879877513,0,0.809265843438391,1.05798195854407,2.53532561402472,0,0,0,0,0,0.299600110518405,0.384218305321555,0.829516898467821,1.35005938331691,1.89292465216244,0.571301968807607,0.220868540951614,1.83736198822431,1.53352753629178,0.919218786610021,1.10115880999389,1.40456071893706,1.0752457327937,1.45074916503213,1.55528994124096,0.52091337055676,3.35019598801657,1.12552522006336,0.763991238884051,0.589257170947335,0.711858403995515,0.372798891650601,0.075726193333184,0,15.6526823898906,0.860423876981386,0.679971333707751,0,0.649776417447669,1.34408066129201,0.561777680527007,0.681721290312231,0.519572009205738,1.06001872353102,0.845060518660083,0,0,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,0.742210695324124,0.173485326766136,0.608930956624282,0.922461989024234,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,3.51336956413857,1.8850203613211,0.510914110417183,0.239630249011841,0,0.127070227073065,1.49790639404823,2.74500361691176,1.63350657746724,2.43354048269187,1.53429274398198,1.0389402227978,0.648965052271031,0.203678727700633,0.373220911830279,0.758168275301024,0.210441855886474,0.780722657776222,0.689706313300419,0.900310649026746,1.05493372485001,0.95251098811859,2.17793324484245,1.03071897015702,1.29351685369508,0.862271971731369,0.756424320671277,1.23165786914764,0.43839146485515,1.11218899690239,0.696504333044333,0.205782136407943,1.19420560091096,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.329119699826961,0.656669856316381,0.405344047729279,1.46199987425332,0.439100230582101,0.805238512562231,1.47202963994889,1.44066457330998,0.330418782983798,0.793351699990633,0.213288250535234,0.232236671860439,0.128867461322093,0,0.444756087689741,0,1.42358718463353,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0.758671603812327,0.228497025219458,2.25415471346161,0.610953983535943,0.775809948670503,0.49095073923223,0.252946148497029,0.147610147979602,0.784993639206874,1.35736880313981,0.296452627087149,0,0,0,0,0.72353147925725,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0.757736633841335,0.717589654087649,1.4473305640901,0.739012760666419,0.189491411770485,0,0,0.469380496577004,0.670025029767263,1.19021820443007,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.275936746304732,1.28440471990234,0.937693492737625,0.163934945376675,1.26235463602186,0,1.95219372148319,1.29254038639679,0.716906393857656,1.33679204449436,1.69845918473299,1.21443210502468,0.584511715822624,1.58115111178609,1.92792789853084,0.283880170416537,0.35613120733451,0.651547837414304,1.31976098378028,0,0.242780636154981,0,0.377210159511796,0.885905678642318,0.922305443831782,0.258428293168221,0.727067458955011,0,0.316036757935816,0,1.03135543248187,4.08527526904546,0.18006109403131,1.55230420539305,1.28602221018955,1.77340233642274,1.07021290561242,1.97458824722545,2.13125464380219,0,0.21183207086382,0,0.65954501176592,0,0.180938774784468,0.119372344003136,0.164140899745061,0,1.11255181206306,0.683483523191411,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,1.5298058699447,0.979660166265606,0.967399816630967,0,0.316335993581135,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.259229946583586,1.24267862617385,0.56369293868419,0.149516546043979,0,0,0.516639293910924,0.844780627453891,0.821500670520278,0.2604087696879,0.209718688851422,0.724752362478018,0.288030006257865,3.47612232690996,0.405450430580328,0.205421914329655,0.25984164595559,0.716106782669926,0.39736270956253,0.600977247599844,0.295379054349154,0.908698049533329,0.381034033274999,0.302478555410522,0.584747284438515,1.05833025804362,1.16876902181569,0.906921534460845,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,2.29158205375759,1.54667864109319,0.685082519770642,1.5107877947794,0,1.35096360967266,0.453142408984205,0.51776031175182,1.45302286617847,0.399024873401031,0.682934423016537,0.729320151204882,1.25767897576789,0.1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| ||
|short_description=p@chr6:48504716..48504730,- | |||
}} | }} |
Latest revision as of 19:54, 5 August 2015
Short description: | p@chr6:48504716..48504730, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48504716..48504730, - |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.30e-07 | 33 |
neuronal stem cell | 2.30e-07 | 33 |
neuroblast | 2.30e-07 | 33 |
electrically signaling cell | 2.30e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.53e-17 | 73 |
nervous system | 4.02e-16 | 75 |
brain | 3.55e-15 | 47 |
future brain | 3.55e-15 | 47 |
regional part of brain | 2.67e-14 | 46 |
ectoderm-derived structure | 5.00e-14 | 95 |
ectoderm | 5.00e-14 | 95 |
presumptive ectoderm | 5.00e-14 | 95 |
neurectoderm | 7.02e-14 | 64 |
neural plate | 7.02e-14 | 64 |
presumptive neural plate | 7.02e-14 | 64 |
regional part of nervous system | 1.09e-13 | 54 |
pre-chordal neural plate | 2.11e-13 | 49 |
anterior neural tube | 2.12e-13 | 40 |
regional part of forebrain | 1.21e-12 | 39 |
forebrain | 1.21e-12 | 39 |
future forebrain | 1.21e-12 | 39 |
neural tube | 1.55e-12 | 52 |
neural rod | 1.55e-12 | 52 |
future spinal cord | 1.55e-12 | 52 |
neural keel | 1.55e-12 | 52 |
ecto-epithelium | 7.18e-11 | 73 |
brain grey matter | 6.55e-08 | 29 |
regional part of telencephalon | 6.55e-08 | 29 |
telencephalon | 6.55e-08 | 29 |
structure with developmental contribution from neural crest | 2.99e-07 | 92 |