FFCP PHASE1:Mm9::chr6:48658173..48658202,-: Difference between revisions
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{{FFCP|EntrezGene=231931|HGNC=|MCL_coexpression_id=102|UniProt=|association_with_transcript=0bp_to_ENSMUST00000126422_5end|description=CAGE_peak_2_at_Gimap6_5end|id=chr6:48658173..48658202,-|ontology_enrichment_celltype=CL:0000791!3.74e-07!9;CL:0000789!3.74e-07!9;CL:0002420!3.74e-07!9;CL:0002419!3.74e-07!9;CL:0000790!3.74e-07!9;CL:0000838!7.27e-07!12|ontology_enrichment_celltype_v019_2=CL:0000791,3.15e-07,9;CL:0000789,3.15e-07,9;CL:0002420,3.15e-07,9;CL:0002419,3.15e-07,9;CL:0000790,3.15e-07,9;CL:0000838,6.16e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!9.34e-14!193;UBERON:0004120!9.34e-14!193;UBERON:0006603!9.34e-14!193;UBERON:0001048!7.20e-11!147;UBERON:0001041!7.20e-11!92;UBERON:0003104!7.96e-11!131;UBERON:0009142!7.96e-11!131;UBERON:0000077!8.26e-10!97;UBERON:0009569!1.17e-08!66;UBERON:0001004!2.17e-08!42;UBERON:0000065!3.29e-08!41;UBERON:0005177!4.89e-08!85;UBERON:0004177!4.97e-08!29;UBERON:0000949!2.90e-07!72;UBERON:0001007!6.06e-07!128;UBERON:0001555!6.06e-07!128;UBERON:0007026!6.06e-07!128;UBERON:0005057!8.32e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.25e-10,79;UBERON:0001041,9.96e-10,80;UBERON:0009569,6.37e-09,66;UBERON:0001004,7.04e-09,42;UBERON:0001048,8.11e-09,134;UBERON:0000065,1.07e-08,41;UBERON:0004177,2.41e-08,29;UBERON:0005057,2.41e-08,29;UBERON:0000949,1.73e-07,72;UBERON:0000077,6.99e-07,35|phase1_expression=0.480446541314382,0,0,0,0,0,0,114.790634539561,248.210517153388,88.7104554760355,57.5292373237697,15.7151153220813,169.146321172031,115.394931193077,11.6588416635482,16.4004966585759,5.59649502502517,99.0551199224866,95.020302488777,94.6388923509607,5.44277056966847,4.66667470644161,2.87319768052829,4.47978783821539,8.48814339948529,0,0,0,1.14014051673824,2.52030129759931,1.55211357458713,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,116.776693816185,228.489074733573,173.760494156654,1.02903774414379,1.14613375975503,1.03134418455488,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0,0.933206510776299,1.89008313664367,0.841299845405528,0,1.76694832761291,0.489963196859816,0.575072826109418,0,0,1.27687338085188,0.307213066512487,0.395658863190582,0.365950574409639,0.52091337055676,0.558365998002762,0,0.61119299110724,0.294628585473668,1.42371680799103,1.3047961207771,1.74170244666323,0.453429360640713,116.235659969373,28.3939879403858,0,0,0.649776417447669,1.34408066129201,7.44355426698285,0,0,0,0,0,0,0,0,0,0,8.44960709921044,77.9403029777987,11.4300447079915,6.07198643681475,8.22056791442781,5.30415643688935,10.399862198131,11.6412820064348,12.8179923156269,1.97755974187499,13.013942122792,1.76922110389975,7.44127509758082,6.8460870722722,8.24287930329878,5.59175283654366,0.878342391034642,1.04723353406728,3.83185582812887,45.6495624367556,10.7982491578813,20.3312363316904,1.3481157546434,0.915001205637253,0.753926112677186,0.695297280769106,0.767146371990992,0.83115217823824,1.1356888414743,6.41587992256993,9.70374370758726,1.26361379216837,1.26265113531884,3.12289063110489,1.83921683546778,1.98068342785884,2.71268672104287,2.38127747029647,2.0498195245576,2.06143794031403,4.65666067330228,2.37124792226126,2.26927296201383,3.34307135911503,5.91828477554452,3.33656699070717,5.57203466435466,4.32142486456681,4.77682240364384,0.702213187313235,0.772043721344145,1.42081749697796,3.52113813310353,3.28336483973535,5.76198596675248,6.39210786080068,6.88674811115913,6.01641740260775,9.30135779001631,9.65784245038629,11.9100649214513,8.72167204541446,25.938459324497,23.9152988160274,21.6375981389492,17.564009223284,21.3388205828991,1.05144974282064,1.9551876352064,5.94753809370836,2.11560453330835,2.13288250535234,3.48355007790658,4.76809606891745,4.03367049246685,4.22518283305254,4.56541502670142,6.16887780007865,5.59976446061637,6.28338022000674,7.16243299348143,6.62877896205008,4.49409704327111,4.10662294761919,5.57595565112228,6.63837653335786,6.62641373136427,2.25415471346161,8.96065842519383,11.2492442557223,14.4479788974056,16.0620804295614,16.8275568696746,16.6418651511857,14.5608653427725,6.52195779591728,2.50267658574141,2.16214894624523,1.57403478669398,1.01430060694251,2.65294875727659,2.80088436959562,4.31544206176216,9.24170792617702,4.66754402419738,15.814502718009,8.55924179637558,9.67316786655138,8.08252409430758,6.81710171383266,7.71909634181387,29.0062508561569,3.7898282354097,5.70377417547091,4.58311731593008,10.5610611729826,14.7405506548798,15.7108802984769,13.8544889979037,15.9211495547253,26.7972274475018,23.4398509926506,36.2137925521781,36.9545861193017,36.8855099382855,0,0,8.85175691434265,8.82997588175144,1.12385412991454,2.10981035865966,0,15.4007265594668,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,1.28528526568723,3.83238230062325,5.1639025063504,7.16702621155735,5.27904393512113,2.65490276679926,2.18502572539483,5.13950046840077,5.28094223316515,6.79194353625777,8.9156192903739,9.30341855405596,11.6330793432802,8.9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:231931 | |||
|HGNC= | |||
|MCL_coexpression_id=102 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000126422_5end | |||
|cluster_id=chr6:48658173..48658202,- | |||
|description=CAGE_peak_2_at_Gimap6_5end | |||
|id=chr6:48658173..48658202,- | |||
|ontology_enrichment_celltype=CL:0000791!3.74e-07!9;CL:0000789!3.74e-07!9;CL:0002420!3.74e-07!9;CL:0002419!3.74e-07!9;CL:0000790!3.74e-07!9;CL:0000838!7.27e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.15e-07,9;CL:0000789,3.15e-07,9;CL:0002420,3.15e-07,9;CL:0002419,3.15e-07,9;CL:0000790,3.15e-07,9;CL:0000838,6.16e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.34e-14!193;UBERON:0004120!9.34e-14!193;UBERON:0006603!9.34e-14!193;UBERON:0001048!7.20e-11!147;UBERON:0001041!7.20e-11!92;UBERON:0003104!7.96e-11!131;UBERON:0009142!7.96e-11!131;UBERON:0000077!8.26e-10!97;UBERON:0009569!1.17e-08!66;UBERON:0001004!2.17e-08!42;UBERON:0000065!3.29e-08!41;UBERON:0005177!4.89e-08!85;UBERON:0004177!4.97e-08!29;UBERON:0000949!2.90e-07!72;UBERON:0001007!6.06e-07!128;UBERON:0001555!6.06e-07!128;UBERON:0007026!6.06e-07!128;UBERON:0005057!8.32e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.25e-10,79;UBERON:0001041,9.96e-10,80;UBERON:0009569,6.37e-09,66;UBERON:0001004,7.04e-09,42;UBERON:0001048,8.11e-09,134;UBERON:0000065,1.07e-08,41;UBERON:0004177,2.41e-08,29;UBERON:0005057,2.41e-08,29;UBERON:0000949,1.73e-07,72;UBERON:0000077,6.99e-07,35 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,114.790634539561,248.210517153388,88.7104554760355,57.5292373237697,15.7151153220813,169.146321172031,115.394931193077,11.6588416635482,16.4004966585759,5.59649502502517,99.0551199224866,95.020302488777,94.6388923509607,5.44277056966847,4.66667470644161,2.87319768052829,4.47978783821539,8.48814339948529,0,0,0,1.14014051673824,2.52030129759931,1.55211357458713,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,116.776693816185,228.489074733573,173.760494156654,1.02903774414379,1.14613375975503,1.03134418455488,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0,0.933206510776299,1.89008313664367,0.841299845405528,0,1.76694832761291,0.489963196859816,0.575072826109418,0,0,1.27687338085188,0.307213066512487,0.395658863190582,0.365950574409639,0.52091337055676,0.558365998002762,0,0.61119299110724,0.294628585473668,1.42371680799103,1.3047961207771,1.74170244666323,0.453429360640713,116.235659969373,28.3939879403858,0,0,0.649776417447669,1.34408066129201,7.44355426698285,0,0,0,0,0,0,0,0,0,0,8.44960709921044,77.9403029777987,11.4300447079915,6.07198643681475,8.22056791442781,5.30415643688935,10.399862198131,11.6412820064348,12.8179923156269,1.97755974187499,13.013942122792,1.76922110389975,7.44127509758082,6.8460870722722,8.24287930329878,5.59175283654366,0.878342391034642,1.04723353406728,3.83185582812887,45.6495624367556,10.7982491578813,20.3312363316904,1.3481157546434,0.915001205637253,0.753926112677186,0.695297280769106,0.767146371990992,0.83115217823824,1.1356888414743,6.41587992256993,9.70374370758726,1.26361379216837,1.26265113531884,3.12289063110489,1.83921683546778,1.98068342785884,2.71268672104287,2.38127747029647,2.0498195245576,2.06143794031403,4.65666067330228,2.37124792226126,2.26927296201383,3.34307135911503,5.91828477554452,3.33656699070717,5.57203466435466,4.32142486456681,4.77682240364384,0.702213187313235,0.772043721344145,1.42081749697796,3.52113813310353,3.28336483973535,5.76198596675248,6.39210786080068,6.88674811115913,6.01641740260775,9.30135779001631,9.65784245038629,11.9100649214513,8.72167204541446,25.938459324497,23.9152988160274,21.6375981389492,17.564009223284,21.3388205828991,1.05144974282064,1.9551876352064,5.94753809370836,2.11560453330835,2.13288250535234,3.48355007790658,4.76809606891745,4.03367049246685,4.22518283305254,4.56541502670142,6.16887780007865,5.59976446061637,6.28338022000674,7.16243299348143,6.62877896205008,4.49409704327111,4.10662294761919,5.57595565112228,6.63837653335786,6.62641373136427,2.25415471346161,8.96065842519383,11.2492442557223,14.4479788974056,16.0620804295614,16.8275568696746,16.6418651511857,14.5608653427725,6.52195779591728,2.50267658574141,2.16214894624523,1.57403478669398,1.01430060694251,2.65294875727659,2.80088436959562,4.31544206176216,9.24170792617702,4.66754402419738,15.814502718009,8.55924179637558,9.67316786655138,8.08252409430758,6.81710171383266,7.71909634181387,29.0062508561569,3.7898282354097,5.70377417547091,4.58311731593008,10.5610611729826,14.7405506548798,15.7108802984769,13.8544889979037,15.9211495547253,26.7972274475018,23.4398509926506,36.2137925521781,36.9545861193017,36.8855099382855,0,0,8.85175691434265,8.82997588175144,1.12385412991454,2.10981035865966,0,15.4007265594668,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,1.28528526568723,3.83238230062325,5.1639025063504,7.16702621155735,5.27904393512113,2.65490276679926,2.18502572539483,5.13950046840077,5.28094223316515,6.79194353625777,8.9156192903739,9.30341855405596,11.6330793432802,8.91243445961803,7.9009189483954,5.27093042874994,6.18813259489121,1.36175842301515,2.70091641046965,3.36332577835162,3.85806663056866,4.61084607469911,3.38900753443934,6.2528627828806,4.56697423671899,2.81606049676452,1.48282449604674,0.882113592219848,3.62749756471256,5.48979050766079,3.43783672090488,3.46179797609096,3.11867709515616,6.70405924248657,0.741701208042039,19.4792804109552,11.3512777379772,10.1856990053341,13.5625289043378,17.2234726928492,21.0475919350001,120.174750005656,96.4265506510004,103.511780379513,3.81868247206045,2.53068794864908,4.06638934253697,4.96824567780286,6.89991376847747,3.71216358368502,2.42755823492677,5.20716771069616,3.40282724579238,3.88844919875379,6.83473244395618,0.56369293868419,5.98066184175915,3.47462829959905,2.52786544847262,3.09983576346555,5.74450826668646,5.8678619322877,1.17183946359555,1.36317147753424,0.966336483304024,1.15212002503146,21.8047673233443,3.44632865993279,3.59488350076895,3.63778304337826,5.19177417435696,12.715606706001,23.7986990049538,20.2334652229171,22.3135854385406,18.59446082382,24.1982844328417,28.0678696530487,33.866568257396,46.1663763617197,7.70883304291719,0,0,0,4.056981474676,7.69498149349846,4.39563898241436,1.07184189539533,3.51100472824754,1.12950368523413,1.38097570952153,0,1.71853182343688,0,0,0,0.45032120322422,0.906284817968409,1.03552062350364,1.24544817101012,0.798049746802062,2.21953687480374,2.1879604536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| |||
|short_description=p2@Gimap6 | |||
}} |
Revision as of 20:17, 5 August 2015
Short description: | p2@Gimap6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gimap6_5end |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | 0bp_to_ENSMUST00000126422_5end |
EntrezGene: | 231931 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.15e-07 | 9 |
alpha-beta T cell | 3.15e-07 | 9 |
immature T cell | 3.15e-07 | 9 |
mature T cell | 3.15e-07 | 9 |
immature alpha-beta T cell | 3.15e-07 | 9 |
lymphoid lineage restricted progenitor cell | 6.16e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.25e-10 | 79 |
foregut | 9.96e-10 | 80 |
subdivision of trunk | 6.37e-09 | 66 |
respiratory system | 7.04e-09 | 42 |
primordium | 8.11e-09 | 134 |
respiratory tract | 1.07e-08 | 41 |
hemopoietic organ | 2.41e-08 | 29 |
immune organ | 2.41e-08 | 29 |
endocrine system | 1.73e-07 | 72 |
mixed endoderm/mesoderm-derived structure | 6.99e-07 | 35 |